BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002509
         (4850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis ...   544   e-151
ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis ...   530   e-147
ref|XP_002529478.1| protein with unknown function [Ricinus commu...   529   e-147
gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]         525   e-146
ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula] g...   513   e-142

>ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
          Length = 444

 Score =  544 bits (1401), Expect = e-151
 Identities = 273/440 (62%), Positives = 327/440 (74%), Gaps = 16/440 (3%)
 Frame = -3

Query: 4803 LEGLGDLSLHLIASKLGAKQCASLCCVNKRLRDSATDDSLWRTFCIQDLHLQEPLDPSAN 4624
            LE LGDL+++ I SKL  K   ++ CV+K+LR SA+++SLW   C QDL L  P+DP   
Sbjct: 5    LEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPLGK 64

Query: 4623 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 4444
            P  SFK  Y+ WR++F  YPWPLVKRVK CWD LKNW + +FPEA  TL+KGA+E +++ 
Sbjct: 65   PAPSFKETYRLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPEADATLRKGATEVEIEA 124

Query: 4443 VEDKLGVNLPLSTKLLYRFCNGQELP--VQDPQFGSPLGIIGGYLFYDHLVNVYLLPLTQ 4270
            +E+ L V LPL T+LLYRFC+GQEL   V     GS LGIIGGY FYDHLVNV LLPL Q
Sbjct: 125  LENILKVKLPLPTRLLYRFCDGQELTDDVGGTALGSSLGIIGGYCFYDHLVNVCLLPLRQ 184

Query: 4269 VITQTK----QFGFSNTSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLSTDGEMMPCV 4102
            VI +TK    Q GFS TSKY++VA+SSTY+ K FFLNC TGQL VGT  L + GEM+PCV
Sbjct: 185  VILETKEITDQLGFSTTSKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSAGEMIPCV 244

Query: 4101 LVPTISQCHD---------MLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSCSTA 3949
                IS  HD         MLLWLEEH RRL++GII+LR EG +RSINLFPE +P CSTA
Sbjct: 245  PNALISPMHDSNTGQQQDAMLLWLEEHVRRLQNGIIKLRNEGMIRSINLFPEESPLCSTA 304

Query: 3948 VTSGVQIRASAVFVPE-LSYLEKGPEYWFSYSIRMSLLSEGCIANGTTFPSCQLYWRHWI 3772
            VT+GVQ+RASAVF+PE  + L++  +Y F+YSIRM LL EGCI NGT+F SCQL WRHWI
Sbjct: 305  VTNGVQVRASAVFIPEGCNLLDESHKYLFAYSIRMRLLPEGCIVNGTSFGSCQLNWRHWI 364

Query: 3771 IRGKDGVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLTNPK 3592
            IR  D VVSEV+ EAVIG+YPLLYP  +EFVYESCTPL S  GS+EG FTFVPGRL +PK
Sbjct: 365  IRANDHVVSEVNAEAVIGKYPLLYPGGEEFVYESCTPLSSSQGSIEGAFTFVPGRLADPK 424

Query: 3591 GGPFMVEVAQFPLQLPDYVY 3532
            G  F VEV +FPLQ PDY++
Sbjct: 425  GSAFEVEVGRFPLQCPDYIF 444


>ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
          Length = 443

 Score =  530 bits (1365), Expect = e-147
 Identities = 267/441 (60%), Positives = 323/441 (73%), Gaps = 17/441 (3%)
 Frame = -3

Query: 4803 LEGLGDLSLHLIASKLGAKQCASLCCVNKRLRDSATDDSLWRTFCIQDLHLQEPLDPSAN 4624
            LE LGDL+++ I SKL AK   ++ CV+K+LR SA+++SLW   C QDL L  P+DP   
Sbjct: 3    LEDLGDLAINAIISKLDAKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPLGK 62

Query: 4623 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 4444
            P  SFK  YQ WR++F  YPWPLVKRVK CWD LKNW + +FP+A  TL+KGA+E +++ 
Sbjct: 63   PAPSFKETYQLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPDADATLRKGATEVEIEA 122

Query: 4443 VEDKLGVNLPLSTKLLYRFCNGQELPVQD---PQFGSPLGIIGGYLFYDHLVNVYLLPLT 4273
            +E+ L V LPL T+LLYRFC+GQEL  +D      G  LGI+GGY   DHLVNV LLPL 
Sbjct: 123  LENILKVKLPLPTRLLYRFCDGQELTEEDVGGTALGGSLGIMGGYCCNDHLVNVCLLPLR 182

Query: 4272 QVITQTK----QFGFSNTSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLSTDGEMMPC 4105
            QVI +TK    Q GFS TSKY++VA+SSTY+ K FFLNC TGQL VGT  L + GEM+PC
Sbjct: 183  QVILETKEITDQLGFSTTSKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSAGEMIPC 242

Query: 4104 VLVPTISQCHD---------MLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSCST 3952
            V    IS  HD         MLLWLEEH RRL++GII+LR+EG +RSINLFPE  P CST
Sbjct: 243  VPNALISPMHDMNTGQQQDAMLLWLEEHVRRLQNGIIKLRKEGMIRSINLFPEEPPLCST 302

Query: 3951 AVTSGVQIRASAVFVPE-LSYLEKGPEYWFSYSIRMSLLSEGCIANGTTFPSCQLYWRHW 3775
            AVT+G+Q+RASAVF+PE  +  +K  +Y F+YSIRM LL EGCI NG +F SCQL WRHW
Sbjct: 303  AVTNGIQVRASAVFIPEGCNLRDKSHKYVFAYSIRMRLLPEGCIVNGISFGSCQLNWRHW 362

Query: 3774 IIRGKDGVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLTNP 3595
            IIR  D VVSEV+ EAVIG+YPLLYP  +EFVYESCT L S  GS+EG FTFVPGRL +P
Sbjct: 363  IIRANDHVVSEVNAEAVIGKYPLLYPGGEEFVYESCTHLSSSRGSIEGAFTFVPGRLADP 422

Query: 3594 KGGPFMVEVAQFPLQLPDYVY 3532
            KG  F VEV +FPLQ PDY++
Sbjct: 423  KGSAFEVEVGRFPLQCPDYIF 443


>ref|XP_002529478.1| protein with unknown function [Ricinus communis]
            gi|223531036|gb|EEF32888.1| protein with unknown function
            [Ricinus communis]
          Length = 446

 Score =  529 bits (1363), Expect = e-147
 Identities = 265/444 (59%), Positives = 322/444 (72%), Gaps = 20/444 (4%)
 Frame = -3

Query: 4803 LEGLGDLSLHLIASKLGAKQCASLCCVNKRLRDSATDDSLWRTFCIQDLHLQEPLDPSAN 4624
            LE +GDL+L+ I S LG ++ A + CV+KRL+ SA+++SLW  FC QDLHL  PLDP  N
Sbjct: 3    LEAVGDLALNEILSILGPEETAIVACVSKRLKASASEESLWSKFCFQDLHLSSPLDPHGN 62

Query: 4623 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 4444
            P  SFK AY +WR+ F+ YPWPLVKRVK CWD LKNW   +FPEA  TLQ+GA+E +++ 
Sbjct: 63   PLPSFKFAYGSWREAFAMYPWPLVKRVKRCWDRLKNWLTTNFPEAAATLQQGATEDEIRR 122

Query: 4443 VEDKLGVNLPLSTKLLYRFCNGQELPVQD---PQFGSPLGIIGGYLFYDHLVNVYLLPLT 4273
             E  L V LPL T++LYRF NGQ    +D      G+ LG+IGGY FY HLVNVYLLPL 
Sbjct: 123  FEKVLEVKLPLPTRVLYRFYNGQVFQEKDALTSAHGNNLGLIGGYAFYHHLVNVYLLPLD 182

Query: 4272 QVITQTKQF-------GFSNTSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLSTDGEM 4114
            QVI +TKQ        G  N++KYIVVA+SS +++K FFLNC  GQL VGT  L  DGEM
Sbjct: 183  QVILETKQIVCHLGISGGFNSTKYIVVAASSAFIEKFFFLNCTNGQLYVGTRNLPIDGEM 242

Query: 4113 MPCVLVPTISQCHD---------MLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPS 3961
            MPCV    +   HD         MLLWLEEHGRRL+ GII+LREE  +R+I  FPE  PS
Sbjct: 243  MPCVPNALLRSVHDPSSDQQRDGMLLWLEEHGRRLQDGIIKLREERNIRTICQFPEEPPS 302

Query: 3960 CSTAVTSGVQIRASAVFVPELSYLEKGPE-YWFSYSIRMSLLSEGCIANGTTFPSCQLYW 3784
            CSTA+T+GV++RASA+FVPE + L+ G + YWF+YSIRMSLL +GCI NG  F SCQL  
Sbjct: 303  CSTAITNGVKVRASAIFVPEAADLDGGSDKYWFAYSIRMSLLPDGCIVNGMYFASCQLQK 362

Query: 3783 RHWIIRGKDGVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRL 3604
            RHWIIR  + VVS+V GE VIG+YP+L P  +EFVYESC PLP+ PGSVEG FTFVP RL
Sbjct: 363  RHWIIRANETVVSDVVGEGVIGKYPVLCPGEQEFVYESCMPLPTSPGSVEGSFTFVPDRL 422

Query: 3603 TNPKGGPFMVEVAQFPLQLPDYVY 3532
            T+PKG PF VEVA+F LQLPDY++
Sbjct: 423  THPKGAPFEVEVARFHLQLPDYIF 446


>gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]
          Length = 443

 Score =  525 bits (1353), Expect = e-146
 Identities = 266/441 (60%), Positives = 320/441 (72%), Gaps = 17/441 (3%)
 Frame = -3

Query: 4803 LEGLGDLSLHLIASKLGAKQCASLCCVNKRLRDSATDDSLWRTFCIQDLHLQEPLDPSAN 4624
            LE +GDL+LH+I SKLGA+  A   CV+ +LR SA+D+SLW  FC +DLHL +PLDP  N
Sbjct: 3    LEAVGDLALHIILSKLGAEDSAKAACVSTKLRASASDESLWSLFCARDLHLSQPLDPLGN 62

Query: 4623 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 4444
               SFK +YQ WR TF  YPW LVKRVK CWD ++NW  I+FPEA  TL+KGASEAD+++
Sbjct: 63   LAPSFKESYQLWRVTFKMYPWSLVKRVKRCWDKIRNWLTINFPEAVSTLKKGASEADIQE 122

Query: 4443 VEDKLGVNLPLSTKLLYRFCNGQ---ELPVQDPQFGSPLGIIGGYLFYDHLVNVYLLPLT 4273
            VE  L V LPL T++LYRF NGQ   E   Q+   G PLG+IGGY FYD LV VYL+PL 
Sbjct: 123  VEKILKVKLPLPTRILYRFHNGQAFEEKHFQNNLVGCPLGLIGGYAFYDQLVTVYLMPLR 182

Query: 4272 QVITQT----KQFGFSNTSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLSTDGEMMPC 4105
            QV+ +T    ++ GF+  S+Y+VVA S  Y  KLFFLNC +GQL VGT  L TDG+M+PC
Sbjct: 183  QVVLETMKIRRKLGFTGRSEYVVVADSCAYSGKLFFLNCTSGQLYVGTRNLPTDGQMLPC 242

Query: 4104 VLVPTISQCHD---------MLLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSCST 3952
            V    IS  HD         MLLWLEEHGRRLE+GII+LR+E   R+I+ FPE +P CST
Sbjct: 243  VPDALISSIHDCNVDRQQDGMLLWLEEHGRRLENGIIKLRQEENFRTISQFPEESPLCST 302

Query: 3951 AVTSGVQIRASAVFVPELSYLEKGPE-YWFSYSIRMSLLSEGCIANGTTFPSCQLYWRHW 3775
            A+T+GV++RASAVFVPE + LE   E Y FSYSIRMS L EGC+ NG  F SCQL  RHW
Sbjct: 303  AITNGVKVRASAVFVPECADLENTSEKYTFSYSIRMSFLPEGCVINGMPFSSCQLNRRHW 362

Query: 3774 IIRGKDGVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLTNP 3595
            IIR  D VV++V GEAVIGQYPLL P  +EFVYES + LPS  GS+EG FTFVPG L  P
Sbjct: 363  IIRSNDVVVADVGGEAVIGQYPLLRPGEEEFVYESYSCLPSSSGSIEGSFTFVPGSLRVP 422

Query: 3594 KGGPFMVEVAQFPLQLPDYVY 3532
            KGGPF V VA+FPLQLP+Y++
Sbjct: 423  KGGPFEVAVARFPLQLPNYIF 443


>ref|XP_003606823.1| F-box protein SKIP16 [Medicago truncatula]
            gi|355507878|gb|AES89020.1| F-box protein SKIP16
            [Medicago truncatula]
          Length = 443

 Score =  513 bits (1321), Expect = e-142
 Identities = 255/441 (57%), Positives = 315/441 (71%), Gaps = 17/441 (3%)
 Frame = -3

Query: 4803 LEGLGDLSLHLIASKLGAKQCASLCCVNKRLRDSATDDSLWRTFCIQDLHLQEPLDPSAN 4624
            LE +GDL++H I   L  +  A + CV+ R +   +DDSLW   C ++L L +P+D   N
Sbjct: 3    LESVGDLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHLGN 62

Query: 4623 PTSSFKVAYQTWRQTFSSYPWPLVKRVKNCWDTLKNWTAIHFPEATHTLQKGASEADLKD 4444
            PT SFK AYQTWR+ F  YPW LVKRVK CWD +K W   +FPEA  TL +GASE ++++
Sbjct: 63   PTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEAKETLCEGASEVEIQE 122

Query: 4443 VEDKLGVNLPLSTKLLYRFCNGQELPVQDPQFGSP---LGIIGGYLFYDHLVNVYLLPLT 4273
            +ED L V LPL T++LYRF NGQE+   D    +    LGIIGGY FYDH VNVYLLP++
Sbjct: 123  LEDVLNVKLPLPTRILYRFHNGQEIEKHDHDTSTSDISLGIIGGYSFYDHFVNVYLLPIS 182

Query: 4272 QVITQTKQF----GFSNTSKYIVVASSSTYVQKLFFLNCVTGQLCVGTSKLSTDGEMMPC 4105
            QVI +T+Q     GF   SKY++VA+SSTY +KLFFLNC  GQL VGT  L T+ ++MPC
Sbjct: 183  QVIQETQQISHNLGFLRRSKYVLVAASSTYREKLFFLNCTNGQLYVGTRNLLTNRDLMPC 242

Query: 4104 VLVPTISQCHDM---------LLWLEEHGRRLESGIIRLREEGKLRSINLFPEAAPSCST 3952
            V    IS  H+M         LLWLEEHGRRL+ G I+L EEG  +SI+LFPE +P CST
Sbjct: 243  VPQNLISLHHEMDSEKIQDAMLLWLEEHGRRLQRGFIKLLEEGNAKSISLFPEESPVCST 302

Query: 3951 AVTSGVQIRASAVFVPELSYLEKGPE-YWFSYSIRMSLLSEGCIANGTTFPSCQLYWRHW 3775
            AVT+GVQIRASA+ VPE   L+   E Y FSYSIRMSL  +GC+ NG +  SCQLYWRHW
Sbjct: 303  AVTNGVQIRASALLVPEGVDLQGDREKYLFSYSIRMSLQPQGCVINGMSHSSCQLYWRHW 362

Query: 3774 IIRGKDGVVSEVDGEAVIGQYPLLYPNRKEFVYESCTPLPSCPGSVEGDFTFVPGRLTNP 3595
            IIR  D VVS+V+GEAVIG YPLL P  KEFVY+SC+PLP+  GS+EG FTFVPGRL +P
Sbjct: 363  IIRANDAVVSDVNGEAVIGMYPLLRPGDKEFVYQSCSPLPTSSGSIEGSFTFVPGRLVDP 422

Query: 3594 KGGPFMVEVAQFPLQLPDYVY 3532
            +G PF+V+VA FPLQLPDY++
Sbjct: 423  RGDPFLVQVAHFPLQLPDYIF 443