BLASTX nr result

ID: Coptis25_contig00002529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002529
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280151.1| PREDICTED: uncharacterized protein LOC100261...   107   3e-26
ref|XP_002531666.1| conserved hypothetical protein [Ricinus comm...   101   1e-23
ref|XP_003536806.1| PREDICTED: uncharacterized protein LOC100791...   102   4e-20
ref|XP_002302078.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
gb|AFK48115.1| unknown [Medicago truncatula]                          100   2e-19

>ref|XP_002280151.1| PREDICTED: uncharacterized protein LOC100261325 [Vitis vinifera]
           gi|297737157|emb|CBI26358.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  107 bits (268), Expect(2) = 3e-26
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = -1

Query: 426 GPKDLPRIARTAGRLAGRAIGYVQLARGQFENVMQQSQATQVHKELQDTMAQLEAIR 256
           GPKDLP IARTAGRLAGRAIGYVQLARGQFENVMQQSQA QVHKELQDTMAQL+AIR
Sbjct: 21  GPKDLPMIARTAGRLAGRAIGYVQLARGQFENVMQQSQARQVHKELQDTMAQLDAIR 77



 Score = 35.8 bits (81), Expect(2) = 3e-26
 Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = -2

Query: 146 NNVAPKVDEEQIPPQT--IFKENGSIPSNAANLESQATAFARLAEAQALK 3
           +N  P+  EEQ        FK +GSI     NL SQATAFA+LAE+ A K
Sbjct: 108 DNAVPEKQEEQKAKNVDQSFKTSGSI-----NLHSQATAFAKLAESAAQK 152


>ref|XP_002531666.1| conserved hypothetical protein [Ricinus communis]
           gi|223528697|gb|EEF30710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 236

 Score =  101 bits (252), Expect(2) = 1e-23
 Identities = 52/57 (91%), Positives = 53/57 (92%)
 Frame = -1

Query: 426 GPKDLPRIARTAGRLAGRAIGYVQLARGQFENVMQQSQATQVHKELQDTMAQLEAIR 256
           G KDLP I+RTAGRLAGRAIGYVQLARGQ ENVMQQSQA QVHKELQDTMAQLEAIR
Sbjct: 21  GSKDLPIISRTAGRLAGRAIGYVQLARGQLENVMQQSQARQVHKELQDTMAQLEAIR 77



 Score = 32.7 bits (73), Expect(2) = 1e-23
 Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 14/62 (22%)
 Frame = -2

Query: 146 NNVAPKV-DEEQIPPQTIFKE------NGSIP-------SNAANLESQATAFARLAEAQA 9
           +N+ P   D E  P  TI K        GSIP       S+   + SQATA ARLAE+ A
Sbjct: 107 DNIVPNSQDAENKPKATISKHCTEPTNGGSIPTPKNSKTSDLCIMHSQATAHARLAESSA 166

Query: 8   LK 3
           LK
Sbjct: 167 LK 168


>ref|XP_003536806.1| PREDICTED: uncharacterized protein LOC100791066 [Glycine max]
          Length = 224

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/57 (89%), Positives = 53/57 (92%)
 Frame = -1

Query: 426 GPKDLPRIARTAGRLAGRAIGYVQLARGQFENVMQQSQATQVHKELQDTMAQLEAIR 256
           GPKDLP I RTAGRLAGRAIGYVQLARGQF+ VMQQSQA QVHKELQDTMAQL+AIR
Sbjct: 21  GPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQARQVHKELQDTMAQLDAIR 77


>ref|XP_002302078.1| predicted protein [Populus trichocarpa] gi|222843804|gb|EEE81351.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/57 (87%), Positives = 54/57 (94%)
 Frame = -1

Query: 426 GPKDLPRIARTAGRLAGRAIGYVQLARGQFENVMQQSQATQVHKELQDTMAQLEAIR 256
           GPKDLP IARTAGRL GRAIGYVQ+ARGQF++VMQQSQA QVHKELQDTMAQL+AIR
Sbjct: 21  GPKDLPLIARTAGRLTGRAIGYVQMARGQFDSVMQQSQARQVHKELQDTMAQLDAIR 77


>gb|AFK48115.1| unknown [Medicago truncatula]
          Length = 223

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/57 (84%), Positives = 54/57 (94%)
 Frame = -1

Query: 426 GPKDLPRIARTAGRLAGRAIGYVQLARGQFENVMQQSQATQVHKELQDTMAQLEAIR 256
           GPKDLP I+RTAGRLAGRA+GYVQLARGQF++VMQ+SQ  QVHKELQ+TMAQLEAIR
Sbjct: 21  GPKDLPMISRTAGRLAGRAVGYVQLARGQFDSVMQRSQVNQVHKELQETMAQLEAIR 77


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