BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002543
         (3652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531375.1| RNA and export factor binding protein, putat...   167   1e-38
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   163   3e-37
ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   159   5e-36
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...   157   2e-35
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo...   155   8e-35

>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
            gi|223529035|gb|EEF31023.1| RNA and export factor binding
            protein, putative [Ricinus communis]
          Length = 247

 Score =  167 bits (424), Expect = 1e-38
 Identities = 94/145 (64%), Positives = 101/145 (69%)
 Frame = -1

Query: 1051 QELFSEVGDLKRYSVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIEIVG 872
            +ELFSEVGDLKRYS+HYDRSGRSKGTAEVVFSRR+DA AAVKRYNNVQLDGKPMKIEIVG
Sbjct: 108  KELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVG 167

Query: 871  TNIVTPGALPIAPNGVFGNPNFAPRGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 692
            TNI TP A P A NG FGN N APRGGQ                                
Sbjct: 168  TNIATPAATP-AANGNFGNSNGAPRGGQ----GRGGTMRRPRGASSDGRGFGRGRGRGRG 222

Query: 691  RSDPVSAKDLDAELDKYHSEAMQIN 617
            R + VSA+DLDA+L+KYHSEAMQ N
Sbjct: 223  RGEKVSAEDLDADLEKYHSEAMQTN 247


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
            gi|297746115|emb|CBI16171.3| unnamed protein product
            [Vitis vinifera]
          Length = 243

 Score =  163 bits (413), Expect = 3e-37
 Identities = 90/145 (62%), Positives = 97/145 (66%)
 Frame = -1

Query: 1051 QELFSEVGDLKRYSVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIEIVG 872
            +ELFSEVGDLKRYS+HYDRSGRSKGTAEVVFSRR DA AAVKRYNNVQLDGKPMKIEIVG
Sbjct: 104  KELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVG 163

Query: 871  TNIVTPGALPIAPNGVFGNPNFAPRGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 692
            TNI TP A+P   NG FGN N   R  Q                                
Sbjct: 164  TNIATPAAVPPVTNGTFGNSNGGLRSAQ-----GRVGSQGRPRGGSGGRGFGRGRGRGRG 218

Query: 691  RSDPVSAKDLDAELDKYHSEAMQIN 617
            R + VSA+DLDA+L+KYHSEAMQIN
Sbjct: 219  RGEKVSAEDLDADLEKYHSEAMQIN 243


>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine max]
          Length = 247

 Score =  159 bits (402), Expect = 5e-36
 Identities = 88/145 (60%), Positives = 99/145 (68%)
 Frame = -1

Query: 1051 QELFSEVGDLKRYSVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIEIVG 872
            +ELF+EVGDLKR++VHYDRSGRSKGTAEVVFSRR+DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 106  KELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVG 165

Query: 871  TNIVTPGALPIAPNGVFGNPNFAPRGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 692
            TNI TPG  P APNG  GN N  PR GQ                                
Sbjct: 166  TNISTPGVAP-APNGAIGNFNGVPRSGQ--GRGGALRRPGGRGQGIRRDRGRGRGRGGGG 222

Query: 691  RSDPVSAKDLDAELDKYHSEAMQIN 617
            R + VSA DLDA+L+KYH+EAMQ+N
Sbjct: 223  RGEKVSADDLDADLEKYHAEAMQLN 247


>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
            sativus]
          Length = 237

 Score =  157 bits (398), Expect = 2e-35
 Identities = 84/145 (57%), Positives = 100/145 (68%)
 Frame = -1

Query: 1051 QELFSEVGDLKRYSVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIEIVG 872
            +ELFSEVGD+KRYS++YD+SGRSKGTAE+VFSR++DA AA+KRYNNVQLDGKPMK+EIVG
Sbjct: 104  KELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG 163

Query: 871  TNIVTPGALPIAPNGVFGNPNFAPRGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 692
            TNIVTP A+P   N  FGNPN  PRGG+                                
Sbjct: 164  TNIVTP-AVPAPSNASFGNPNGFPRGGR----------AMGRNRGGGRGRSGSGSGSGRG 212

Query: 691  RSDPVSAKDLDAELDKYHSEAMQIN 617
              + +SA+DLDA+LDKYH EAMQIN
Sbjct: 213  HGEKLSAEDLDADLDKYHEEAMQIN 237


>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding protein
            2-like [Cucumis sativus]
          Length = 248

 Score =  155 bits (392), Expect = 8e-35
 Identities = 83/146 (56%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
 Frame = -1

Query: 1051 QELFSEVGDLKRYSVHYDRSGRSKGTAEVVFSRRSDAAAAVKRYNNVQLDGKPMKIEIVG 872
            +ELFSEVGD+KRYS++YD+SGRSKGTAE+ FSR++DA AA+KRYNNVQLDGKPMK+EIVG
Sbjct: 104  KELFSEVGDVKRYSINYDKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKLEIVG 163

Query: 871  TNIVTPGALPIAPNGVFGNPNFAPRGGQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 695
            TNIVTP A+P   N  FGNPN  PRGG+                                
Sbjct: 164  TNIVTP-AVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGR 222

Query: 694  XRSDPVSAKDLDAELDKYHSEAMQIN 617
               + +SA+DLDA+LDKYH EAMQIN
Sbjct: 223  GHGEKLSAEDLDADLDKYHEEAMQIN 248