BLASTX nr result
ID: Coptis25_contig00002496
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002496
(1045 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca... 107 6e-29
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich... 105 9e-27
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta... 94 7e-26
ref|XP_002332098.1| cc-nbs-lrr resistance protein [Populus trich... 102 6e-24
emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera] 90 2e-23
>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 906
Score = 107 bits (267), Expect(2) = 6e-29
Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Frame = -2
Query: 807 LNFLKGRLYITGLRHVKSGNEAKQAKLQKKKNISTLGL--NFGDREFFPPLILRDQVSSE 634
LN L+G L I+GL V++ NE +A L+ K+++ +L L +FG +E
Sbjct: 694 LNHLRGHLEISGLEKVRNVNEVMEANLKNKEHLRSLDLAFSFGGQEL------------- 740
Query: 633 EEIRRMEGVLENLEPHKERLERLEIRKYVGFTLPPWMLSVEESVLSNITYLQLCECPNLK 454
+ VLE L+PH LE L + Y G LP WM ++L+ + L+L C N K
Sbjct: 741 -----ITNVLEALQPHPN-LEALLVYDYGGSILPSWM-----TLLTKMKDLKLLRCVNCK 789
Query: 453 MLPALGKLQFLEELSLMDLSAVK-----HLGADLLTVGNGDXXXXXXXXSVVLFPKLKKL 289
LP+LGKL LE+L + + VK LG D +T N SVVLFPKLK+L
Sbjct: 790 ELPSLGKLPSLEKLLIGHFNNVKCVSVEFLGIDPVTDQNS------ITESVVLFPKLKEL 843
Query: 288 QLWTLPEWEKEEHDVPTTTSDNTTIIIMPRLHELWIQECPKLKVEPHYLFPPQLESVLL 112
+ EWE + TTT+ T MP L L + +CPKLK P L LE +++
Sbjct: 844 TFRYMVEWENWD---TTTTTSAATRRTMPCLRSLSLYDCPKLKAIPEGLKQRPLEELII 899
Score = 47.4 bits (111), Expect(2) = 6e-29
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = -1
Query: 1045 NLQTLKLTSCDNLRKLPEGIGELSNLRHLEVEYTPSLKYYPRG 917
NL LKL C L +LP G+G+L NLR+L +E T SL P+G
Sbjct: 622 NLLALKLHGCRRLHRLPRGLGKLINLRYLNIEETESLSVLPQG 664
>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 945
Score = 105 bits (262), Expect(2) = 9e-27
Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 5/239 (2%)
Frame = -2
Query: 807 LNFLKGRLYITGLRH-VKSGNEAKQAKLQKKKNISTLGLNFGDREFFPPLILRDQVSSEE 631
LN + G L I L ++ ++A +A+L+ KK + L L F DRE +
Sbjct: 707 LNHIGGSLNIRNLGGGIEDASDAAEAQLKNKKRLRRLELVF-DRE-------------KT 752
Query: 630 EIRRMEG-VLENLEPHKERLERLEIRKYVGFTLPPWMLSVEESVLSNITYLQLCECPNLK 454
E++ EG ++E L+P LE L I Y GF LP WM++ L+ + L+L +C L+
Sbjct: 753 ELQANEGSLIEALQP-PSNLEYLTISSYGGFDLPNWMMT-----LTRLLALELHDCTKLE 806
Query: 453 MLPALGKLQFLEELSLMDLSAVKHLGADLLTVGNGDXXXXXXXXS--VVLFPKLKKLQLW 280
+LP LG+L LE L+L L V+ L A L + + V FPKLK L++W
Sbjct: 807 VLPPLGRLPNLERLALRSLK-VRRLDAGFLGIEKDENASINEGEIARVTAFPKLKILEIW 865
Query: 279 TLPEWEK-EEHDVPTTTSDNTTIIIMPRLHELWIQECPKLKVEPHYLFPPQLESVLLQG 106
+ EW+ E V + T+I IMP+L +L I CP L+ P Y+ L+ + + G
Sbjct: 866 NIKEWDGIERRSVGEEDATTTSISIMPQLRQLTIHNCPLLRALPDYVLAAPLQELYIGG 924
Score = 42.0 bits (97), Expect(2) = 9e-27
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = -1
Query: 1045 NLQTLKLTSCDNLRKLPEGIGELSNLRHLEVEYTPSLKYYPRGGIER 905
NLQ+L +T C +L++LP IG+L LRHL + Y + + P+ GIER
Sbjct: 632 NLQSLDVTWCRSLKELPNAIGKLIKLRHLRI-YRSGVDFIPK-GIER 676
>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
gi|223542676|gb|EEF44213.1| leucine-rich
repeat-containing protein, putative [Ricinus communis]
Length = 940
Score = 93.6 bits (231), Expect(2) = 7e-26
Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Frame = -2
Query: 807 LNFLKGRLYITGLRHVKSGNEAKQAKLQKKKNISTLGL--NFGDREFFPPLILRDQVSSE 634
L +L+G L I+ L V ++AK+A L K ++ +L L +FG +E
Sbjct: 710 LKYLRGHLEISRLEKVVDTDKAKEADLTNK-HLQSLDLVFSFGVKE-------------- 754
Query: 633 EEIRRMEGVLENLEPHKERLERLEIRKYVGFTLPPWMLSVEESVLSNITYLQLCECPNLK 454
ME V+E L+PH E LE L++ Y G P W+ ++L+ + +L+L C N
Sbjct: 755 ----AMENVIEVLQPHPE-LEALQVYDYGGSIFPNWI-----TLLTKLKHLRLLSCINCL 804
Query: 453 MLPALGKLQFLEELSLMDLSAVKHLGADLLTVGNGDXXXXXXXXSVVLFPKLKKLQLWTL 274
LP LGKL LE+L + +++K + A+LL G S V FPKL +L +
Sbjct: 805 QLPPLGKLPSLEKLLIGHFNSLKSVSAELL--GIDPVTDVYCKESFVAFPKLNELTFRFM 862
Query: 273 PEWEKEEHDVPTT--------TSDNTTII---IMPRLHELWIQECPKLKVEPHYLFPPQL 127
EWE E ++ +S N + + MP L L + +CPKLK P YL L
Sbjct: 863 VEWENWEEITTSSAVAGSSSCSSCNVSAVTRRAMPCLRSLSLYDCPKLKAVPEYLHLLPL 922
Query: 126 ESVLL 112
E +++
Sbjct: 923 EELII 927
Score = 50.8 bits (120), Expect(2) = 7e-26
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = -1
Query: 1045 NLQTLKLTSCDNLRKLPEGIGELSNLRHLEVEYTPSLKYYPRGGIER 905
NLQTL L C L++LP G+G+L NLRHL + T L +P+ GIER
Sbjct: 638 NLQTLNLDRCKRLQRLPGGLGKLKNLRHLNLRETDCLNIFPQ-GIER 683
>ref|XP_002332098.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222874918|gb|EEF12049.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 922
Score = 102 bits (253), Expect(2) = 6e-24
Identities = 78/227 (34%), Positives = 116/227 (51%), Gaps = 5/227 (2%)
Frame = -2
Query: 807 LNFLKGRLYITGLRHVKSGNEAKQAKLQKKKNISTLGLNFGDREFFPPLILRDQVSSEEE 628
LN L+G L I L VK NE K+A+++ KK+++ L L FF R++++ +E
Sbjct: 676 LNHLQGSLTIKWLGDVKDPNEVKKAEMKSKKHLTRLDL------FFQSRTDREKINDDE- 728
Query: 627 IRRMEGVLENLEPHKERLERLEIRKYVGFTLPPWMLSVEESVLSNITYLQLCECPNLKML 448
VLE LEP LE L++ Y G ++ V S ++ + ++L + ++ L
Sbjct: 729 ------VLEALEP-PPNLESLDLSNYQG------IIPVFPSCINKLRVVRLWDWGKIENL 775
Query: 447 PALGKLQFLEELSLMDLSAVKHLGADLL--TVGNGDXXXXXXXXSVVLFPKLKKLQL-WT 277
P LGKL LEEL++ D+ V +G + L V + +++ FPKLK L W
Sbjct: 776 PPLGKLPSLEELTVGDMECVGRVGREFLGLRVDSKGEMTSSSSNTIIAFPKLKSLSFRWM 835
Query: 276 L--PEWEKEEHDVPTTTSDNTTIIIMPRLHELWIQECPKLKVEPHYL 142
EWE E T+ + + IIMP LH L I ECPKLK P Y+
Sbjct: 836 TNWEEWEGGEGGNEDKTNISISTIIMPSLHSLRIWECPKLKALPDYV 882
Score = 35.8 bits (81), Expect(2) = 6e-24
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 1045 NLQTLKLTSCDNLRKLPEGIGELSNLRHLEVE-YTPSLKYYPRGGIE 908
N+ TL ++ C+ L +LP+ +G L LRHL V Y + G+E
Sbjct: 602 NMLTLNVSFCEKLERLPDNMGRLVKLRHLRVGIYWDDSSFVKMSGVE 648
>emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera]
Length = 970
Score = 90.1 bits (222), Expect(2) = 2e-23
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 4/223 (1%)
Frame = -2
Query: 807 LNFLKGRLYITGLRHVKSGNEAKQAKLQKKKNISTLGLNFGDREFFPPLILRDQVSSEE- 631
L+ L+G L I GL++V++ EA++A L+ K +I L L F +E ++ + S
Sbjct: 729 LSNLRGELEIRGLQNVENAREAREANLKNKIHIHHLTLVFDPQEGTNYVVGAPRSYSTNL 788
Query: 630 --EIRR-MEGVLENLEPHKERLERLEIRKYVGFTLPPWMLSVEESVLSNITYLQLCECPN 460
E+++ + V+E L+PH L+ L IR Y P WM+ S L+ + L+L C +
Sbjct: 789 LPEVKKGPKSVVEALQPHPN-LKSLCIRGYGDTEWPGWMM---RSSLTQLKNLELSCCSD 844
Query: 459 LKMLPALGKLQFLEELSLMDLSAVKHLGADLLTVGNGDXXXXXXXXSVVLFPKLKKLQLW 280
+P LG+L LE L + + VKH+G + L + + FPKLKKL
Sbjct: 845 CLCMPPLGELPVLETLEIKGVERVKHIGGEFLRSSS-----------TIAFPKLKKLTFR 893
Query: 279 TLPEWEKEEHDVPTTTSDNTTIIIMPRLHELWIQECPKLKVEP 151
+ EWEK E + +IM L L I +CPKL+ P
Sbjct: 894 NMKEWEKWE------VIEEEKRLIMSCLSYLGIHKCPKLEGLP 930
Score = 46.2 bits (108), Expect(2) = 2e-23
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = -1
Query: 1045 NLQTLKLTSCDNLRKLPEGIGELSNLRHLEVEYTPSLKYYPRG 917
NLQTL + CD+L +LP+ +G+L NLRHL+ T LK P+G
Sbjct: 656 NLQTLNIRGCDSLVQLPQAMGKLINLRHLQNFLTILLKGLPKG 698