BLASTX nr result

ID: Coptis25_contig00002564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002564
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein o...   294   3e-77
gb|ACU19863.1| unknown [Glycine max]                                  273   8e-71
ref|NP_001241051.1| uncharacterized protein LOC100792471 [Glycin...   270   5e-70
gb|AFK42767.1| unknown [Lotus japonicus]                              256   6e-66
gb|AET79248.1| hypothetical protein [Glycine max]                     256   1e-65

>ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
            carboxylase-like [Vitis vinifera]
            gi|297736542|emb|CBI25413.3| unnamed protein product
            [Vitis vinifera]
          Length = 288

 Score =  294 bits (752), Expect = 3e-77
 Identities = 158/296 (53%), Positives = 201/296 (67%), Gaps = 14/296 (4%)
 Frame = +1

Query: 160  MDSVPLLRSFHCSLGTVTHVQAMLEKPGLIPMCNATSNKS--------PLAGRLSFSPVT 315
            M+SV +LRS H S+G +++V++ +E+P ++PM NAT   S         + G+L  SP+ 
Sbjct: 1    MESVAVLRSVHYSVGAISNVRSFIERPTMVPMYNATWPTSNTLHVQGLTVGGKLISSPIK 60

Query: 316  RKGTLLPCFKXXXXXXXXXXXXXXXLDSNSNGPVAKKSVNGAIFPKGFEELVLEVCDETD 495
            +KGTL+ C K                D N  G + K ++  A FP GFE L+LEVCDETD
Sbjct: 61   QKGTLISCVKTPETAGTAKCD-----DGNPQGLLQKDTLPSATFPNGFEALILEVCDETD 115

Query: 496  VAELKLKIGDFEMNLKRNIGATSTSIPVISSSEPTAVPSKXXXXXXXXXXXXXXXXXXXX 675
            VAELKLK+GDFEM+L+RN+G T+  +PVI+   PTA P+                     
Sbjct: 116  VAELKLKVGDFEMHLRRNVGVTNPPMPVIA---PTAPPTVSAKPPVESAPAAPPSLPPKP 172

Query: 676  XFKYVSP------EKSSKLASLEASGSNGYVLVSSPTVGSIRTGRTVKGKKQPPVCKVGD 837
              + +SP      EK SKL +LEASG+N YVLVSSPTVGS RTGRT+KGK+QPPVCK GD
Sbjct: 173  SQEKISPFTKSLLEKPSKLRALEASGANAYVLVSSPTVGSFRTGRTLKGKRQPPVCKEGD 232

Query: 838  VIKEGQIIGYLDQFGTELPVKSDVAGEVLKLLFSDGEAIGYGDPLLAVLPSFHGIK 1005
            VIKEGQ+IGYLDQFG+ELPVKSD AGEVLK++F+DGEA+GYGDPL+AVLPSFHGI+
Sbjct: 233  VIKEGQVIGYLDQFGSELPVKSDTAGEVLKVIFNDGEAVGYGDPLVAVLPSFHGIE 288


>gb|ACU19863.1| unknown [Glycine max]
          Length = 291

 Score =  273 bits (697), Expect = 8e-71
 Identities = 156/293 (53%), Positives = 189/293 (64%), Gaps = 11/293 (3%)
 Frame = +1

Query: 160  MDSVPLLRSFHCSLGTVTHVQAMLEKPGLIPMCNATSN-KSPLA------GRLSFSPVTR 318
            M+S   +RSFH  +GT++HV+A LEK  ++P+ NA  N KS L       G+   +  T+
Sbjct: 1    MESSAAIRSFHYPIGTMSHVRASLEKQAVVPIHNAGWNSKSRLFIQHLAYGQKHINSHTK 60

Query: 319  -KGTLLPCFKXXXXXXXXXXXXXXXLDSNSNGPVAKKSVNGAIFPKGFEELVLEVCDETD 495
             K TL+ C K                D+   G + KK +  A FP GFE LVLEVCDET+
Sbjct: 61   GKNTLISCGKTAEAINASKSDASS--DNTPQGSLEKKPLQTATFPNGFEALVLEVCDETE 118

Query: 496  VAELKLKIGDFEMNLKRNIGATSTSIPVISSSEPTAVPSKXXXXXXXXXXXXXXXXXXXX 675
            +AELK+K+GDFEM++KRNIGAT   +  IS + P  +PSK                    
Sbjct: 119  IAELKVKVGDFEMHIKRNIGATKVPLSNISPTTPPPIPSKPMDESAPGSLPPSPPKSSPE 178

Query: 676  X---FKYVSPEKSSKLASLEASGSNGYVLVSSPTVGSIRTGRTVKGKKQPPVCKVGDVIK 846
                F  VS EKS +LA+LEASG+N YVLVSSPTVG  R GRTVKGKKQPP+CK GDVIK
Sbjct: 179  KNNPFANVSKEKSPRLAALEASGTNTYVLVSSPTVGLFRRGRTVKGKKQPPICKEGDVIK 238

Query: 847  EGQIIGYLDQFGTELPVKSDVAGEVLKLLFSDGEAIGYGDPLLAVLPSFHGIK 1005
            EGQ+IGYLDQFGT LP+KSDVAGEVLKLL  DGE +GYGDPL+AVL SFH IK
Sbjct: 239  EGQVIGYLDQFGTGLPIKSDVAGEVLKLLVEDGEPVGYGDPLIAVLSSFHDIK 291


>ref|NP_001241051.1| uncharacterized protein LOC100792471 [Glycine max]
            gi|255637418|gb|ACU19037.1| unknown [Glycine max]
          Length = 291

 Score =  270 bits (690), Expect = 5e-70
 Identities = 152/293 (51%), Positives = 187/293 (63%), Gaps = 11/293 (3%)
 Frame = +1

Query: 160  MDSVPLLRSFHCSLGTVTHVQAMLEKPGLIPMCNA--TSNKSPLAGRLSF------SPVT 315
            M+S P +RSFH  +GT++HV+A LEK  ++P+ NA   S +      L++      S + 
Sbjct: 1    MESSPAIRSFHYPMGTMSHVRACLEKQAVLPIHNARWNSKRRLFIQHLAYGQKHINSHMK 60

Query: 316  RKGTLLPCFKXXXXXXXXXXXXXXXLDSNSNGPVAKKSVNGAIFPKGFEELVLEVCDETD 495
             K TL+   K                D+   G + KK +  A FP GFE LVLEVCDET+
Sbjct: 61   GKSTLVSSAKTAEAINTSNSDASS--DNTPQGSLEKKPLQTATFPNGFEALVLEVCDETE 118

Query: 496  VAELKLKIGDFEMNLKRNIGATSTSIPVISSSEPTAVPSKXXXXXXXXXXXXXXXXXXXX 675
            +AELK+K+GDFEM++KRNIGAT   +  IS + P  +PSK                    
Sbjct: 119  IAELKVKVGDFEMHIKRNIGATKVPLSNISPTTPPPIPSKPMDESAPNSLPPSPPKSSPE 178

Query: 676  X---FKYVSPEKSSKLASLEASGSNGYVLVSSPTVGSIRTGRTVKGKKQPPVCKVGDVIK 846
                F  VS EKS KLA+LEASG+N YVLV+SPTVG  R GRTVKGKKQPP+CK GDVIK
Sbjct: 179  KNNPFANVSKEKSPKLAALEASGTNTYVLVTSPTVGLFRRGRTVKGKKQPPICKEGDVIK 238

Query: 847  EGQIIGYLDQFGTELPVKSDVAGEVLKLLFSDGEAIGYGDPLLAVLPSFHGIK 1005
            EGQ+IGYLDQFGT LP++SDVAGEVLKLL  DGE +GYGD L+AVLPSFH IK
Sbjct: 239  EGQVIGYLDQFGTGLPIRSDVAGEVLKLLVEDGEPVGYGDRLIAVLPSFHDIK 291


>gb|AFK42767.1| unknown [Lotus japonicus]
          Length = 288

 Score =  256 bits (655), Expect = 6e-66
 Identities = 151/293 (51%), Positives = 178/293 (60%), Gaps = 11/293 (3%)
 Frame = +1

Query: 160  MDSVPLLRSFHCSLGTVTHVQAMLEKPGLIPMCNATSNKSP------LAGRLSFSPVTRK 321
            M+S   +RSFHC   TV HV++  EK  ++P  NA  N         LA          K
Sbjct: 1    MESSAAIRSFHC---TVPHVRSSFEKVAVVPCHNARWNSKSGLFIQRLANDRMLINSQAK 57

Query: 322  G--TLLPCFKXXXXXXXXXXXXXXXLDSNSNGPVAKKSVNGAIFPKGFEELVLEVCDETD 495
            G  TL+ C K               LDS S   V KK++  A FP G E LVLEVCDET+
Sbjct: 58   GRKTLVSCAKAVEAINTAKSDAS--LDSTSQDSVEKKALQSATFPNGLEALVLEVCDETE 115

Query: 496  VAELKLKIGDFEMNLKRNIGATSTSIPVISSSEPTAVPSKXXXXXXXXXXXXXXXXXXXX 675
            +AELK+K+G+FEM+LKRNIGAT   +  IS + P  +PSK                    
Sbjct: 116  IAELKVKVGEFEMHLKRNIGATKAPLSNISPTTPPPIPSKPMDESAPSTPQSLPPKSSPE 175

Query: 676  X---FKYVSPEKSSKLASLEASGSNGYVLVSSPTVGSIRTGRTVKGKKQPPVCKVGDVIK 846
                F   S +KSSKLA LEASG+N YV++SSPTVG  R GRTVKGK+QPP  K GD+IK
Sbjct: 176  KTNPFVNASVQKSSKLAQLEASGTNNYVIISSPTVGLFRRGRTVKGKRQPPTYKEGDLIK 235

Query: 847  EGQIIGYLDQFGTELPVKSDVAGEVLKLLFSDGEAIGYGDPLLAVLPSFHGIK 1005
            EGQ+IGYLDQFGT LPVKSDVAGEVLKLL  DGE +GYGD L+AVLPSFH IK
Sbjct: 236  EGQVIGYLDQFGTGLPVKSDVAGEVLKLLVEDGEPVGYGDNLIAVLPSFHDIK 288


>gb|AET79248.1| hypothetical protein [Glycine max]
          Length = 278

 Score =  256 bits (653), Expect = 1e-65
 Identities = 145/280 (51%), Positives = 178/280 (63%), Gaps = 11/280 (3%)
 Frame = +1

Query: 199  LGTVTHVQAMLEKPGLIPMCNA--TSNKSPLAGRLSF------SPVTRKGTLLPCFKXXX 354
            +GT++HV+A LEK  ++P+ NA   S +      L++      S +  K TL+   K   
Sbjct: 1    MGTMSHVRACLEKQAVLPIHNARWNSKRRLFIQHLAYGQKHINSHMKGKSTLVSSAKTAE 60

Query: 355  XXXXXXXXXXXXLDSNSNGPVAKKSVNGAIFPKGFEELVLEVCDETDVAELKLKIGDFEM 534
                         D+   G + KK +  A FP GFE LVLEVCDET++AELK+K+GDFEM
Sbjct: 61   AINTSNSDASS--DNTPQGSLEKKPLQTATFPNGFEALVLEVCDETEIAELKVKVGDFEM 118

Query: 535  NLKRNIGATSTSIPVISSSEPTAVPSKXXXXXXXXXXXXXXXXXXXXX---FKYVSPEKS 705
            ++KRNIGAT   +  IS + P  +PSK                        F  VS EKS
Sbjct: 119  HIKRNIGATKVPLSNISPTTPPPIPSKPMDESAPNSLPPSPPKSSPEKNNPFANVSKEKS 178

Query: 706  SKLASLEASGSNGYVLVSSPTVGSIRTGRTVKGKKQPPVCKVGDVIKEGQIIGYLDQFGT 885
             KLA+LEASG+N YVLV+SPTVG  R GRTVKGKKQPP+CK GDVIKEGQ+IGYLDQFGT
Sbjct: 179  PKLAALEASGTNTYVLVTSPTVGLFRRGRTVKGKKQPPICKEGDVIKEGQVIGYLDQFGT 238

Query: 886  ELPVKSDVAGEVLKLLFSDGEAIGYGDPLLAVLPSFHGIK 1005
             LP++SDVAGEVLKLL  DGE +GYGD L+AVLPSFH IK
Sbjct: 239  GLPIRSDVAGEVLKLLVEDGEPVGYGDRLIAVLPSFHDIK 278


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