BLASTX nr result

ID: Coptis25_contig00002503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002503
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527713.1| PREDICTED: patatin group A-3-like [Glycine max]   275   1e-71
ref|XP_003523595.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   272   1e-70
emb|CBI21444.3| unnamed protein product [Vitis vinifera]              266   5e-69
ref|XP_002277305.1| PREDICTED: patatin group A-3-like [Vitis vin...   266   5e-69
emb|CBI19553.3| unnamed protein product [Vitis vinifera]              264   3e-68

>ref|XP_003527713.1| PREDICTED: patatin group A-3-like [Glycine max]
          Length = 414

 Score =  275 bits (704), Expect = 1e-71
 Identities = 145/218 (66%), Positives = 168/218 (77%), Gaps = 8/218 (3%)
 Frame = -3

Query: 967 MKKTNS--LHLQPARYGNRVSILSXXXXXXXXXXXXXILAFLESQLQKLDGNPDARLADY 794
           M++T S  L +QP  YGN V+ILS             ILAFLE+QLQ+LDG  DARLADY
Sbjct: 1   MERTLSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLEAQLQELDGE-DARLADY 59

Query: 793 FDVIAGTSTGGLVTGMLTAPNENQRPLFAAKDITPFYLEHCPKIFPQNSGLFSSVRNLFT 614
           FDVIAGTSTGG+VT ML+APN+NQRPLFAAKDI PFYLEHCPKIFPQ+SGL+ SV  L  
Sbjct: 60  FDVIAGTSTGGIVTAMLSAPNDNQRPLFAAKDIKPFYLEHCPKIFPQHSGLWGSVGKLLG 119

Query: 613 SATGPKYDGKYLHKLVRDTLKATKLHETLTKVVIPSFDIKRLQPTIFSSYEVKIDPDLDA 434
           S  GPKYDGKYL ++VR+ L  T+LHETLT +VIP+FDIK LQP IFSSY++K  P LDA
Sbjct: 120 SLGGPKYDGKYLKEVVREKLGQTRLHETLTNIVIPTFDIKTLQPIIFSSYQIKRSPCLDA 179

Query: 433 KLSDICIGTSAAPTYLPAYHFK------NGRDFDLVDG 338
           +LSDICI TSAAPTYLPAYHFK      N  +F+L+DG
Sbjct: 180 RLSDICISTSAAPTYLPAYHFKNQDSQGNTHEFNLIDG 217



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 42/65 (64%), Positives = 50/65 (76%)
 Frame = -2

Query: 197 IISLGTGSAKTAEKYNADAASKWGVLGWLTANSSTPIIDCFTQSSADMVDFHLYVAFKAL 18
           IISLGTG+ K  +K+NA  A+KWG+L WLT + STP+ID FTQSSADMVDFHL    +AL
Sbjct: 256 IISLGTGTPKNEQKFNAQMAAKWGLLDWLTNSGSTPLIDVFTQSSADMVDFHLATVTQAL 315

Query: 17  KSEGN 3
            SE N
Sbjct: 316 HSENN 320


>ref|XP_003523595.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Glycine
           max]
          Length = 292

 Score =  272 bits (695), Expect = 1e-70
 Identities = 143/218 (65%), Positives = 166/218 (76%), Gaps = 8/218 (3%)
 Frame = -3

Query: 967 MKKTNS--LHLQPARYGNRVSILSXXXXXXXXXXXXXILAFLESQLQKLDGNPDARLADY 794
           M++T S  L +QP  YGN V+ILS             ILAFLE+QLQ+LDG  DARLADY
Sbjct: 1   MERTLSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLEAQLQELDGE-DARLADY 59

Query: 793 FDVIAGTSTGGLVTGMLTAPNENQRPLFAAKDITPFYLEHCPKIFPQNSGLFSSVRNLFT 614
           FDVIAGTSTGG+VT MLTAPN+NQRPLFAAKDI PFYLEHCPKIFPQ+SGL+ SV  L  
Sbjct: 60  FDVIAGTSTGGIVTAMLTAPNDNQRPLFAAKDIKPFYLEHCPKIFPQHSGLWGSVGKLLR 119

Query: 613 SATGPKYDGKYLHKLVRDTLKATKLHETLTKVVIPSFDIKRLQPTIFSSYEVKIDPDLDA 434
           S  GPKY+GKYL ++VR+ +  T+LHETLT +VIP+FDIK LQP IFSSY++K  P LDA
Sbjct: 120 SLGGPKYNGKYLQEVVREKVGETRLHETLTNIVIPTFDIKTLQPIIFSSYQIKRSPCLDA 179

Query: 433 KLSDICIGTSAAPTYLPAYHFKNG------RDFDLVDG 338
           +LSDICI TSAAPTYLPAYHF N         F+L+DG
Sbjct: 180 RLSDICISTSAAPTYLPAYHFNNKDSEGNMHQFNLIDG 217


>emb|CBI21444.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  266 bits (681), Expect = 5e-69
 Identities = 135/213 (63%), Positives = 164/213 (76%), Gaps = 6/213 (2%)
 Frame = -3

Query: 958 TNSLHLQPARYGNRVSILSXXXXXXXXXXXXXILAFLESQLQKLDGNPDARLADYFDVIA 779
           ++SL ++P   GN ++ILS             ILAFLES+LQKLDG  DARLADYFDVIA
Sbjct: 7   SSSLQIKPPARGNLITILSIDGGGVRGIIPGIILAFLESELQKLDGE-DARLADYFDVIA 65

Query: 778 GTSTGGLVTGMLTAPNENQRPLFAAKDITPFYLEHCPKIFPQNSGLFSSVRNLFTSATGP 599
           GTSTGGL+T MLTAPN+  RPL+AA  I PFYLE+CPKIFP  SG+F ++ NLF   TGP
Sbjct: 66  GTSTGGLITAMLTAPNQENRPLYAASGIKPFYLENCPKIFPPRSGIFGTIVNLFKVLTGP 125

Query: 598 KYDGKYLHKLVRDTLKATKLHETLTKVVIPSFDIKRLQPTIFSSYEVKIDPDLDAKLSDI 419
           KYDGKYLH L+++ L   +LH+TLT VVIP+FDIK+LQPTIFSSY+V I+P LDAKLSDI
Sbjct: 126 KYDGKYLHNLLKNVLGDKRLHQTLTNVVIPTFDIKKLQPTIFSSYQVAINPALDAKLSDI 185

Query: 418 CIGTSAAPTYLPAYHF------KNGRDFDLVDG 338
           CIGTSAAPTYLPA++F      +N  +F+L+DG
Sbjct: 186 CIGTSAAPTYLPAHYFENQDDQENNEEFNLIDG 218



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 38/65 (58%), Positives = 45/65 (69%)
 Frame = -2

Query: 197 IISLGTGSAKTAEKYNADAASKWGVLGWLTANSSTPIIDCFTQSSADMVDFHLYVAFKAL 18
           +IS+GTGSAK   KY A  A+KWGVLGWL  N ST +    + +SADMVDFH  V F+AL
Sbjct: 257 VISVGTGSAKEEYKYTAKMAAKWGVLGWLYDNGSTLLSPRVSGASADMVDFHNCVVFEAL 316

Query: 17  KSEGN 3
            SE N
Sbjct: 317 HSEEN 321


>ref|XP_002277305.1| PREDICTED: patatin group A-3-like [Vitis vinifera]
          Length = 407

 Score =  266 bits (681), Expect = 5e-69
 Identities = 135/213 (63%), Positives = 164/213 (76%), Gaps = 6/213 (2%)
 Frame = -3

Query: 958 TNSLHLQPARYGNRVSILSXXXXXXXXXXXXXILAFLESQLQKLDGNPDARLADYFDVIA 779
           ++SL ++P   GN ++ILS             ILAFLES+LQKLDG  DARLADYFDVIA
Sbjct: 7   SSSLQIKPPARGNLITILSIDGGGVRGIIPGIILAFLESELQKLDGE-DARLADYFDVIA 65

Query: 778 GTSTGGLVTGMLTAPNENQRPLFAAKDITPFYLEHCPKIFPQNSGLFSSVRNLFTSATGP 599
           GTSTGGL+T MLTAPN+  RPL+AA  I PFYLE+CPKIFP  SG+F ++ NLF   TGP
Sbjct: 66  GTSTGGLITAMLTAPNQENRPLYAASGIKPFYLENCPKIFPPRSGIFGTIVNLFKVLTGP 125

Query: 598 KYDGKYLHKLVRDTLKATKLHETLTKVVIPSFDIKRLQPTIFSSYEVKIDPDLDAKLSDI 419
           KYDGKYLH L+++ L   +LH+TLT VVIP+FDIK+LQPTIFSSY+V I+P LDAKLSDI
Sbjct: 126 KYDGKYLHNLLKNVLGDKRLHQTLTNVVIPTFDIKKLQPTIFSSYQVAINPALDAKLSDI 185

Query: 418 CIGTSAAPTYLPAYHF------KNGRDFDLVDG 338
           CIGTSAAPTYLPA++F      +N  +F+L+DG
Sbjct: 186 CIGTSAAPTYLPAHYFENQDDQENNEEFNLIDG 218



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 38/65 (58%), Positives = 45/65 (69%)
 Frame = -2

Query: 197 IISLGTGSAKTAEKYNADAASKWGVLGWLTANSSTPIIDCFTQSSADMVDFHLYVAFKAL 18
           +IS+GTGSAK   KY A  A+KWGVLGWL  N ST ++     +SADMVDFH  V F+AL
Sbjct: 257 VISVGTGSAKEEYKYTAKMAAKWGVLGWLYDNGST-LLSPRVSASADMVDFHNCVVFEAL 315

Query: 17  KSEGN 3
            SE N
Sbjct: 316 HSEEN 320


>emb|CBI19553.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  264 bits (674), Expect = 3e-68
 Identities = 137/220 (62%), Positives = 162/220 (73%), Gaps = 6/220 (2%)
 Frame = -3

Query: 979 ESVLMKKTNSLHLQPARYGNRVSILSXXXXXXXXXXXXXILAFLESQLQKLDGNPDARLA 800
           E   M+K+    +QP  YGN V+ILS             ILA LESQLQ+LDG+ DAR+A
Sbjct: 43  EKKKMEKSLLPQIQPPTYGNLVTILSIDGGGIRGIIPATILACLESQLQELDGD-DARIA 101

Query: 799 DYFDVIAGTSTGGLVTGMLTAPNENQRPLFAAKDITPFYLEHCPKIFPQNSGLFSSVRNL 620
           DYFDVIAGTSTGGLVT MLTAPN+ +RPLFAAKDI PFYL+H PKIFPQ  G+F  + N+
Sbjct: 102 DYFDVIAGTSTGGLVTAMLTAPNDEKRPLFAAKDIKPFYLKHGPKIFPQRRGIFGWIMNI 161

Query: 619 FTSATGPKYDGKYLHKLVRDTLKATKLHETLTKVVIPSFDIKRLQPTIFSSYEVKIDPDL 440
           F S  GP YDGKYLH L+++ L  T+LH+TLT VVIP+FDIK LQP+IFSSYEVK  P L
Sbjct: 162 FRSIVGPNYDGKYLHNLIKEKLGRTRLHQTLTSVVIPTFDIKSLQPSIFSSYEVKRSPSL 221

Query: 439 DAKLSDICIGTSAAPTYLPAYHFKN------GRDFDLVDG 338
           DA L+DICIG+SAAPTY PAY FKN       R+ +L+DG
Sbjct: 222 DAPLADICIGSSAAPTYFPAYFFKNQDKEGKARELNLIDG 261



 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 42/65 (64%), Positives = 52/65 (80%)
 Frame = -2

Query: 197 IISLGTGSAKTAEKYNADAASKWGVLGWLTANSSTPIIDCFTQSSADMVDFHLYVAFKAL 18
           +IS+GTGS K+ +KYNA  A+KWGVLGWL    STP++D FTQ+SADMVDFH+ V F+AL
Sbjct: 300 VISIGTGSPKSEQKYNAKMAAKWGVLGWLLHGGSTPLVDVFTQASADMVDFHISVVFQAL 359

Query: 17  KSEGN 3
            SE N
Sbjct: 360 HSEDN 364


Top