BLASTX nr result
ID: Coptis25_contig00002569
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002569
(1136 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634429.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 444 e-122
ref|XP_003523431.1| PREDICTED: F-box protein 7-like [Glycine max] 442 e-122
ref|NP_001239713.1| uncharacterized protein LOC100786704 [Glycin... 442 e-122
gb|AFK44794.1| unknown [Lotus japonicus] 439 e-121
ref|XP_004165186.1| PREDICTED: F-box protein 7-like [Cucumis sat... 439 e-121
>ref|XP_003634429.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein 7-like [Vitis
vinifera]
Length = 327
Score = 444 bits (1143), Expect = e-122
Identities = 221/325 (68%), Positives = 245/325 (75%), Gaps = 29/325 (8%)
Frame = -3
Query: 999 EADPLLGLRPWLVTQRPWLDLYGVHVKPVV------SKPNYDPALIHRCLPDELLFEIFV 838
EA+ L + VT RPWLDLYGVHV+PV SKP DPALIHRCLPDELL E+F
Sbjct: 14 EAESRLRTVQYFVTHRPWLDLYGVHVRPVAPFGSASSKPFVDPALIHRCLPDELLSEVFA 73
Query: 837 RMTPHGLGRGACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWRKMWL 658
RMTP+ LGR ACVCRKWRYTIRNPVFWR+ACLKAWQ SG +ENYKI+QS+YE SWRKMWL
Sbjct: 74 RMTPYTLGRAACVCRKWRYTIRNPVFWRSACLKAWQLSGVVENYKILQSRYESSWRKMWL 133
Query: 657 LRPRVRTDGIYVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQIVKDV 478
LRPRVRTDG+YVSRNTYI GVAEW++TNPVH+VCYFRY+RFFPSGRF YKNSSQ VKDV
Sbjct: 134 LRPRVRTDGLYVSRNTYIRAGVAEWRVTNPVHVVCYFRYIRFFPSGRFLYKNSSQKVKDV 193
Query: 477 AKSMTFHASKADSIPSRKREEADSVFSGHYTLLQDEVDAAFLYPGLHPTVLRLQLRLRGT 298
K M ASK AD VFSGHYTL D+++AA LYPG+ PTV R++LRLRGT
Sbjct: 194 VKCMNSRASK-----------ADCVFSGHYTLSDDKIEAAVLYPGMRPTVWRIRLRLRGT 242
Query: 297 MVGANNRMDIISLVTS-----------------------KETHNPDVPAVSHRRGLNPFV 187
GANNRMD++SLVTS ETHNPDVPAVSH+RGL FV
Sbjct: 243 TAGANNRMDLLSLVTSGVSDNEVNGPDEDILGVVEGWEEDETHNPDVPAVSHKRGLKAFV 302
Query: 186 FVPFEEVETSVLNLPVDKMDYYLPG 112
FVPFEEVETS LNLPVDKMDYY+ G
Sbjct: 303 FVPFEEVETSDLNLPVDKMDYYVAG 327
>ref|XP_003523431.1| PREDICTED: F-box protein 7-like [Glycine max]
Length = 329
Score = 442 bits (1137), Expect = e-122
Identities = 218/330 (66%), Positives = 252/330 (76%), Gaps = 31/330 (9%)
Frame = -3
Query: 1008 MNSEADPLLGLRP--WLVTQRPWLDLYGVHVKPVVS------KPNYDPALIHRCLPDELL 853
++SE + +L L + VT+RPWLDLYGV+V+PV +P DPALIHR LPDELL
Sbjct: 11 VSSELESVLRLETVNYFVTRRPWLDLYGVNVRPVAPVGSASRRPYVDPALIHRSLPDELL 70
Query: 852 FEIFVRMTPHGLGRGACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSW 673
FE+F RMTP+ LGR +CVCRKW+YTIRNPVFWR ACLKAWQ SG +ENY+I+QSKY+ SW
Sbjct: 71 FEVFARMTPYDLGRASCVCRKWKYTIRNPVFWRNACLKAWQLSGIVENYRILQSKYDGSW 130
Query: 672 RKMWLLRPRVRTDGIYVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQ 493
RKMWL RPR+RTDG+YVSRNTYI GVAEWKITNPVH+VCYFRY+RFFPSGRF YKNSSQ
Sbjct: 131 RKMWLSRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYLRFFPSGRFLYKNSSQ 190
Query: 492 IVKDVAKSMTFHASKADSIPSRKREEADSVFSGHYTLLQDEVDAAFLYPGLHPTVLRLQL 313
VKDVAK M F +SK AD VF GHYTL D+V+AA LYPG+ PTVLR++L
Sbjct: 191 KVKDVAKCMNFRSSK-----------ADCVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRL 239
Query: 312 RLRGTMVGANNRMDIISLVTS-----------------------KETHNPDVPAVSHRRG 202
R+RGT GANNRMD+ISLVTS ETHNPDVPAVSH+RG
Sbjct: 240 RIRGTTSGANNRMDLISLVTSGVNSSEASAPEEDILGVVEGWQDDETHNPDVPAVSHKRG 299
Query: 201 LNPFVFVPFEEVETSVLNLPVDKMDYYLPG 112
+ PFVFVPFEEVETSVLNLPV+KMDY++PG
Sbjct: 300 MTPFVFVPFEEVETSVLNLPVEKMDYFVPG 329
>ref|NP_001239713.1| uncharacterized protein LOC100786704 [Glycine max]
gi|255635177|gb|ACU17944.1| unknown [Glycine max]
Length = 329
Score = 442 bits (1137), Expect = e-122
Identities = 217/330 (65%), Positives = 252/330 (76%), Gaps = 31/330 (9%)
Frame = -3
Query: 1008 MNSEADPLLGLRP--WLVTQRPWLDLYGVHVKPVVS------KPNYDPALIHRCLPDELL 853
++SE + +L L+ + VT+RPWLDLYGV+V+PV +P DPALIHR LPDELL
Sbjct: 11 VSSELESVLRLKTVNYFVTRRPWLDLYGVNVRPVAPVGSASRRPYVDPALIHRSLPDELL 70
Query: 852 FEIFVRMTPHGLGRGACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSW 673
FE+F RMTP+ LG+ +CVCRKW+YTIRNPVFWR ACLKAWQ G +ENYKI+QSKY+ SW
Sbjct: 71 FEVFARMTPYDLGKASCVCRKWKYTIRNPVFWRNACLKAWQLFGIVENYKILQSKYDGSW 130
Query: 672 RKMWLLRPRVRTDGIYVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQ 493
RKMWLLRPR+RTDG+YVSRNTYI GVAEWKITNPVH+VCYFRY+RFFPSGRF YKNSSQ
Sbjct: 131 RKMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYLRFFPSGRFLYKNSSQ 190
Query: 492 IVKDVAKSMTFHASKADSIPSRKREEADSVFSGHYTLLQDEVDAAFLYPGLHPTVLRLQL 313
+KDVAK M F +SK D VF GHYTL D+V+AA LYPG+ PTVLR++L
Sbjct: 191 KIKDVAKCMNFRSSK-----------IDCVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRL 239
Query: 312 RLRGTMVGANNRMDIISLVTS-----------------------KETHNPDVPAVSHRRG 202
RLRGT GANNRMD+ISLVTS ETHNPDVPAVSH+RG
Sbjct: 240 RLRGTTTGANNRMDLISLVTSGVNSSEASAPEEDILGVVEGWQDDETHNPDVPAVSHKRG 299
Query: 201 LNPFVFVPFEEVETSVLNLPVDKMDYYLPG 112
+ PFVFVPFEEVETSVLNLPV+KMDY++PG
Sbjct: 300 MTPFVFVPFEEVETSVLNLPVEKMDYFVPG 329
>gb|AFK44794.1| unknown [Lotus japonicus]
Length = 329
Score = 439 bits (1130), Expect = e-121
Identities = 217/329 (65%), Positives = 250/329 (75%), Gaps = 31/329 (9%)
Frame = -3
Query: 1005 NSEADPLLGLRP--WLVTQRPWLDLYGVHVKPVVS------KPNYDPALIHRCLPDELLF 850
+SE + +L L+ + VT+RPWLDLYG+ V+PV KP D ALIHRCLPDELLF
Sbjct: 12 SSELESILRLKTVDYFVTRRPWLDLYGIKVRPVAPFGSISRKPYVDSALIHRCLPDELLF 71
Query: 849 EIFVRMTPHGLGRGACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWR 670
E+F RMTP+ +G+ +CVCRKW+YTIRNPVFWR ACLKAWQ SG +ENYKI+QSKY+ SWR
Sbjct: 72 EVFARMTPYDMGKASCVCRKWKYTIRNPVFWRHACLKAWQFSGVVENYKILQSKYDGSWR 131
Query: 669 KMWLLRPRVRTDGIYVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQI 490
KMWLLRPR+RTDG+YVSRNTYI GVAEWKITNPVH+VCYFRY+RFFPSGRF YKNSSQ
Sbjct: 132 KMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYIRFFPSGRFLYKNSSQK 191
Query: 489 VKDVAKSMTFHASKADSIPSRKREEADSVFSGHYTLLQDEVDAAFLYPGLHPTVLRLQLR 310
VKDV K M F +SK A+ VF G+YTL D+V+AA LYPGL PTVLR++LR
Sbjct: 192 VKDVVKCMNFRSSK-----------AECVFGGNYTLSDDKVEAAVLYPGLRPTVLRIRLR 240
Query: 309 LRGTMVGANNRMDIISLVTS-----------------------KETHNPDVPAVSHRRGL 199
LRGT GANNRMD+ISLVTS ETHNPDVPAVSH+RG+
Sbjct: 241 LRGTATGANNRMDLISLVTSGVNSSEASAPEEDILGVVDGWQDDETHNPDVPAVSHKRGM 300
Query: 198 NPFVFVPFEEVETSVLNLPVDKMDYYLPG 112
PFVFVPFEEVE SVLNLPV+KMDYY+PG
Sbjct: 301 APFVFVPFEEVEASVLNLPVEKMDYYVPG 329
>ref|XP_004165186.1| PREDICTED: F-box protein 7-like [Cucumis sativus]
Length = 327
Score = 439 bits (1128), Expect = e-121
Identities = 211/315 (66%), Positives = 241/315 (76%), Gaps = 29/315 (9%)
Frame = -3
Query: 969 WLVTQRPWLDLYGVHVKPVVS------KPNYDPALIHRCLPDELLFEIFVRMTPHGLGRG 808
+ VT+RPWLDLYGV+V+PV +P DPALIHRCLPDELLFE+F RMTP+ LGR
Sbjct: 24 YFVTKRPWLDLYGVNVRPVAPFGSSSRQPFVDPALIHRCLPDELLFEVFARMTPYDLGRA 83
Query: 807 ACVCRKWRYTIRNPVFWRTACLKAWQASGPIENYKIVQSKYEWSWRKMWLLRPRVRTDGI 628
+CVCRKWRYTIRNPVFWR ACLKAWQ SG +ENYK +QS Y+ SWRKMWLLRPR+RTDG+
Sbjct: 84 SCVCRKWRYTIRNPVFWRNACLKAWQLSGVVENYKFLQSMYDGSWRKMWLLRPRIRTDGL 143
Query: 627 YVSRNTYIHVGVAEWKITNPVHLVCYFRYMRFFPSGRFFYKNSSQIVKDVAKSMTFHASK 448
YVSRNTYI G+AEWKITNPVHLVCYFRY+RFFPSGRF YKNSSQ +KDVAK M F ASK
Sbjct: 144 YVSRNTYIRAGIAEWKITNPVHLVCYFRYIRFFPSGRFLYKNSSQKIKDVAKCMNFRASK 203
Query: 447 ADSIPSRKREEADSVFSGHYTLLQDEVDAAFLYPGLHPTVLRLQLRLRGTMVGANNRMDI 268
AD I F GHYTL D+V+AA LY G PTVLR+++RLRGT GANNRMD+
Sbjct: 204 ADCI-----------FGGHYTLSDDKVEAAVLYSGARPTVLRIRMRLRGTSTGANNRMDL 252
Query: 267 ISLVTS-----------------------KETHNPDVPAVSHRRGLNPFVFVPFEEVETS 157
++LVTS ETHNPDVPAVSH+RGL PF+FVPF++VETS
Sbjct: 253 LTLVTSGMNNNEVGDPEEDILGIVERWRDDETHNPDVPAVSHKRGLTPFIFVPFDQVETS 312
Query: 156 VLNLPVDKMDYYLPG 112
LNLPVDKMDY++PG
Sbjct: 313 ELNLPVDKMDYFVPG 327