BLASTX nr result

ID: Coptis25_contig00002546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002546
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536553.1| PREDICTED: uncharacterized protein LOC100790...   165   4e-39
ref|XP_004134107.1| PREDICTED: uncharacterized protein LOC101219...   164   9e-39
ref|XP_003519040.1| PREDICTED: uncharacterized protein LOC100814...   162   2e-38
ref|XP_002283908.1| PREDICTED: AT-rich interactive domain-contai...   162   2e-38
ref|XP_002517038.1| conserved hypothetical protein [Ricinus comm...   153   1e-35

>ref|XP_003536553.1| PREDICTED: uncharacterized protein LOC100790539 [Glycine max]
          Length = 460

 Score =  165 bits (417), Expect = 4e-39
 Identities = 90/150 (60%), Positives = 102/150 (68%)
 Frame = +1

Query: 22  MQKREQSKVXXXXXXXXXXXXXKRGRPIXXXXXXXXXXXXXXXXXXXXXXXLLLGPSLQI 201
           MQKREQ K              KRGRP                         LLGPSL +
Sbjct: 1   MQKREQGK-SGGSAGGGATPPAKRGRPFGSGNNSSSAAASAADSAAPST---LLGPSLHV 56

Query: 202 HNSLSDQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKEEVRRDAIPLAKIPGLLDAVL 381
           HNS +DQNNKRIVLALQSGLK+ELTWALNTLTLLSFKEK+++R+DA PLAKIPGLLDA+L
Sbjct: 57  HNSFADQNNKRIVLALQSGLKNELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALL 116

Query: 382 QIVDDWRDIALPNELKRTPRVRLLGANSVV 471
           Q++DDWRDIALP E  +T R+R LGANSVV
Sbjct: 117 QVIDDWRDIALPKEFAKTTRIRTLGANSVV 146


>ref|XP_004134107.1| PREDICTED: uncharacterized protein LOC101219772 [Cucumis sativus]
           gi|449516049|ref|XP_004165060.1| PREDICTED:
           uncharacterized LOC101219772 [Cucumis sativus]
          Length = 460

 Score =  164 bits (414), Expect = 9e-39
 Identities = 89/151 (58%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
 Frame = +1

Query: 22  MQKREQSKVXXXXXXXXXXXXXKRGRPIXXXXXXXXXXXXXXXXXXXXXXX-LLLGPSLQ 198
           MQKR+Q+K+             KRGRP                          LLGPSL 
Sbjct: 1   MQKRDQNKLGGNVSGGASAPPAKRGRPFGSVNSNAAAVAAAVAAGTETLAPSTLLGPSLH 60

Query: 199 IHNSLSDQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKEEVRRDAIPLAKIPGLLDAV 378
           IH S +DQNNKRIVLALQSGLKSELTWALNTLTLLSFKEK+++RRD+ PLAKIPGLLDA+
Sbjct: 61  IHTSFADQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRRDSTPLAKIPGLLDAL 120

Query: 379 LQIVDDWRDIALPNELKRTPRVRLLGANSVV 471
           LQ++DDWRDIALP +L +  RVR LGANS V
Sbjct: 121 LQVIDDWRDIALPRDLVKKQRVRTLGANSSV 151


>ref|XP_003519040.1| PREDICTED: uncharacterized protein LOC100814807 [Glycine max]
          Length = 460

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/98 (80%), Positives = 90/98 (91%)
 Frame = +1

Query: 178 LLGPSLQIHNSLSDQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKEEVRRDAIPLAKI 357
           LLGPSL +HNS +DQNNKRIVLALQSGLKSELTWALN LTLLSFKEK+++R+DA PLAKI
Sbjct: 49  LLGPSLHVHNSFADQNNKRIVLALQSGLKSELTWALNILTLLSFKEKDDMRKDATPLAKI 108

Query: 358 PGLLDAVLQIVDDWRDIALPNELKRTPRVRLLGANSVV 471
           PGLLDA+LQ++DDWRDIALP EL +T RVR LGA+SVV
Sbjct: 109 PGLLDALLQVIDDWRDIALPKELAKTTRVRTLGASSVV 146


>ref|XP_002283908.1| PREDICTED: AT-rich interactive domain-containing protein 2 [Vitis
           vinifera] gi|147794687|emb|CAN69148.1| hypothetical
           protein VITISV_003946 [Vitis vinifera]
           gi|297737139|emb|CBI26340.3| unnamed protein product
           [Vitis vinifera]
          Length = 457

 Score =  162 bits (411), Expect = 2e-38
 Identities = 89/150 (59%), Positives = 102/150 (68%)
 Frame = +1

Query: 22  MQKREQSKVXXXXXXXXXXXXXKRGRPIXXXXXXXXXXXXXXXXXXXXXXXLLLGPSLQI 201
           MQKR+QSK+             KRGRP                         LLGPSL +
Sbjct: 1   MQKRDQSKLGGTAGGATTPAA-KRGRPFGSGGSNSAAAAAADAAAPST----LLGPSLHV 55

Query: 202 HNSLSDQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKEEVRRDAIPLAKIPGLLDAVL 381
           H+S +DQNNKRIVLALQSGLKSEL WA+N LTLLSFKEK++VR+DA PLAKIPGLLDA+L
Sbjct: 56  HSSFADQNNKRIVLALQSGLKSELGWAINALTLLSFKEKDDVRKDATPLAKIPGLLDALL 115

Query: 382 QIVDDWRDIALPNELKRTPRVRLLGANSVV 471
           Q++DDWRDIALP EL + PR RLLGANS V
Sbjct: 116 QVIDDWRDIALPKELAKAPRARLLGANSFV 145


>ref|XP_002517038.1| conserved hypothetical protein [Ricinus communis]
           gi|223543673|gb|EEF45201.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score =  153 bits (387), Expect = 1e-35
 Identities = 88/150 (58%), Positives = 100/150 (66%)
 Frame = +1

Query: 22  MQKREQSKVXXXXXXXXXXXXXKRGRPIXXXXXXXXXXXXXXXXXXXXXXXLLLGPSLQI 201
           MQKREQ+K              KRGRP                         LLGPSLQ+
Sbjct: 1   MQKREQNK-SGGSAGGATAPSAKRGRPFGSTSSNITSSGSGGDTVAPLN---LLGPSLQV 56

Query: 202 HNSLSDQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKEEVRRDAIPLAKIPGLLDAVL 381
           H S  DQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKE++R+D+  L KI GLLDA+L
Sbjct: 57  HTSFVDQNNKRIVLALQSGLKSELTWALNTLTLLSFKEKEDMRKDS--LCKISGLLDALL 114

Query: 382 QIVDDWRDIALPNELKRTPRVRLLGANSVV 471
           Q++DDWRDIA P +L +TPRVR LGANS+V
Sbjct: 115 QVIDDWRDIAPPKDLSKTPRVRTLGANSLV 144


Top