BLASTX nr result

ID: Coptis25_contig00002519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002519
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528115.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   466   e-129
ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   466   e-129
ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]...   460   e-127
ref|XP_002279522.2| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   459   e-127
ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222...   455   e-126

>ref|XP_003528115.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 597

 Score =  466 bits (1200), Expect = e-129
 Identities = 231/337 (68%), Positives = 279/337 (82%), Gaps = 6/337 (1%)
 Frame = +1

Query: 1    PASTVSEVSRQVGLTNPVIAFAVASTASKIPS-LRYGTVFLDSSEFKSML-----VNGVD 162
            P S+ SE++  V L  PVIAF+ ++ A  IPS L++GT+ LDS  F SML     VN   
Sbjct: 170  PLSSQSELTHLVKLAKPVIAFSTSNAAKNIPSSLKFGTILLDSPLFLSMLNNNEYVNADS 229

Query: 163  NRNEVMVNQSDTAAILYSSGTTGRVKGVELTHRNFIALVSGFHAIRPVEENPPHPVAIFT 342
                V V+QSD+AAIL+SSGTTGRVKGV LTHRNFIAL+ GF+ +R V ++ PHPV++FT
Sbjct: 230  RTRRVEVSQSDSAAILFSSGTTGRVKGVLLTHRNFIALIGGFYHLRMVVDDDPHPVSLFT 289

Query: 343  VPLFHVFGFFMCVRAVALGETVVLMEKFDFVGMLKAVESYKVNYMPVSPPLVVAMAKLDV 522
            +PLFHVFGFFM VRA+A+GET+V M +FDF GMLKAVE Y++ YMPVSPPLVVA+AK ++
Sbjct: 290  LPLFHVFGFFMLVRAIAVGETLVFMHRFDFEGMLKAVERYRITYMPVSPPLVVALAKSEL 349

Query: 523  VDKFDLSSLLTVGCGGAPLGKEVSKKFIARFPHVEIVQGYGMTETSGGATRMLGPDETKK 702
            V K+D+SSL  +G GGAPLGKEV++ F A+FP+VEI QGYG+TE+ GGA R+LGPDE+K+
Sbjct: 350  VKKYDMSSLRYLGSGGAPLGKEVAEDFRAQFPNVEIGQGYGLTESGGGAARVLGPDESKR 409

Query: 703  HGSVGRLAENMEAKIVHPDTGEALGPGQRGELWMRGPIIMKGYVGDDEATTSTMDSDGWL 882
            HGSVGRL+ENMEAKIV P TGEAL PGQ+GELW+RGP IMKGYVGD++AT  T+DS+GWL
Sbjct: 410  HGSVGRLSENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDEKATAETLDSEGWL 469

Query: 883  KTGDLCYIDSDGFLYIVDRLKELIKYKAYQVPPAELE 993
            KTGDLCY DSDGFLYIVDRLKELIKYKAYQVPPAELE
Sbjct: 470  KTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELE 506


>ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 580

 Score =  466 bits (1199), Expect = e-129
 Identities = 231/337 (68%), Positives = 277/337 (82%), Gaps = 6/337 (1%)
 Frame = +1

Query: 1    PASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSML-----VNGVDN 165
            P S++SE++  V L  P IAF+ ++ A  IPSL++GT+ LDS  F SML     VN    
Sbjct: 153  PLSSLSELTHIVKLAKPAIAFSTSNAAKNIPSLKFGTILLDSPFFLSMLDDDETVNRDSR 212

Query: 166  RNEVM-VNQSDTAAILYSSGTTGRVKGVELTHRNFIALVSGFHAIRPVEENPPHPVAIFT 342
             + V  V+QSD+AAIL+SSGTTGRVKGV LTHRNFI L+ GF+ +R V +  PHPV++FT
Sbjct: 213  AHRVEEVSQSDSAAILFSSGTTGRVKGVLLTHRNFITLIGGFYHLRNVADGDPHPVSLFT 272

Query: 343  VPLFHVFGFFMCVRAVALGETVVLMEKFDFVGMLKAVESYKVNYMPVSPPLVVAMAKLDV 522
            +PLFHVFGFFM VRA+A+GET+V M++FDF GMLKAVE Y + YMPVSPPLVVA+AK ++
Sbjct: 273  LPLFHVFGFFMLVRAIAVGETLVFMQRFDFEGMLKAVERYGITYMPVSPPLVVALAKSEL 332

Query: 523  VDKFDLSSLLTVGCGGAPLGKEVSKKFIARFPHVEIVQGYGMTETSGGATRMLGPDETKK 702
            V K+DLSSL  +GCGGAPLGKEV+  F  +FP+VEI QGYG+TE+ GGA R+LGPDE+K+
Sbjct: 333  VKKYDLSSLRYLGCGGAPLGKEVADDFRGKFPNVEIGQGYGLTESGGGAARVLGPDESKR 392

Query: 703  HGSVGRLAENMEAKIVHPDTGEALGPGQRGELWMRGPIIMKGYVGDDEATTSTMDSDGWL 882
            HGSVGRLAENMEAKIV P TGEAL PGQ+GELW+RGP IMKGYVGD++AT  T+DS+GWL
Sbjct: 393  HGSVGRLAENMEAKIVDPVTGEALPPGQKGELWLRGPTIMKGYVGDEKATAETLDSEGWL 452

Query: 883  KTGDLCYIDSDGFLYIVDRLKELIKYKAYQVPPAELE 993
            KTGDLCY DSDGFLYIVDRLKELIKYKAYQVPPAELE
Sbjct: 453  KTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELE 489


>ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]
            gi|355491125|gb|AES72328.1| 4-coumarate-coa ligase
            [Medicago truncatula]
          Length = 562

 Score =  460 bits (1184), Expect = e-127
 Identities = 229/338 (67%), Positives = 274/338 (81%), Gaps = 7/338 (2%)
 Frame = +1

Query: 1    PASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLVNGVDNRNE-- 174
            P S+ SE+S  V L NPVIAF+ +STA+KIP L  GTV  DS  F S++ +  D   E  
Sbjct: 134  PLSSPSELSHLVHLINPVIAFSTSSTATKIPKLPLGTVITDSPSFLSVINSTTDTHTELR 193

Query: 175  -VMVNQSDTAAILYSSGTTGRVKGVELTHRNFIALVSGF----HAIRPVEENPPHPVAIF 339
             V+ +QSDTAAIL+SSGTTGRVKGV LTH NFIAL+ GF    HA     E+ PHPV++F
Sbjct: 194  PVVTSQSDTAAILFSSGTTGRVKGVLLTHGNFIALIGGFCFMKHAYDDGIEDEPHPVSLF 253

Query: 340  TVPLFHVFGFFMCVRAVALGETVVLMEKFDFVGMLKAVESYKVNYMPVSPPLVVAMAKLD 519
             +PLFHVFGFFM VRA+A+GET+VLM++FDF GMLKAVE Y++ YMPVSPPL+ A  K +
Sbjct: 254  PLPLFHVFGFFMMVRALAMGETLVLMQRFDFEGMLKAVEKYRITYMPVSPPLITAFTKSE 313

Query: 520  VVDKFDLSSLLTVGCGGAPLGKEVSKKFIARFPHVEIVQGYGMTETSGGATRMLGPDETK 699
            +V K+D+SS+  +G GGAPLGKEV++ F A+FP+VEIVQGYG+TE+ GGA RM+G DE K
Sbjct: 314  LVKKYDISSIRLLGSGGAPLGKEVAESFKAKFPNVEIVQGYGLTESGGGAARMIGFDEAK 373

Query: 700  KHGSVGRLAENMEAKIVHPDTGEALGPGQRGELWMRGPIIMKGYVGDDEATTSTMDSDGW 879
            +HGSVGRLAENMEAKIV P TGEAL PGQ+GELW+RGP IMKGYVGDD+AT  T+DS+GW
Sbjct: 374  RHGSVGRLAENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDDKATVETLDSEGW 433

Query: 880  LKTGDLCYIDSDGFLYIVDRLKELIKYKAYQVPPAELE 993
            LKTGDLCY DSDG+L+IVDRLKELIKYKAYQVPPAELE
Sbjct: 434  LKTGDLCYFDSDGYLFIVDRLKELIKYKAYQVPPAELE 471


>ref|XP_002279522.2| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Vitis vinifera]
          Length = 851

 Score =  459 bits (1181), Expect = e-127
 Identities = 232/333 (69%), Positives = 269/333 (80%), Gaps = 2/333 (0%)
 Frame = +1

Query: 1    PASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLV-NGVDNRNEV 177
            P  + SEVS Q+ L  P IAFA + TA K+PSLR GTV +DS EF SM+  NG      V
Sbjct: 129  PLGSDSEVSHQIHLCKPAIAFASSKTAHKLPSLRLGTVLVDSLEFDSMMTENGAGYGKRV 188

Query: 178  MVNQSDTAAILYSSGTTGRVKGVELTHRNFIALVSGFHAIR-PVEENPPHPVAIFTVPLF 354
             V+QSD AAILYSSGTTGRVKGV LTHRN I L++GFH  R   EE+ P PV++FT+PLF
Sbjct: 189  EVSQSDPAAILYSSGTTGRVKGVLLTHRNLITLIAGFHHNRLEKEEDGPRPVSLFTLPLF 248

Query: 355  HVFGFFMCVRAVALGETVVLMEKFDFVGMLKAVESYKVNYMPVSPPLVVAMAKLDVVDKF 534
            HVFGFFM VRAV+L ET+VLME+FDF  MLKAVE Y++ YMPVSPPLVVA+AK + V K+
Sbjct: 249  HVFGFFMLVRAVSLAETLVLMERFDFENMLKAVEKYRITYMPVSPPLVVALAKSEFVGKY 308

Query: 535  DLSSLLTVGCGGAPLGKEVSKKFIARFPHVEIVQGYGMTETSGGATRMLGPDETKKHGSV 714
            DLSSL  +G GGAPLGKEVS++F ARFP+V++VQGYG+TE+ GGA  M   DE K+HGSV
Sbjct: 309  DLSSLQLLGSGGAPLGKEVSERFSARFPNVQMVQGYGLTESGGGAAGMADLDEAKRHGSV 368

Query: 715  GRLAENMEAKIVHPDTGEALGPGQRGELWMRGPIIMKGYVGDDEATTSTMDSDGWLKTGD 894
            GRL  +MEAKIV P TGEAL PGQ+GELW+RGP IMKGYVGDDEAT +T+D +GWLKTGD
Sbjct: 369  GRLMHDMEAKIVDPKTGEALPPGQQGELWLRGPTIMKGYVGDDEATAATLDQEGWLKTGD 428

Query: 895  LCYIDSDGFLYIVDRLKELIKYKAYQVPPAELE 993
            LCY DSDGFL+IVDRLKELIKYKAYQVPPAELE
Sbjct: 429  LCYFDSDGFLFIVDRLKELIKYKAYQVPPAELE 461


>ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222859381|gb|EEE96928.1|
            acyl:coa ligase [Populus trichocarpa]
          Length = 550

 Score =  455 bits (1170), Expect = e-126
 Identities = 226/336 (67%), Positives = 269/336 (80%), Gaps = 5/336 (1%)
 Frame = +1

Query: 1    PASTVSEVSRQVGLTNPVIAFAVASTASKIPSLRYGTVFLDSSEFKSMLVNGVDNRNE-- 174
            P S+ SE++ Q  L  P IAFA + TA K+PSL  GT+ +DS EF S+L        +  
Sbjct: 124  PLSSDSELAHQFQLCKPKIAFATSQTAHKLPSLPLGTILIDSPEFTSLLTQPKPQAKQPR 183

Query: 175  VMVNQSDTAAILYSSGTTGRVKGVELTHRNFIALVSGFHA-IRPVEENPPH--PVAIFTV 345
            V V+QSD AAILYSSGTTGRVKGV LTHRN IAL+SGFH  ++  E N P   PV++F +
Sbjct: 184  VEVSQSDIAAILYSSGTTGRVKGVALTHRNLIALISGFHHNMKEPEPNQPEQPPVSLFIL 243

Query: 346  PLFHVFGFFMCVRAVALGETVVLMEKFDFVGMLKAVESYKVNYMPVSPPLVVAMAKLDVV 525
            PLFHVFGFFM + A + GET+VLME+FDFV MLK VE Y+V YMPVSPPL+VA  K D+ 
Sbjct: 244  PLFHVFGFFMSINAFSRGETLVLMERFDFVQMLKHVEKYRVTYMPVSPPLIVAFVKSDLT 303

Query: 526  DKFDLSSLLTVGCGGAPLGKEVSKKFIARFPHVEIVQGYGMTETSGGATRMLGPDETKKH 705
            +K+DLSSL ++GCGGAPLGKEV+ KF  +FPHVEIVQGYG+TET GGA+R LGP+ET +H
Sbjct: 304  EKYDLSSLRSLGCGGAPLGKEVADKFKEKFPHVEIVQGYGLTETGGGASRTLGPEETSQH 363

Query: 706  GSVGRLAENMEAKIVHPDTGEALGPGQRGELWMRGPIIMKGYVGDDEATTSTMDSDGWLK 885
             SVGRL+ENMEAKIV P+TGE+LGPGQRGELW+RGP +MKGYVGD++AT  T+  +GWLK
Sbjct: 364  ASVGRLSENMEAKIVDPETGESLGPGQRGELWLRGPTVMKGYVGDEKATAETLHPEGWLK 423

Query: 886  TGDLCYIDSDGFLYIVDRLKELIKYKAYQVPPAELE 993
            TGDLCY DSDGFLYIVDRLKELIKYKA+QVPPAELE
Sbjct: 424  TGDLCYFDSDGFLYIVDRLKELIKYKAFQVPPAELE 459


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