BLASTX nr result

ID: Coptis25_contig00002498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002498
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143285.1| PREDICTED: histone H2B.4-like [Cucumis sativ...   167   1e-39
gb|ABB72812.1| histone H2B-like protein [Solanum tuberosum]           167   1e-39
gb|AFK49087.1| unknown [Lotus japonicus]                              167   1e-39
gb|AFK45369.1| unknown [Lotus japonicus]                              167   1e-39
gb|AFK45166.1| unknown [Lotus japonicus]                              167   1e-39

>ref|XP_004143285.1| PREDICTED: histone H2B.4-like [Cucumis sativus]
           gi|449482391|ref|XP_004156268.1| PREDICTED: histone
           H2B.4-like [Cucumis sativus]
          Length = 139

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +3

Query: 3   IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 182
           IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV
Sbjct: 54  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 113

Query: 183 RLVLPGELAKHAVSEGTKAVTKFTSS 260
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 114 RLVLPGELAKHAVSEGTKAVTKFTSS 139


>gb|ABB72812.1| histone H2B-like protein [Solanum tuberosum]
          Length = 146

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +3

Query: 3   IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 182
           IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV
Sbjct: 61  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 120

Query: 183 RLVLPGELAKHAVSEGTKAVTKFTSS 260
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 RLVLPGELAKHAVSEGTKAVTKFTSS 146


>gb|AFK49087.1| unknown [Lotus japonicus]
          Length = 140

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +3

Query: 3   IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 182
           IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV
Sbjct: 55  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 114

Query: 183 RLVLPGELAKHAVSEGTKAVTKFTSS 260
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 115 RLVLPGELAKHAVSEGTKAVTKFTSS 140


>gb|AFK45369.1| unknown [Lotus japonicus]
          Length = 109

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +3

Query: 3   IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 182
           IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV
Sbjct: 24  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 83

Query: 183 RLVLPGELAKHAVSEGTKAVTKFTSS 260
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 84  RLVLPGELAKHAVSEGTKAVTKFTSS 109


>gb|AFK45166.1| unknown [Lotus japonicus]
          Length = 139

 Score =  167 bits (422), Expect = 1e-39
 Identities = 86/86 (100%), Positives = 86/86 (100%)
 Frame = +3

Query: 3   IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 182
           IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV
Sbjct: 54  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 113

Query: 183 RLVLPGELAKHAVSEGTKAVTKFTSS 260
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 114 RLVLPGELAKHAVSEGTKAVTKFTSS 139


Top