BLASTX nr result

ID: Coptis25_contig00002580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002580
         (1647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526765.1| Makorin-1, putative [Ricinus communis] gi|22...   542   e-151
ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makor...   528   e-147
ref|XP_002314030.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_003546878.1| PREDICTED: E3 ubiquitin-protein ligase makor...   508   e-141
ref|XP_003599126.1| E3 ubiquitin-protein ligase makorin [Medicag...   507   e-141

>ref|XP_002526765.1| Makorin-1, putative [Ricinus communis] gi|223533892|gb|EEF35619.1|
            Makorin-1, putative [Ricinus communis]
          Length = 361

 Score =  542 bits (1396), Expect = e-151
 Identities = 257/361 (71%), Positives = 292/361 (80%), Gaps = 9/361 (2%)
 Frame = +2

Query: 113  MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVXXXXXX 292
            MSKRVLCKFFAHGACLKG+HCEFSHDWKD  NN+CT+YQKG+CSYGSRCRYEHV      
Sbjct: 1    MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGICSYGSRCRYEHVKPLRSD 60

Query: 293  XXXXXXXXXXXXKAVEVTCPSKISVGAEVNANLSIHV---ELSALSSPFFPP---AWKQD 454
                         A   + P   SV    +   S+H    ELSA  +PFFPP   AW  D
Sbjct: 61   SASSSSTVSYQSLA-STSIPLVHSVRTGSSRLTSVHNASGELSASRNPFFPPSNPAWNLD 119

Query: 455  SGEQNFPDDDIV---GNLRDVDRPICSFAAAGNCPRGDRCPHIHGDLCPTCEKYCLHPYR 625
            SG  N  ++  +    N++  D P+CSFAAAGNCPRGD+CPH+HGDLCPTC K CLHP+R
Sbjct: 120  SGPNNLLENGEIIEPRNVKPEDHPLCSFAAAGNCPRGDKCPHVHGDLCPTCGKNCLHPFR 179

Query: 626  PDEREEHSIMCGKKKQHLDALKHSQEIECSVCLDRVLSKPSAAERKFGLLSECDHPFCIS 805
            P+EREEH   C KK++HL+ALKHSQEIECSVCLDRVLSKP+AAERKFGLLSECDHPFCIS
Sbjct: 180  PEEREEHLRTCEKKQKHLEALKHSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCIS 239

Query: 806  CIRNWRSNSPTSGMDVNSALRACPICRKLSYFVIPSVIWYSTLEEKQEIVDNYKARLGSI 985
            CIRNWRS+SPTSGMDVN+ALRACPICRKLSYFV+PSVIWYS+ EEKQEIVD+YKA+L SI
Sbjct: 240  CIRNWRSSSPTSGMDVNTALRACPICRKLSYFVVPSVIWYSSKEEKQEIVDSYKAKLSSI 299

Query: 986  DCRYFDFGNGSCPFGTSCFYKHAYRDGRLEEVALRHLGAEDGNTVIAKDIRLSDFLSNLR 1165
            DC++FDFGNG+CPFGTSCFYKHA+RDGRLEEVALRHLGAEDG TVIAKDIRLSDFL +L+
Sbjct: 300  DCKHFDFGNGNCPFGTSCFYKHAFRDGRLEEVALRHLGAEDGQTVIAKDIRLSDFLGSLQ 359

Query: 1166 L 1168
            +
Sbjct: 360  I 360


>ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Vitis vinifera]
          Length = 361

 Score =  528 bits (1359), Expect = e-147
 Identities = 253/362 (69%), Positives = 287/362 (79%), Gaps = 9/362 (2%)
 Frame = +2

Query: 113  MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVXXXXXX 292
            MSKRV CKFFAHGACLKGDHCEFSHDWK   NN+CTFYQKGVCSYG RCRYEHV      
Sbjct: 1    MSKRVQCKFFAHGACLKGDHCEFSHDWKASPNNICTFYQKGVCSYGGRCRYEHVKVSHSQ 60

Query: 293  XXXXXXXXXXXXKAV----EVTCPSKISVGAEVNANLSIHVELSALSSPFFPP---AWKQ 451
                          V     +T PS+      + A   +  E SA S P FPP   AW Q
Sbjct: 61   PSAPSSSTSSHQLLVPDSASLTHPSRTVTNGLIPAP-GVPPEPSASSRPLFPPTQPAWNQ 119

Query: 452  DSGEQNFPDDDIVGNLRD--VDRPICSFAAAGNCPRGDRCPHIHGDLCPTCEKYCLHPYR 625
            +SG+Q+F +++I     D   D+ ICSFAAAG+CPRG++CPHIHGDLCPTC K+CLHP+R
Sbjct: 120  ESGDQDFLENNIGEPRTDRPADQSICSFAAAGSCPRGEKCPHIHGDLCPTCGKHCLHPFR 179

Query: 626  PDEREEHSIMCGKKKQHLDALKHSQEIECSVCLDRVLSKPSAAERKFGLLSECDHPFCIS 805
            P+E EEH   C KK++HL+ALKHSQEIECSVCLDRVLSKP+AAERKFGLLSECDHPFCIS
Sbjct: 180  PEEIEEHLRTCEKKQKHLEALKHSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCIS 239

Query: 806  CIRNWRSNSPTSGMDVNSALRACPICRKLSYFVIPSVIWYSTLEEKQEIVDNYKARLGSI 985
            CIRNWRS+SP SGMD+N+ALRACPICRKLSYFVIPSVIWYST EEKQEIVD+YKA+L SI
Sbjct: 240  CIRNWRSSSPASGMDINTALRACPICRKLSYFVIPSVIWYSTKEEKQEIVDSYKAKLRSI 299

Query: 986  DCRYFDFGNGSCPFGTSCFYKHAYRDGRLEEVALRHLGAEDGNTVIAKDIRLSDFLSNLR 1165
            DC++FDFGNG+CPFGTSCFYKHAYRDGRLEEV LRHLGAEDG+ +IAK+IRLSDFL  L 
Sbjct: 300  DCKHFDFGNGTCPFGTSCFYKHAYRDGRLEEVVLRHLGAEDGHVMIAKNIRLSDFLGGLH 359

Query: 1166 LR 1171
            +R
Sbjct: 360  IR 361


>ref|XP_002314030.1| predicted protein [Populus trichocarpa] gi|222850438|gb|EEE87985.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  516 bits (1329), Expect = e-144
 Identities = 245/361 (67%), Positives = 287/361 (79%), Gaps = 8/361 (2%)
 Frame = +2

Query: 113  MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVXXXXXX 292
            MSKR+LCKFFAHGACLKG+HCEFSHDWKD  NN+CTFYQKG+C YGSRCRY+HV      
Sbjct: 1    MSKRLLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGICVYGSRCRYDHVKPSRPE 60

Query: 293  XXXXXXXXXXXXKAVEVTCPSKISVGAEVNANLSIHVELSALSSPFFPP---AWKQDSGE 463
                         +V +  P++ +V + V   L++  ELSA S PF  P   AW  +S +
Sbjct: 61   STASSSLTVLASTSVSLALPAR-TVSSGVRTVLAVPPELSASSRPFIAPSTPAWDLESVQ 119

Query: 464  QNFPDD---DIVG--NLRDVDRPICSFAAAGNCPRGDRCPHIHGDLCPTCEKYCLHPYRP 628
             +F +D   +++   N++  DR +CSFAAAG+CPRGD+CPHIHGDLC  C K+CLHP+RP
Sbjct: 120  LDFLEDGDGEVIQPRNVKPADRSLCSFAAAGSCPRGDKCPHIHGDLCAYCGKHCLHPFRP 179

Query: 629  DEREEHSIMCGKKKQHLDALKHSQEIECSVCLDRVLSKPSAAERKFGLLSECDHPFCISC 808
            DER EH   C KK+++LD LK+SQEIECSVCLDRVLSK +AAERKFGLLSEC+HPFCISC
Sbjct: 180  DERNEHLKACEKKQKNLDLLKYSQEIECSVCLDRVLSKLTAAERKFGLLSECNHPFCISC 239

Query: 809  IRNWRSNSPTSGMDVNSALRACPICRKLSYFVIPSVIWYSTLEEKQEIVDNYKARLGSID 988
            IRNWR +SPTSGMDVNS+LRACPICRKLSYFVIPSVIWYST EEKQEIVD YK +L SID
Sbjct: 240  IRNWRGSSPTSGMDVNSSLRACPICRKLSYFVIPSVIWYSTKEEKQEIVDTYKEKLRSID 299

Query: 989  CRYFDFGNGSCPFGTSCFYKHAYRDGRLEEVALRHLGAEDGNTVIAKDIRLSDFLSNLRL 1168
            C++FDFGNG+CPFGTSCFYKHAYRDGRLEEV LRHLGAEDG  VIAK+IRLSDFL  L++
Sbjct: 300  CKHFDFGNGNCPFGTSCFYKHAYRDGRLEEVVLRHLGAEDGQGVIAKNIRLSDFLGGLQI 359

Query: 1169 R 1171
            R
Sbjct: 360  R 360


>ref|XP_003546878.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Glycine max]
          Length = 363

 Score =  508 bits (1307), Expect = e-141
 Identities = 246/365 (67%), Positives = 275/365 (75%), Gaps = 12/365 (3%)
 Frame = +2

Query: 113  MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVXXXXXX 292
            MSKRVLCKFFAHGACLKG+HCEFSHDWKD  NN+CTFYQKGVC+YGSRCRY+HV      
Sbjct: 1    MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGVCAYGSRCRYDHVKASREQ 60

Query: 293  XXXXXXXXXXXXKAVEVTCPSKISVGAEVNANLSIHVELSALSSPFF---------PPAW 445
                          V  T     +  A  N  ++   E S   SP+F          P W
Sbjct: 61   SSAPSSSVTEPQTPVSDTVAFG-NTRATFNG-VATAAEFSLSRSPYFLPSEPAWNQEPVW 118

Query: 446  KQDSGEQNFPDDDIVGNL---RDVDRPICSFAAAGNCPRGDRCPHIHGDLCPTCEKYCLH 616
             Q+ G      +D VG        +  ICSFAAAGNCPRG++CPHIHGDLCPTC K+CLH
Sbjct: 119  NQEFGYNEPLGEDNVGQTIITSPSELSICSFAAAGNCPRGEKCPHIHGDLCPTCGKHCLH 178

Query: 617  PYRPDEREEHSIMCGKKKQHLDALKHSQEIECSVCLDRVLSKPSAAERKFGLLSECDHPF 796
            P+RP+EREEH   C  K +HLDALK SQEIECSVCL+ VLSKP+AAE KFGLLSECDHPF
Sbjct: 179  PFRPEEREEHMKSCENKHKHLDALKRSQEIECSVCLELVLSKPTAAECKFGLLSECDHPF 238

Query: 797  CISCIRNWRSNSPTSGMDVNSALRACPICRKLSYFVIPSVIWYSTLEEKQEIVDNYKARL 976
            CISCIRNWRS++PT GMDVNS LRACPICRKLSYFVIPSVIWYST EEKQEI+DNYKA+L
Sbjct: 239  CISCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVIPSVIWYSTTEEKQEIIDNYKAKL 298

Query: 977  GSIDCRYFDFGNGSCPFGTSCFYKHAYRDGRLEEVALRHLGAEDGNTVIAKDIRLSDFLS 1156
             SIDC++FDFG G+CPFGTSCFYKHAYRDGRLE+V LRHLGA DG+TVIAKDIRLSDFLS
Sbjct: 299  KSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEQVVLRHLGAADGDTVIAKDIRLSDFLS 358

Query: 1157 NLRLR 1171
            N+ LR
Sbjct: 359  NMHLR 363


>ref|XP_003599126.1| E3 ubiquitin-protein ligase makorin [Medicago truncatula]
            gi|355488174|gb|AES69377.1| E3 ubiquitin-protein ligase
            makorin [Medicago truncatula]
          Length = 420

 Score =  507 bits (1305), Expect = e-141
 Identities = 238/354 (67%), Positives = 280/354 (79%), Gaps = 7/354 (1%)
 Frame = +2

Query: 113  MSKRVLCKFFAHGACLKGDHCEFSHDWKDQSNNVCTFYQKGVCSYGSRCRYEHVXXXXXX 292
            MSKRVLCKFFAHGACLKG+HCEFSHDWK   NN+CTFYQKGVC+YGSRCRY+HV      
Sbjct: 1    MSKRVLCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASRAQ 60

Query: 293  XXXXXXXXXXXXKAVEVTCPSKISVGAEVNAN-LSIHVELSALSSPFFPP---AWKQDSG 460
                          V     S +     V +N ++   E S  S+PF  P   AW Q+S 
Sbjct: 61   SSTPSSSITEHQPLVS---ESAVLGNTRVTSNGVATAAEFSLFSTPFVLPSEQAWNQESA 117

Query: 461  EQNF-PDDDIVGNL--RDVDRPICSFAAAGNCPRGDRCPHIHGDLCPTCEKYCLHPYRPD 631
            + +F  +DD+V ++     + PICSFAAAGNCPRG++CPH+HGDLCP+C + CLHP+RP+
Sbjct: 118  QLDFLREDDVVQSVITSPSELPICSFAAAGNCPRGEQCPHVHGDLCPSCGRQCLHPFRPE 177

Query: 632  EREEHSIMCGKKKQHLDALKHSQEIECSVCLDRVLSKPSAAERKFGLLSECDHPFCISCI 811
            EREEH + C  K++HL+ALK SQEIECSVCL+RVLSKP+AAERKFGLLSECDHPFC+SCI
Sbjct: 178  EREEHMMSCRNKQKHLEALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPFCVSCI 237

Query: 812  RNWRSNSPTSGMDVNSALRACPICRKLSYFVIPSVIWYSTLEEKQEIVDNYKARLGSIDC 991
            RNWRS++PT GMDVNS LRACPICRKLSYFV+PSVIWY+T EEK EI+D YKA+L SIDC
Sbjct: 238  RNWRSSNPTLGMDVNSTLRACPICRKLSYFVVPSVIWYATSEEKMEIIDTYKAKLKSIDC 297

Query: 992  RYFDFGNGSCPFGTSCFYKHAYRDGRLEEVALRHLGAEDGNTVIAKDIRLSDFL 1153
            ++FDFG G+CPFGTSCFYKHAYRDGRLEEVALRHLGA DG+T+IAKDIRLSDFL
Sbjct: 298  KHFDFGEGNCPFGTSCFYKHAYRDGRLEEVALRHLGAADGDTIIAKDIRLSDFL 351


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