BLASTX nr result

ID: Coptis25_contig00002489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002489
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV29178.1| disease resistance protein R3a-like protein [Sola...    85   5e-15
gb|ADH94055.1| putative disease resistance protein R3 [Solanum b...    81   8e-14
gb|AEV89970.1| CC-NBS-LRR protein kinase [Solanum stoloniferum]        81   8e-14
gb|ABI34374.1| Disease resistance protein I2C-5, putative [Solan...    80   1e-13
gb|AAU90299.1| Putative disease resistance protein I2C-5, identi...    80   1e-13

>gb|ABV29178.1| disease resistance protein R3a-like protein [Solanum demissum]
          Length = 1270

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/76 (48%), Positives = 51/76 (67%)
 Frame = -1

Query: 233 LVWNDEGVNRVKIDFDVLGNLEPHRNLKVLWIKGYRDNRFPRWMMDPLFPNLVVIGLVQC 54
           L W++   +  + + D+L +L PH N+K L I GYR  +FP W+ DPLF  LV + L  C
Sbjct: 737 LEWSESSADNSQTERDILDDLHPHTNIKELRITGYRGKKFPNWLADPLFLKLVKLSLRNC 796

Query: 53  RNCQNLPALGQLPSLK 6
           ++C +LPALGQLPSLK
Sbjct: 797 KDCDSLPALGQLPSLK 812


>gb|ADH94055.1| putative disease resistance protein R3 [Solanum bulbocastanum]
           gi|296936133|gb|ADH94056.1| putative disease resistance
           protein R3 [Solanum stoloniferum]
          Length = 460

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 LVWNDEG-VNRVKIDFDVLGNLEPHRNLKVLWIKGYRDNRFPRWMMDPLFPNLVVIGLVQ 57
           L W+  G  +  + + D+L  L PH+N+KV+ I GYR   FP W+ DPLF  LV + L  
Sbjct: 180 LEWSGSGSADNSQTERDILDELRPHKNIKVVKITGYRGTNFPNWLADPLFLKLVKLSLRN 239

Query: 56  CRNCQNLPALGQLPSLK 6
           C+NC ++PALGQLP LK
Sbjct: 240 CKNCYSMPALGQLPFLK 256


>gb|AEV89970.1| CC-NBS-LRR protein kinase [Solanum stoloniferum]
          Length = 1282

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 LVWNDEG-VNRVKIDFDVLGNLEPHRNLKVLWIKGYRDNRFPRWMMDPLFPNLVVIGLVQ 57
           L W+  G  +  + + D+L  L PH+N+KV+ I GYR   FP W+ DPLF  LV + L  
Sbjct: 739 LEWSGSGSADNSQTERDILDELRPHKNIKVVKITGYRGTNFPNWLADPLFLKLVKLSLRN 798

Query: 56  CRNCQNLPALGQLPSLK 6
           C+NC ++PALGQLP LK
Sbjct: 799 CKNCYSMPALGQLPFLK 815


>gb|ABI34374.1| Disease resistance protein I2C-5, putative [Solanum demissum]
          Length = 1213

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 LVWNDEG-VNRVKIDFDVLGNLEPHRNLKVLWIKGYRDNRFPRWMMDPLFPNLVVIGLVQ 57
           L W++    +  + + D+L  L PH+N+K + I GYR  +FP W+ DPLF  LV + +V 
Sbjct: 724 LEWSESSSADNSQTERDILDELSPHKNIKEVKITGYRGTKFPNWLADPLFLKLVQLSVVN 783

Query: 56  CRNCQNLPALGQLPSLK 6
           C+NC +LP+LGQLP LK
Sbjct: 784 CKNCSSLPSLGQLPCLK 800


>gb|AAU90299.1| Putative disease resistance protein I2C-5, identical [Solanum
           demissum]
          Length = 1266

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 LVWNDEG-VNRVKIDFDVLGNLEPHRNLKVLWIKGYRDNRFPRWMMDPLFPNLVVIGLVQ 57
           L W++    +  + + D+L  L PH+N+K + I GYR  +FP W+ DPLF  LV + +V 
Sbjct: 741 LEWSESSSADNSQTERDILDELSPHKNIKEVKITGYRGTKFPNWLADPLFLKLVQLSVVN 800

Query: 56  CRNCQNLPALGQLPSLK 6
           C+NC +LP+LGQLP LK
Sbjct: 801 CKNCSSLPSLGQLPCLK 817