BLASTX nr result

ID: Coptis25_contig00002527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002527
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276699.1| PREDICTED: uncharacterized protein At4g28440...   194   3e-47
emb|CBI21894.3| unnamed protein product [Vitis vinifera]              192   7e-47
ref|XP_004146043.1| PREDICTED: uncharacterized protein At4g28440...   187   4e-45
ref|XP_003632005.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   182   1e-43
ref|XP_003529346.1| PREDICTED: uncharacterized protein At4g28440...   180   5e-43

>ref|XP_002276699.1| PREDICTED: uncharacterized protein At4g28440-like [Vitis vinifera]
          Length = 166

 Score =  194 bits (492), Expect = 3e-47
 Identities = 101/135 (74%), Positives = 110/135 (81%), Gaps = 5/135 (3%)
 Frame = -2

Query: 840 TETMGGTPSQNTTTSSV-----KRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAA 676
           TET   T +  TT ++      KRK VF KV++LKPGT GH L VKVVSS TVLQKGR+ 
Sbjct: 15  TETAMTTETTETTETAKAAVTEKRKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSV 74

Query: 675 SQHLRHTRIAECLVGDETGTIVFTARNEQVDMMKAGATVNLRNAKIDMFRGSMRLAVDKW 496
           SQHLRHTRIAECLVGDETG I+FTARN+QVDMMKAGATV LRNAKIDMF+GSMRLAVDKW
Sbjct: 75  SQHLRHTRIAECLVGDETGAIIFTARNDQVDMMKAGATVILRNAKIDMFKGSMRLAVDKW 134

Query: 495 GRVEVTEPAKFVAKE 451
           GRVEVTE A FV KE
Sbjct: 135 GRVEVTEDANFVVKE 149


>emb|CBI21894.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score =  192 bits (489), Expect = 7e-47
 Identities = 99/130 (76%), Positives = 107/130 (82%)
 Frame = -2

Query: 840 TETMGGTPSQNTTTSSVKRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAASQHLR 661
           TET   T +     +  KRK VF KV++LKPGT GH L VKVVSS TVLQKGR+ SQHLR
Sbjct: 3   TETTETTETAKAAVTE-KRKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLR 61

Query: 660 HTRIAECLVGDETGTIVFTARNEQVDMMKAGATVNLRNAKIDMFRGSMRLAVDKWGRVEV 481
           HTRIAECLVGDETG I+FTARN+QVDMMKAGATV LRNAKIDMF+GSMRLAVDKWGRVEV
Sbjct: 62  HTRIAECLVGDETGAIIFTARNDQVDMMKAGATVILRNAKIDMFKGSMRLAVDKWGRVEV 121

Query: 480 TEPAKFVAKE 451
           TE A FV KE
Sbjct: 122 TEDANFVVKE 131


>ref|XP_004146043.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
           gi|449520479|ref|XP_004167261.1| PREDICTED:
           uncharacterized protein At4g28440-like [Cucumis sativus]
          Length = 154

 Score =  187 bits (474), Expect = 4e-45
 Identities = 94/138 (68%), Positives = 106/138 (76%)
 Frame = -2

Query: 861 MATVVSKTETMGGTPSQNTTTSSVKRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGR 682
           MAT  S T         N       RK VF+K+E+LKPGTNGH L VKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAPRPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 681 AASQHLRHTRIAECLVGDETGTIVFTARNEQVDMMKAGATVNLRNAKIDMFRGSMRLAVD 502
           + SQHLR TRIAECLVGDETGTI+FTARN+QVD +K G T+ LRNAKIDMF+GSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 501 KWGRVEVTEPAKFVAKED 448
           KWGR+E+ +P  FV KED
Sbjct: 121 KWGRIELADPEDFVVKED 138


>ref|XP_003632005.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At4g28440-like [Vitis vinifera]
          Length = 158

 Score =  182 bits (462), Expect = 1e-43
 Identities = 98/141 (69%), Positives = 110/141 (78%), Gaps = 4/141 (2%)
 Frame = -2

Query: 861 MATVVSKT--ETMGGTPSQNTTTSSV--KRKAVFIKVEELKPGTNGHNLNVKVVSSNTVL 694
           MAT  ++T  E    T +  T  ++V  KRK VF KV++LKPGT GH L VKVVSS TVL
Sbjct: 1   MATTATETGMEMAMTTATTETAKAAVTEKRKPVFTKVDQLKPGTGGHTLTVKVVSSKTVL 60

Query: 693 QKGRAASQHLRHTRIAECLVGDETGTIVFTARNEQVDMMKAGATVNLRNAKIDMFRGSMR 514
           QKGR+ SQHLRHT IAECLV DETG I+FTARN++VDMMK GATV LRNAKIDMF+GSMR
Sbjct: 61  QKGRSVSQHLRHTCIAECLVXDETGAIIFTARNDEVDMMKPGATVILRNAKIDMFKGSMR 120

Query: 513 LAVDKWGRVEVTEPAKFVAKE 451
           LAVDKWG VEVTE A FV KE
Sbjct: 121 LAVDKWGCVEVTEDANFVVKE 141


>ref|XP_003529346.1| PREDICTED: uncharacterized protein At4g28440-like [Glycine max]
          Length = 146

 Score =  180 bits (456), Expect = 5e-43
 Identities = 91/126 (72%), Positives = 102/126 (80%), Gaps = 1/126 (0%)
 Frame = -2

Query: 822 TPSQNTTTSSVKRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAASQH-LRHTRIA 646
           T  Q       KRK VF KV++LKPGTNGH L  KV+SSNTVLQKGR +S H +R T IA
Sbjct: 5   TKQQQEGEKPAKRKPVFTKVDQLKPGTNGHTLVAKVLSSNTVLQKGRPSSSHNIRPTLIA 64

Query: 645 ECLVGDETGTIVFTARNEQVDMMKAGATVNLRNAKIDMFRGSMRLAVDKWGRVEVTEPAK 466
           ECL+GD+TGTI+FTARNEQVDMMK   TV LRNAKIDMF+GSMRLAVDKWGR+EVT+PAK
Sbjct: 65  ECLIGDDTGTIIFTARNEQVDMMKPDNTVILRNAKIDMFKGSMRLAVDKWGRIEVTDPAK 124

Query: 465 FVAKED 448
           FV KED
Sbjct: 125 FVVKED 130


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