BLASTX nr result

ID: Coptis25_contig00002501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002501
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237514.1| uncharacterized protein LOC100305587 [Glycin...    84   1e-14
ref|XP_002269657.1| PREDICTED: 40S ribosomal protein S19-1 [Viti...    84   1e-14
gb|AFK42492.1| unknown [Lotus japonicus]                               82   6e-14
ref|XP_003543943.1| PREDICTED: 40S ribosomal protein S19-1-like ...    82   6e-14
ref|NP_001235424.1| uncharacterized protein LOC100527647 [Glycin...    82   6e-14

>ref|NP_001237514.1| uncharacterized protein LOC100305587 [Glycine max]
           gi|255625993|gb|ACU13341.1| unknown [Glycine max]
          Length = 143

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +2

Query: 113 LSPHEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYD 235
           +SPHEFVKAYSSHLKRSGKMELP+WTDIVKTA FKELAPYD
Sbjct: 10  VSPHEFVKAYSSHLKRSGKMELPEWTDIVKTARFKELAPYD 50


>ref|XP_002269657.1| PREDICTED: 40S ribosomal protein S19-1 [Vitis vinifera]
           gi|147798403|emb|CAN70140.1| hypothetical protein
           VITISV_032083 [Vitis vinifera]
           gi|297738070|emb|CBI27271.3| unnamed protein product
           [Vitis vinifera]
          Length = 146

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +2

Query: 113 LSPHEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYD 235
           +SPHEFVKAYSSHLKRSGK+ELP WTDIVKTATFKELAPYD
Sbjct: 13  VSPHEFVKAYSSHLKRSGKIELPHWTDIVKTATFKELAPYD 53


>gb|AFK42492.1| unknown [Lotus japonicus]
          Length = 144

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +2

Query: 113 LSPHEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYD 235
           +SPHEFVKAY++HLKRSGKMELP+WTDIVKTA FKELAPYD
Sbjct: 10  VSPHEFVKAYAAHLKRSGKMELPEWTDIVKTARFKELAPYD 50


>ref|XP_003543943.1| PREDICTED: 40S ribosomal protein S19-1-like [Glycine max]
          Length = 143

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +2

Query: 113 LSPHEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYD 235
           +SPH+FVKAY+SHLKRSGKMELP+WTDIVKTA FKELAPYD
Sbjct: 10  VSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYD 50


>ref|NP_001235424.1| uncharacterized protein LOC100527647 [Glycine max]
           gi|255632850|gb|ACU16778.1| unknown [Glycine max]
          Length = 143

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +2

Query: 113 LSPHEFVKAYSSHLKRSGKMELPQWTDIVKTATFKELAPYD 235
           +SPH+FVKAY+SHLKRSGKMELP+WTDIVKTA FKELAPYD
Sbjct: 10  VSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYD 50


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