BLASTX nr result
ID: Coptis25_contig00002511
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002511 (1912 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit... 267 6e-69 ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2... 244 6e-62 emb|CBI40211.3| unnamed protein product [Vitis vinifera] 240 8e-61 ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like ... 239 2e-60 ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like... 236 2e-59 >ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera] Length = 228 Score = 267 bits (683), Expect = 6e-69 Identities = 134/209 (64%), Positives = 156/209 (74%), Gaps = 1/209 (0%) Frame = +1 Query: 211 MFSSGVNWVMTAIGFAVSTMFIVFVCSRLVCARIQLNXXXXXXXXXXXXXXXXXXXDLTM 390 M S GVN VMT IGFAVSTMFIVFVC+RLVCARIQLN DL++ Sbjct: 1 MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRS-------DLSI 53 Query: 391 IERRIHGIEPVVVAAFPTKKFGDEFFSTGEDSQCTICLAEYQKKDILRILPYCKHFFHVA 570 +ER +HG+EP VVA FPTKKF DEFFS ED+QCT+CL EYQ +DILRILPYC HFFHV Sbjct: 54 LERGLHGLEPAVVANFPTKKFADEFFSPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVT 113 Query: 571 CIDTWLQQHSTCPVCRISLRDSPERNYVMQPMFSSAIQS-YGMDSLDSHSYDCLYRDHGH 747 CID WLQQHSTCPVCRISL + PER +MQPMFSSA++S +GM+S ++HSY+CL G Sbjct: 114 CIDIWLQQHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGF 173 Query: 748 TSRAFNNSRMEPIQEDQFACELDAAEAGE 834 +SR+ +N RM+PIQEDQF D AEA E Sbjct: 174 SSRSHDNHRMDPIQEDQFGPGGDGAEAQE 202 >ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1| predicted protein [Populus trichocarpa] Length = 227 Score = 244 bits (623), Expect = 6e-62 Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 4/219 (1%) Frame = +1 Query: 211 MFSSGVNWVMTAIGFAVSTMFIVFVCSRLVCARIQLNXXXXXXXXXXXXXXXXXXXDLTM 390 M +SG+N VMT IGF+VSTMFIVFVC+RL+CARIQLN DL+M Sbjct: 1 MMASGINLVMTVIGFSVSTMFIVFVCTRLICARIQLNASRRSFRIASRS-------DLSM 53 Query: 391 IERRIHGIEPVVVAAFPTKKFGDEFFSTGEDSQCTICLAEYQKKDILRILPYCKHFFHVA 570 +ER +HG+EPVV+A+FPTKK+ D+ FS ED+QCT+CLAEY KDILRILPYC H FHV Sbjct: 54 LERGLHGLEPVVIASFPTKKYNDKLFSASEDAQCTVCLAEYHGKDILRILPYCGHSFHVT 113 Query: 571 CIDTWLQQHSTCPVCRISLRDSPERNYVMQPMFSSAIQS-YGMDSLDSHSYDCLYRDHGH 747 CID WLQQHSTCP+CRISLR+ PE+ MQP+FSSAI+S YG ++ DSHSY+ L HG Sbjct: 114 CIDMWLQQHSTCPMCRISLREFPEKKCAMQPLFSSAIRSQYGTETFDSHSYNYLLTGHGI 173 Query: 748 TSRAFNNSRMEPIQEDQFACELDAAEAGEYS---SKSNQ 855 + R+ ++ M+ IQ++ A + D A GE S ++SNQ Sbjct: 174 SQRSDDSHGMDTIQDNLCASDGDEA-CGENSPPLTESNQ 211 >emb|CBI40211.3| unnamed protein product [Vitis vinifera] Length = 209 Score = 240 bits (613), Expect = 8e-61 Identities = 119/190 (62%), Positives = 141/190 (74%), Gaps = 1/190 (0%) Frame = +1 Query: 268 MFIVFVCSRLVCARIQLNXXXXXXXXXXXXXXXXXXXDLTMIERRIHGIEPVVVAAFPTK 447 MFIVFVC+RLVCARIQLN DL+++ER +HG+EP VVA FPTK Sbjct: 1 MFIVFVCTRLVCARIQLNASRRSFPVASRS-------DLSILERGLHGLEPAVVANFPTK 53 Query: 448 KFGDEFFSTGEDSQCTICLAEYQKKDILRILPYCKHFFHVACIDTWLQQHSTCPVCRISL 627 KF DEFFS ED+QCT+CL EYQ +DILRILPYC HFFHV CID WLQQHSTCPVCRISL Sbjct: 54 KFADEFFSPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISL 113 Query: 628 RDSPERNYVMQPMFSSAIQS-YGMDSLDSHSYDCLYRDHGHTSRAFNNSRMEPIQEDQFA 804 + PER +MQPMFSSA++S +GM+S ++HSY+CL G +SR+ +N RM+PIQEDQF Sbjct: 114 WEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDNHRMDPIQEDQFG 173 Query: 805 CELDAAEAGE 834 D AEA E Sbjct: 174 PGGDGAEAQE 183 >ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max] Length = 229 Score = 239 bits (610), Expect = 2e-60 Identities = 118/207 (57%), Positives = 148/207 (71%), Gaps = 1/207 (0%) Frame = +1 Query: 211 MFSSGVNWVMTAIGFAVSTMFIVFVCSRLVCARIQLNXXXXXXXXXXXXXXXXXXXDLTM 390 M SSG+N VMT IGFAVSTMFIVFVC+RL+CARI +N +L+M Sbjct: 1 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHMNTARRSFPIASRS-------NLSM 53 Query: 391 IERRIHGIEPVVVAAFPTKKFGDEFFSTGEDSQCTICLAEYQKKDILRILPYCKHFFHVA 570 +ER HG+E V VA FPTKK+ D+FF+ E+SQCT+CL+EYQ +D+LRILPYC H FHV Sbjct: 54 MERGCHGLERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVT 113 Query: 571 CIDTWLQQHSTCPVCRISLRDSPERNYVMQPMFSSAIQ-SYGMDSLDSHSYDCLYRDHGH 747 CID WLQQ+STCPVCRISLR+ PER +MQP+FSSA+Q YG++S D+H Y C+ D+G Sbjct: 114 CIDLWLQQNSTCPVCRISLREFPERKLLMQPLFSSALQPHYGIESFDTHHYHCMMADNGL 173 Query: 748 TSRAFNNSRMEPIQEDQFACELDAAEA 828 +SR +N + PI+ED F E A A Sbjct: 174 SSRTPDNLGVNPIEEDHFPSEGGGAVA 200 >ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max] Length = 229 Score = 236 bits (602), Expect = 2e-59 Identities = 117/207 (56%), Positives = 147/207 (71%), Gaps = 1/207 (0%) Frame = +1 Query: 211 MFSSGVNWVMTAIGFAVSTMFIVFVCSRLVCARIQLNXXXXXXXXXXXXXXXXXXXDLTM 390 M SSG+N VMT IGFAVSTMFIVFVC+RL+CARI LN +L+M Sbjct: 1 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNAARRSFPIASRS-------NLSM 53 Query: 391 IERRIHGIEPVVVAAFPTKKFGDEFFSTGEDSQCTICLAEYQKKDILRILPYCKHFFHVA 570 +ER HG+E V VA FPTKK+ D+FF+ E+SQCT+CL+EYQ +D+LRILPYC H FHV Sbjct: 54 MERGCHGLERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVT 113 Query: 571 CIDTWLQQHSTCPVCRISLRDSPERNYVMQPMFSSAIQ-SYGMDSLDSHSYDCLYRDHGH 747 CID WLQQ+STCPVCRISLR+ P+R +MQP+FSSA+Q Y ++S D+ Y C+ D+G Sbjct: 114 CIDLWLQQNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIESFDNRHYHCMIADNGL 173 Query: 748 TSRAFNNSRMEPIQEDQFACELDAAEA 828 +SR +N + PI+ED F E D A A Sbjct: 174 SSRTPDNHAVNPIEEDHFPSEGDGAVA 200