BLASTX nr result

ID: Coptis25_contig00002487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002487
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273621.1| PREDICTED: putative disease resistance prote...   187   3e-45
ref|XP_002519373.1| leucine-rich repeat containing protein, puta...   183   5e-44
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   179   5e-43
ref|XP_003634908.1| PREDICTED: putative disease resistance prote...   174   2e-41
emb|CAN83754.1| hypothetical protein VITISV_032967 [Vitis vinifera]   173   5e-41

>ref|XP_002273621.1| PREDICTED: putative disease resistance protein RGA1 [Vitis vinifera]
            gi|147842093|emb|CAN62651.1| hypothetical protein
            VITISV_003942 [Vitis vinifera]
          Length = 1129

 Score =  187 bits (475), Expect = 3e-45
 Identities = 119/294 (40%), Positives = 171/294 (58%), Gaps = 11/294 (3%)
 Frame = +2

Query: 2    YPKDWVISKQALILLWMAQGFVHTLGENQILEDIGNVYVKDLMWRSFFQEAELDFLGQIL 181
            +PKD+ I K+ L+ LWMAQG++    EN  LED+G+ Y +DL  RS FQEAE D    +L
Sbjct: 433  FPKDYRIEKKLLVQLWMAQGYLQASDENNDLEDVGDQYFEDLFSRSLFQEAEKDAYNNVL 492

Query: 182  NLKMHDLVHDLAQSVAGTEYFIAGKETEGDIPNGVRHLHCVEEDLPVEFRESLRKHTNLR 361
            + KMHDL+HDLAQS+  +E  I     E +IP  + H+   +  +P+     ++    L 
Sbjct: 493  SCKMHDLIHDLAQSIVKSEVIILTNYVE-NIPKRIHHVSLFKRSVPMPKDLMVKPIRTLF 551

Query: 362  TLLFNSKFLTEDILSSFKCLRVLRLL-VETGEVPSSIGKLKRLRYLRIESDSVTTVPNSI 538
             L          ++SSFKCLRV++L+ + + +  +S+ KL  LRYL + S     +P++I
Sbjct: 552  VLSNPGSNRIARVISSFKCLRVMKLIGLLSLDALTSLAKLSHLRYLDLSSGCFEILPSAI 611

Query: 539  TKLQSLETLILL-CSKITLLPGEIWKLQKLEHIYLHKDTVLTYMPSGLSHLTSIRTLRDF 715
            T+L+ L+TL L  C  +  LPG + KL  L H+ + K+  LTYMP GL  LT ++TL  F
Sbjct: 612  TRLKHLQTLKLFHCQHLKELPGNMKKLINLRHLEIDKNNRLTYMPCGLGELTMLQTLPLF 671

Query: 716  FVG--------KGIGCKLNELNGLIHLKDFLGIFNLENV-SSARDCVEANLKGK 850
            FVG        K IG +L+EL  L  L+  L I  L +V  SA +  EANL+GK
Sbjct: 672  FVGNDCEESRQKRIG-RLSELKCLDSLRGELRIEGLSDVRGSALEAKEANLEGK 724


>ref|XP_002519373.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223541440|gb|EEF42990.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1208

 Score =  183 bits (464), Expect = 5e-44
 Identities = 119/298 (39%), Positives = 172/298 (57%), Gaps = 15/298 (5%)
 Frame = +2

Query: 2    YPKDWVISKQALILLWMAQGFVHTLGENQILEDIGNVYVKDLMWRSFFQEAELDFLGQIL 181
            +PK+++I K  LI LW+A G++H+   NQ LED+G+ Y KDL+ RSFFQE E D  G I 
Sbjct: 435  FPKEYIIQKDLLIQLWIAHGYIHSTNGNQHLEDLGDQYFKDLLARSFFQEVETDEYGHIK 494

Query: 182  NLKMHDLVHDLAQSVAGTEYFIAGKETEGDIPNGVRHLHCVEEDLPVEFRESLRKHTNLR 361
              KMHDL+H LAQ VAGT+  IAG + E +I   V H+  ++     E  + L +  ++R
Sbjct: 495  TFKMHDLMHGLAQVVAGTDCAIAGTDVE-NISERVHHVSVLQPSYSPEVAKHLLEAKSMR 553

Query: 362  TLLFNSKF-LTED-----ILSSFKCLRVLRLLVE-TGEVPSSIGKLKRLRYLRI-ESDSV 517
            TL     +  TE+     ++S FKCLR L L      ++P +IGKLK LRYL + ++   
Sbjct: 554  TLFLPDDYGFTEESAWATLISKFKCLRALDLHHSCIRQLPYTIGKLKHLRYLDLSDNGDF 613

Query: 518  TTVPNSITKLQSLETLILL-CSKITLLPGEIWKLQKLEHIYLHKDTVLTYMPSGLSHLTS 694
             ++P  I  L +L+TL+L  C+ +  LP ++ KL  L H+ +     LT++PS L  LTS
Sbjct: 614  KSLPCFICNLYNLQTLLLSNCTSLQCLPRDLGKLISLRHLMIDGCHRLTHLPSQLGKLTS 673

Query: 695  IRTLRDFFVGKGIGC-----KLNELNGLIHLKDFLGIFNLENV-SSARDCVEANLKGK 850
            ++ L  F +     C     KL +LNGL  L+D L I NL  V +   +   +NLKGK
Sbjct: 674  LQRLPRFIIALNKECFPGSAKLKDLNGLNQLRDELCIENLGEVKNDVFESKGSNLKGK 731


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  179 bits (455), Expect = 5e-43
 Identities = 116/295 (39%), Positives = 160/295 (54%), Gaps = 12/295 (4%)
 Frame = +2

Query: 2    YPKDWVISKQALILLWMAQGFVHTLGENQILEDIGNVYVKDLMWRSFFQEAELDFLGQIL 181
            +PKD    K+ L+LLWMA+GFVH  G  + LED+ + Y  DL+ RSFFQ+++ +    + 
Sbjct: 427  FPKDHEFDKEDLVLLWMAEGFVHPKGRRR-LEDVASDYFDDLLLRSFFQQSKTN----LS 481

Query: 182  NLKMHDLVHDLAQSVAGTEYFIAGKETEGDIPNGVRHLHCVEEDLPVEFRESLRKHTNLR 361
            N  MHDL+HDLA+SVAG   F    E   DIP  VRH     +       E+L     LR
Sbjct: 482  NFVMHDLIHDLAESVAGEICFRLEGEKLQDIPENVRHTSVSVDKCKSVIYEALHMKKGLR 541

Query: 362  TLLF----------NSKFLTEDILSSFKCLRVLRLL-VETGEVPSSIGKLKRLRYLRIES 508
            T+L           N K L  D++SS KCLR L +  +   ++P S+G L  +RYL +  
Sbjct: 542  TMLLLCSETSREVSNVKVL-HDLISSLKCLRSLDMSHIAIKDLPGSVGDLMHMRYLNLSY 600

Query: 509  DSVTTVPNSITKLQSLETLILL-CSKITLLPGEIWKLQKLEHIYLHKDTVLTYMPSGLSH 685
              +  +P+SI  L +L+TLIL+ C+K   LP     L  L H+ L     L  MP     
Sbjct: 601  TEIKELPDSICNLCNLQTLILVGCNKFLTLPKCTKDLVNLRHLNLTGCWHLKSMPPSFGK 660

Query: 686  LTSIRTLRDFFVGKGIGCKLNELNGLIHLKDFLGIFNLENVSSARDCVEANLKGK 850
            LTS++ L  F VGKG+ C LNEL  +  L+D L I  +E+V +  D  E +LK K
Sbjct: 661  LTSLQRLHRFVVGKGVECGLNELKNMNELRDTLCIDRVEDVLNIEDAKEVSLKSK 715


>ref|XP_003634908.1| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1280

 Score =  174 bits (441), Expect = 2e-41
 Identities = 122/302 (40%), Positives = 164/302 (54%), Gaps = 19/302 (6%)
 Frame = +2

Query: 2    YPKDWVISKQALILLWMAQGFVHTLGENQILEDIGNVYVKDLMWRSFFQEAELD---FLG 172
            +PKD+   K+ L+LLWMA+G +      + +ED GN+   +L+ RSFFQ+A  D   FL 
Sbjct: 446  FPKDYKFEKRNLVLLWMAEGLLGGSKREETIEDYGNMCFDNLLSRSFFQQASDDESIFL- 504

Query: 173  QILNLKMHDLVHDLAQSVAGTEYFIAGKETEGDIPNGVRHLHCVEED---LPVEFRESLR 343
                  MHDL+HDLAQ V+G        E +  I    RH   V  +   L  +F     
Sbjct: 505  ------MHDLIHDLAQFVSGKFCSSLDDEKKSQISKQTRHSSYVRAEQFELSKKFDPFYE 558

Query: 344  KHTNLRTLL-----------FNSKFLTEDILSSFKCLRVLRLL-VETGEVPSSIGKLKRL 487
             H NLRT L           F SK +++ +L + KCLRVL L      E+P SIG LK L
Sbjct: 559  AH-NLRTFLPVHTGHQYGRIFLSKKVSDLLLPTLKCLRVLSLAHYHIVELPHSIGTLKHL 617

Query: 488  RYLRIESDSVTTVPNSITKLQSLETLILL-CSKITLLPGEIWKLQKLEHIYLHKDTVLTY 664
            RYL +   S+  +P SIT L +L+TL+L  C  +T LP E+ KL  L+H+ +  +T+L  
Sbjct: 618  RYLDLSRTSIRRLPESITNLFNLQTLMLSNCISLTHLPTEMGKLINLQHLDI-TNTILKE 676

Query: 665  MPSGLSHLTSIRTLRDFFVGKGIGCKLNELNGLIHLKDFLGIFNLENVSSARDCVEANLK 844
            MP G+  L  +RTL  F VG+  G K+ EL  + HL   L I  L+NV  A D  EANLK
Sbjct: 677  MPMGMKGLKRLRTLTAFVVGEDRGAKIKELRDMSHLGGRLCISKLQNVVDAMDVFEANLK 736

Query: 845  GK 850
            GK
Sbjct: 737  GK 738


>emb|CAN83754.1| hypothetical protein VITISV_032967 [Vitis vinifera]
          Length = 1109

 Score =  173 bits (438), Expect = 5e-41
 Identities = 118/294 (40%), Positives = 169/294 (57%), Gaps = 11/294 (3%)
 Frame = +2

Query: 2    YPKDWVISKQALILLWMAQGFVHTLGENQILEDIGNVYVKDLMWRSFFQEAELDFLGQIL 181
            +PKD+ I K+ LI LWMAQ ++  L  N+ LED+G+ Y ++L+ RS FQE E D    IL
Sbjct: 370  FPKDYKIEKKILIQLWMAQNYIQPLDGNEHLEDVGDQYFEELLSRSLFQEIEKDDNNNIL 429

Query: 182  NLKMHDLVHDLAQSVAGTEYFIAGKETEGDIPNGVRHLHCVEEDLPVEFRESLRKHTNLR 361
            + KMHDL+HDLAQS+  +E FI   + + +I   + H+   +    ++    + K   ++
Sbjct: 430  SCKMHDLIHDLAQSLVKSEIFILTDDVK-NISKKMYHVSIFKWSPKIK----VLKANPVK 484

Query: 362  TLLFNSK---FLTEDILSSFKCLRVLRL--LVETGEVPSSIGKLKRLRYLRIESDSVTTV 526
            TL   SK      +  +++ KCLRVL L  L+   ++P S+GKL  LRYL +       +
Sbjct: 485  TLFMLSKGYFQYVDSTVNNCKCLRVLDLSWLINLKKLPMSLGKLVHLRYLDLSGGGFEVL 544

Query: 527  PNSITKLQSLETLILL-CSKITLLPGEIWKLQKLEHIYLHKDTVLTYMPSGLSHLTSIRT 703
            P+ IT LQ+L+TL L  C  +  LP  I K+  L H+ +   T L+YMP  L  LT ++T
Sbjct: 545  PSGITSLQNLQTLKLSECHSLKELPRNIRKMINLRHLEIDTCTRLSYMPCRLGELTMLQT 604

Query: 704  LRDFFVG----KGIGCKLNELNGLIHLKDFLGIFNLENV-SSARDCVEANLKGK 850
            L  F +G    KGIG +LNEL  L +L+  L I NLE V   A +  EANLK K
Sbjct: 605  LPLFIIGKGDRKGIG-RLNELKCLNNLRGGLRIRNLERVKGGALESKEANLKEK 657


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