BLASTX nr result
ID: Coptis25_contig00002540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002540
(1750 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25128.3| unnamed protein product [Vitis vinifera] 259 2e-66
ref|XP_002522106.1| conserved hypothetical protein [Ricinus comm... 251 6e-64
ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinif... 234 5e-59
gb|AFK46566.1| unknown [Medicago truncatula] 231 5e-58
gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo] 225 3e-56
>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
Length = 508
Score = 259 bits (661), Expect = 2e-66
Identities = 188/490 (38%), Positives = 246/490 (50%), Gaps = 36/490 (7%)
Frame = +3
Query: 3 KLRIRCLETRQTLKISIQTNPSLENLKETIAEKIXXXXXXXXXXXX---NRQEEI-IASP 170
KLR+R LE+++TLKI + SL++ ++ I NR++E+ ++S
Sbjct: 2 KLRVRSLESKETLKIQVPDPCSLQHFIHLLSLAISSSSSSSSSIIYLSLNRKDELQVSSS 61
Query: 171 NDSLTSLGIASGDLIYYTLNTNGFSLQS-------SNQVSTQTLMDIDTVC--------- 302
D+L SLG+ SGDLI+Y+ N FS SN +TL++ T+
Sbjct: 62 LDTLQSLGVTSGDLIFYSFNPTAFSQTPIPSETLVSNSERKETLLESQTLAPLAQANPHE 121
Query: 303 -------TNSDKKNESFDDLKHTQXXXXXXXXXXXXXXXXXX-KKFSSVPCFLQKVXXXX 458
+ KKNE+ + T KK S PCFL+KV
Sbjct: 122 PKEYGSLVSDSKKNETQEFSGATSMDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVLREE 181
Query: 459 XXXXXXXXXXXXXXXXLLMIAVHAVFLESGFVCFDSLTGKKMEGFRFPEDWKFR-----L 623
LL+IAVHAV LESGFV FDS++G +++ F E++ F L
Sbjct: 182 VGDDGNEHK-------LLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEEYPFAAISMSL 234
Query: 624 RYTVPDLLDGGGHEK--FEIVDLKFSTLGKFVNVHGFLSRNSLDMFRACLDKSRFAPSVE 797
YT+P+LLD G + + V LKF LG+F+N++G LS N + LD+ RFAP+++
Sbjct: 235 WYTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRSTVHWVSLDEYRFAPTLD 294
Query: 798 FVCLNCGLAGEEKETDESLKSFHEKKVFELWKIVKDELALPLLINLCEKNGLGSPPCFSV 977
+ + A EEK+ S S+ E +VFE WKIVKD LALPLL +LCEK GL PPC
Sbjct: 295 LMWTHSDSA-EEKDRGSS-NSYPENEVFEFWKIVKDGLALPLLTDLCEKGGLLPPPCLMR 352
Query: 978 LPTDLKLKILEFVSGTDLAKVGCASSELRYLSSNNDLWKQKYVEEFSLVDSGDTTNNNWK 1157
LPT+LKLKILE + G DL KVGC SEL YLSSNNDLWKQK+ EEF V G + WK
Sbjct: 353 LPTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNVRVGQGF-SLWK 411
Query: 1158 EKFVVCRERNKKRK-VRSYFLPFTQPRLPYXXXXXXXXXXXXXXXXXXXDYDLFPAPFGS 1334
+KF E KKRK V F P DYD FPA G
Sbjct: 412 DKFATWWENRKKRKRVSGMCTWFPSLEAPSYFPIRRDPNPFAIPPTIGGDYDHFPA-LGI 470
Query: 1335 NSGLRLPARR 1364
S P RR
Sbjct: 471 PSPFGQPGRR 480
>ref|XP_002522106.1| conserved hypothetical protein [Ricinus communis]
gi|223538705|gb|EEF40306.1| conserved hypothetical
protein [Ricinus communis]
Length = 523
Score = 251 bits (640), Expect = 6e-64
Identities = 180/533 (33%), Positives = 256/533 (48%), Gaps = 66/533 (12%)
Frame = +3
Query: 3 KLRIRCLETRQTLKISIQTNPSLENLKETI--AEKIXXXXXXXXXXXXNRQEEIIASP-N 173
KLR+R +E+++T+K+ + + +L+ LKET+ A NR++E+++S
Sbjct: 2 KLRLRSVESKETVKLEVPNDCNLQQLKETLILALSSSSSSSSSLHFSLNRKDELLSSSLQ 61
Query: 174 DSLTSLGIASGDLIYYTLNTNGFSLQSSNQVSTQTLMD---------------------- 287
DSL SLGI SGDLIY+T +G S Q +T +
Sbjct: 62 DSLQSLGITSGDLIYFTQKPDGL-FSPSQQTQQRTFQESESFAQENAAQLNIKEPSSKEI 120
Query: 288 -----IDTVCTNSDKKNESFDD--LKHTQXXXXXXXXXXXXXXXXXXKKFS--------- 419
++ + N + SF D +K T+ + ++
Sbjct: 121 EISEELEVIGLNCSNQETSFQDSSIKETRQGLPAVSNTQFGETLENDQGYARGDDMDVGT 180
Query: 420 ------------SVPCFLQKVXXXXXXXXXXXXXXXXXXXXLLMIAVHAVFLESGFVCFD 563
S PCFL++V LL IA+HAVFLESGFV FD
Sbjct: 181 ESADVDVKSKRISEPCFLKRVLGEEDFAVDFSDNK------LLFIAIHAVFLESGFVGFD 234
Query: 564 SLTGKKMEGFRFPED-----WKFRLRYTVPDLLDGGGHEKFEIVDLKFSTLGKFVNVHGF 728
S++G +++ F ++ + + YT+P+LLD + V LKF TLG+FVNV+G
Sbjct: 235 SVSGLRVDLFHLLQEQPLMNFTTSVSYTLPELLDNDN--VIDSVVLKFQTLGQFVNVYGS 292
Query: 729 LSRNSLDMFRACLDKSRFAPSVEFVCLNCGLAGEEKETDESLKSFHEKKVFELWKIVKDE 908
++++ ++R+CLDK R+ P++ + + ++ +T S+ E VFELWKIVKD
Sbjct: 293 VAKSRSLVYRSCLDKCRYVPAIGSIWITW----DKSDTAYENNSYTENVVFELWKIVKDH 348
Query: 909 LALPLLINLCEKNGLGSPPCFSVLPTDLKLKILEFVSGTDLAKVGCASSELRYLSSNNDL 1088
LALPLLI+LCEK GL PPC LP D+K KILE + G +A++ C E++YLSS+NDL
Sbjct: 349 LALPLLIDLCEKTGLVLPPCLMRLPADIKHKILESLPGIAIARMACVCKEMQYLSSSNDL 408
Query: 1089 WKQKYVEEFSLVDSGDTTNN--NWKEKFVVCRERNKKRKVRSYFLPFTQPRLPYXXXXXX 1262
WKQKY EEF SG NWK KF E KKR+ RS+ P +
Sbjct: 409 WKQKYGEEFG---SGTLQQEMVNWKVKFASSWENRKKRRKRSFVRPTPVNFIRSEPYRFM 465
Query: 1263 XXXXXXXXXXXXXDYDLFPA-----PFGS-NSGLRLPARRNFVRHCNLDGFNA 1403
DYD P PFG LR RRN +CNL GFNA
Sbjct: 466 VPPQIGSRIIIGGDYDRLPGLGVPPPFGQPGRNLRNIVRRNISPNCNLGGFNA 518
>ref|XP_002276156.1| PREDICTED: F-box protein SKIP22 [Vitis vinifera]
gi|147804806|emb|CAN73524.1| hypothetical protein
VITISV_010705 [Vitis vinifera]
Length = 563
Score = 234 bits (597), Expect = 5e-59
Identities = 154/345 (44%), Positives = 188/345 (54%), Gaps = 15/345 (4%)
Frame = +3
Query: 408 KKFSSVPCFLQKVXXXXXXXXXXXXXXXXXXXXLLMIAVHAVFLESGFVCFDSLTGKKME 587
KK S PCFL+KV LL+IAVHAV LESGFV FDS++G +++
Sbjct: 227 KKSFSEPCFLRKVLREEVGDDGNEHK-------LLVIAVHAVMLESGFVGFDSVSGMRVD 279
Query: 588 GFRFPEDWKFR-----LRYTVPDLLDGGGHEK--FEIVDLKFSTLGKFVNVHGFLSRNSL 746
F E++ F L YT+P+LLD G + + V LKF LG+F+N++G LS N
Sbjct: 280 RFHLSEEYPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRS 339
Query: 747 DMFRACLDKSRFAPSVEFVCLNCGLAGEEKETDESLKSFHEKKVFELWKIVKDELALPLL 926
+ LD+ RFAP+++ + + A EEK+ S S+ E +VFE WKIVKD LALPLL
Sbjct: 340 TVHWVSLDEYRFAPTLDLMWTHSDSA-EEKDRGSS-NSYPENEVFEFWKIVKDGLALPLL 397
Query: 927 INLCEKNGLGSPPCFSVLPTDLKLKILEFVSGTDLAKVGCASSELRYLSSNNDLWKQKYV 1106
+LCEK GL PPC LPT+LKLKILE + G DL KVGC SEL YLSSNNDLWKQK+
Sbjct: 398 TDLCEKGGLLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFT 457
Query: 1107 EEFSLVDSGDTTNNNWKEKFVVCRERNKKRK-VRSYFLPFTQPRLPYXXXXXXXXXXXXX 1283
EEF V G + WK+KF E KKRK V F P
Sbjct: 458 EEFGNVRVGQGF-SLWKDKFATWWENRKKRKRVSGMCTWFPSLEAPSYFPIRRDPNPFAI 516
Query: 1284 XXXXXXDYDLFPA-----PFGSNSGL--RLPARRNFVRHCNLDGF 1397
DYD FPA PFG R A RN + CNL GF
Sbjct: 517 PPTIGGDYDHFPALGIPSPFGQPGRRYHRFLAPRNTIPRCNLGGF 561
>gb|AFK46566.1| unknown [Medicago truncatula]
Length = 462
Score = 231 bits (589), Expect = 5e-58
Identities = 176/490 (35%), Positives = 241/490 (49%), Gaps = 25/490 (5%)
Frame = +3
Query: 3 KLRIRCLETRQTLKISIQTNPSLENLKETIAEKIXXXXXXXXXXXXNRQEEI-IASPNDS 179
KLR+R LE+++TLKI + + S + LK TI++ I NR++EI +ASP+DS
Sbjct: 2 KLRLRSLESKETLKIEVPDSCSSQQLKFTISQTIPSSSSSSIHLSLNRKDEINVASPSDS 61
Query: 180 LTSLGIASGDLIYYTLNTNGFSLQSS--NQVSTQTLMDIDTVCTNSDKKNESFDDLKHTQ 353
L S+GIASGDLI+YT N N FS + ++ + Q ++ T D+K+ + + +
Sbjct: 62 LHSIGIASGDLIFYTFNPNAFSHNETLPHKPNNQPIIQNSPEITPIDEKSPTLNTPEVND 121
Query: 354 XXXXXXXXXXXXXXXXXXKKFSSVPCFLQKVXXXXXXXXXXXXXXXXXXXXLLMIAVHAV 533
K + P F+++V LL+ AVHAV
Sbjct: 122 TEMVDGSDEAATAMTMAVKN-NPEPDFVKRVIKEALGDDVSDLK-------LLVFAVHAV 173
Query: 534 FLESGFVCFDSLTGKKMEGFRFPEDWK---------------FRLRYTVPDLLDGGGHEK 668
LESGFV D ++G + +D LRYT+P++L G
Sbjct: 174 ILESGFVRVDEVSGMAISCSNLVDDMSSSSSSSSSSSSSSSMISLRYTLPEILTNGSSHA 233
Query: 669 FEIVDLKFSTLGKFVNVHGFLSRNSLD-MFRACLDKSRFAPSVEFVCLNCGLAGEEKETD 845
V LK TLG FVNV+G L ++ + R LDKSRFA +E + N G +
Sbjct: 234 ---VILKIQTLGNFVNVYGSLCDDAGSRVHRVYLDKSRFAKPLELMLENSEFNGNFNDVG 290
Query: 846 ESLKSFHEKKVFELWKIVKDELALPLLINLCEKNGLGSPPCFSVLPTDLKLKILEFVSGT 1025
+ KVFELWKIVKD LALPLLI+LC+K GL PPCF LP +LKL I E++ G
Sbjct: 291 D--------KVFELWKIVKDGLALPLLIDLCDKAGLELPPCFMRLPMELKLLIFEYLPGD 342
Query: 1026 DLAKVGCASSELRYLSSNNDLWKQKYVEEFSLVDSGDTTNNNWKEKFVVCRERNKKRKVR 1205
DLAKV C SEL+YL+SN+DLWK+K+ EEF G N K + + R K+K+
Sbjct: 343 DLAKVCCTCSELQYLASNDDLWKKKFEEEF-----GQRVNGMKFFKNLFAQYRATKKKLE 397
Query: 1206 SYFLPFTQPR---LPYXXXXXXXXXXXXXXXXXXXDYDLFPAPFGSNSGLRLPA---RRN 1367
L F PR + +YDL P N G+ LPA RR
Sbjct: 398 QPIL-FQNPRRSGIMRFFQRRRFPNRFGMPPIWGGEYDLQP-----NFGVNLPAYARRRT 451
Query: 1368 FVRHCNLDGF 1397
F+ C+L F
Sbjct: 452 FIPPCHLGEF 461
>gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]
Length = 502
Score = 225 bits (574), Expect = 3e-56
Identities = 167/451 (37%), Positives = 231/451 (51%), Gaps = 49/451 (10%)
Frame = +3
Query: 3 KLRIRCLETRQTLKISIQTNPSLENLKETIAEKIXXXXXXXXXXXX-NRQEEIIAS-PND 176
KLR+R LE++QTL+I + +L +LK+T+ + + NR++E+ AS P D
Sbjct: 2 KLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPED 61
Query: 177 SLTSLGIASGDLIYYTLNTNGF----------------------SLQSSN---QVSTQTL 281
SL SLGI SGDL+++T + F SL SS+ QV + L
Sbjct: 62 SLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQL 121
Query: 282 MDIDTVCTNSDKKNESFDDLKHTQXXXXXXXXXXXXXXXXXX-----------KKFSSVP 428
+ ID +N + + +K S P
Sbjct: 122 LGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIEESDCEEMEVEEEPTVVVEKKCSRP 181
Query: 429 CFLQKVXXXXXXXXXXXXXXXXXXXXLLMIAVHAVFLESGFVCFDSLTGKKMEGFRFPED 608
FL++V LL+ AVHAV LESGFV + G + FR PED
Sbjct: 182 IFLRRVLKEELGYDRNAHK-------LLVTAVHAVLLESGFVLINPNLGFEDSPFRMPED 234
Query: 609 WK-----FRLRYTVPDLLDGGGHEKF--EIVDLKFSTLGKFVNVHGFL--SRNSLDMFRA 761
W L YT+P+LL G E+V LKF +LG FVNV+G L SR S ++R
Sbjct: 235 WPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGS-SVYRV 293
Query: 762 CLDKSRFAPSVEFVCLNC--GLAGEEKETDESLKSFHEKKVFELWKIVKDELALPLLINL 935
LD+ +FAP+++ + ++ +EKE + EK+VFE WKIVKD LALPLLI++
Sbjct: 294 SLDERKFAPNLDLIWVDSVSNYIMDEKEGNP------EKQVFEFWKIVKDALALPLLIDI 347
Query: 936 CEKNGLGSPPCFSVLPTDLKLKILEFVSGTDLAKVGCASSELRYLSSNNDLWKQKYVEEF 1115
CEK GL P F +LP D+KLKILE + G D+A+V C +ELRYL+S+N+LWK K+ +EF
Sbjct: 348 CEKTGLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEF 407
Query: 1116 SLVDSGDTTNNNWKEKFVVCRERNKKRKVRS 1208
L D G + N WK KFV ER K+R R+
Sbjct: 408 GLED-GVSGNRVWKTKFVEYYEREKQRNRRT 437