BLASTX nr result

ID: Coptis25_contig00002482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002482
         (2985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527822.1| Squamous cell carcinoma antigen recognized b...   654   0.0  
ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen r...   632   e-178
emb|CBI29629.3| unnamed protein product [Vitis vinifera]              632   e-178
ref|XP_003539380.1| PREDICTED: squamous cell carcinoma antigen r...   618   e-174
ref|XP_003548657.1| PREDICTED: squamous cell carcinoma antigen r...   615   e-173

>ref|XP_002527822.1| Squamous cell carcinoma antigen recognized by T-cells, putative
            [Ricinus communis] gi|223532746|gb|EEF34525.1| Squamous
            cell carcinoma antigen recognized by T-cells, putative
            [Ricinus communis]
          Length = 852

 Score =  654 bits (1688), Expect = 0.0
 Identities = 324/547 (59%), Positives = 409/547 (74%), Gaps = 5/547 (0%)
 Frame = +3

Query: 1356 EDVENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHD 1535
            E ++++E  L+ NP++YD HVQYIK +RK+GE++KLR ARE+MS  FPL+P +W +WA D
Sbjct: 66   EQLKSLEAELSSNPSNYDAHVQYIKLLRKMGEIEKLREAREAMSASFPLTPIMWQEWAKD 125

Query: 1536 EAXXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLR 1706
            EA              V +LY+R + DYLSVPLWCDYLN+VQ+      + S    SK R
Sbjct: 126  EASLSTGPEGYS---VVEKLYERGVSDYLSVPLWCDYLNYVQECNLLVRECSSDGLSKAR 182

Query: 1707 DLFERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXX 1886
            +++ERAL  AGLHV +G K+W++Y +FEQ IL T+D  +T+ KE QV RIR++FHRQ   
Sbjct: 183  NIYERALTAAGLHVAEGNKLWDSYREFEQAILLTMDETDTKVKESQVQRIRNIFHRQLSV 242

Query: 1887 XXXXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-S 2063
                      AYK+WE E GN     ++  DGI  +V+S+YQKAMEMY+ RA +EE I  
Sbjct: 243  PLHNLRSTLLAYKAWEVEQGNVLDTESSYLDGISSHVASAYQKAMEMYNTRAQHEEQIYK 302

Query: 2064 GEITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVP 2243
             +I+  EK Q+FM YL FE+++GDPAR Q+LYERA+TEFPVSSD+WLDYT Y+D+T+KV 
Sbjct: 303  QDISEQEKFQNFMNYLNFEKTAGDPARVQVLYERAITEFPVSSDIWLDYTCYLDKTLKVG 362

Query: 2244 KIVLDIHARATRNCTWVGELWVRYLLALERARSSEELMSTVFEQSLQCV-SSSEEYLDLF 2420
             IV D + RATRNC+WVGELWVRYLL+LER+R+ E+ +STVFE+SLQC+ S++EEYLDLF
Sbjct: 363  NIVKDAYFRATRNCSWVGELWVRYLLSLERSRAHEKEISTVFEESLQCLFSTAEEYLDLF 422

Query: 2421 LTRIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELS 2600
            LTR+DGLRRRI      +  L YS+I++T Q A+DYLSP LKN +GLL LH YWARLEL+
Sbjct: 423  LTRVDGLRRRILFGSEAEGVLNYSLIKETMQHASDYLSPQLKNTEGLLRLHAYWARLELN 482

Query: 2601 FGKDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSE 2780
             GKDL A RGVWESLLK SGSM E W+ YI ME E GH+ EAR IYKRCYSK+FTGTGSE
Sbjct: 483  LGKDLVAARGVWESLLKISGSMLEVWQGYITMETELGHINEARSIYKRCYSKRFTGTGSE 542

Query: 2781 DICHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKA 2960
            DICHSW+RFEREFG L+D+DHAV+KVTPRLEEL+LYR QQESK+ VA   QKE+   +  
Sbjct: 543  DICHSWLRFEREFGALEDFDHAVQKVTPRLEELQLYRMQQESKAFVASADQKENPIKRNV 602

Query: 2961 PQKRKMG 2981
             +KRK G
Sbjct: 603  REKRKGG 609


>ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
            3-like [Vitis vinifera]
          Length = 838

 Score =  632 bits (1630), Expect = e-178
 Identities = 319/543 (58%), Positives = 401/543 (73%), Gaps = 5/543 (0%)
 Frame = +3

Query: 1362 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1541
            ++ +E  ++ +P+ YD HV+YIK +RK+GE++KLR ARE+MS L PL+P +W +WA DE 
Sbjct: 44   LQTLESEVSSDPSKYDAHVEYIKCLRKLGEIEKLREAREAMSALHPLTPLMWQEWARDEL 103

Query: 1542 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1712
                          + +LY++ + DYLSVPLWCDYLNFVQ+H     + S     K R+L
Sbjct: 104  TARPEAFLE-----IEKLYEKGVFDYLSVPLWCDYLNFVQEHDPAVRECSSEGILKARNL 158

Query: 1713 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1892
            FERAL  AGLHV +G KIWE Y +FEQ IL TID  + E KEKQV RIR++FHRQ     
Sbjct: 159  FERALTAAGLHVAEGSKIWEVYREFEQAILLTIDENDNEAKEKQVQRIRNIFHRQLSVPL 218

Query: 1893 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2069
                    A+K+WE E GN    +++S DGI  +V+S+Y+KAM+MY ARA  EE I   +
Sbjct: 219  ANMRSTLLAFKAWEVEQGNVLDVNSSSMDGISSHVASAYEKAMDMYDARAHLEEQIVRQD 278

Query: 2070 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2249
            I+ +E+ Q F+ YL FEQSSGDPAR QILYERA+TEFPVS DLWLDYT+Y+D+T+KV  +
Sbjct: 279  ISDSERHQQFLNYLNFEQSSGDPARVQILYERAITEFPVSRDLWLDYTQYLDKTLKVANV 338

Query: 2250 VLDIHARATRNCTWVGELWVRYLLALERARSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2426
            V D+++RA +NC WVGELWV+YLL+LERAR+SE  +STVF++SLQC  S   EYL+LFLT
Sbjct: 339  VRDVYSRAVKNCPWVGELWVQYLLSLERARASEREISTVFDKSLQCTFSRFGEYLNLFLT 398

Query: 2427 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2606
            R+DGLRRRI+L    ++ LEY++IRD FQ A+DYLSPHLK  D L+ LH YWARLEL+  
Sbjct: 399  RVDGLRRRISLPGQ-EEVLEYALIRDAFQYASDYLSPHLKCTDDLVRLHAYWARLELNLN 457

Query: 2607 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2786
            KDL A RGVWESLLK SGSMF AW+ YI ME+E GH+ EAR IYKRCYSK+F GTGSEDI
Sbjct: 458  KDLVAARGVWESLLKNSGSMFGAWQGYIAMELEAGHINEARSIYKRCYSKRFAGTGSEDI 517

Query: 2787 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKAPQ 2966
            CHSW+RFEREFGTL+D +HAVRKVTPRL EL+L++  QESKS  A   Q E+ H K A +
Sbjct: 518  CHSWLRFEREFGTLEDLEHAVRKVTPRLAELQLFK-LQESKSTAASTDQIENPHKKNARE 576

Query: 2967 KRK 2975
            KRK
Sbjct: 577  KRK 579


>emb|CBI29629.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  632 bits (1630), Expect = e-178
 Identities = 319/543 (58%), Positives = 401/543 (73%), Gaps = 5/543 (0%)
 Frame = +3

Query: 1362 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1541
            ++ +E  ++ +P+ YD HV+YIK +RK+GE++KLR ARE+MS L PL+P +W +WA DE 
Sbjct: 44   LQTLESEVSSDPSKYDAHVEYIKCLRKLGEIEKLREAREAMSALHPLTPLMWQEWARDEL 103

Query: 1542 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1712
                          + +LY++ + DYLSVPLWCDYLNFVQ+H     + S     K R+L
Sbjct: 104  TARPEAFLE-----IEKLYEKGVFDYLSVPLWCDYLNFVQEHDPAVRECSSEGILKARNL 158

Query: 1713 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1892
            FERAL  AGLHV +G KIWE Y +FEQ IL TID  + E KEKQV RIR++FHRQ     
Sbjct: 159  FERALTAAGLHVAEGSKIWEVYREFEQAILLTIDENDNEAKEKQVQRIRNIFHRQLSVPL 218

Query: 1893 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2069
                    A+K+WE E GN    +++S DGI  +V+S+Y+KAM+MY ARA  EE I   +
Sbjct: 219  ANMRSTLLAFKAWEVEQGNVLDVNSSSMDGISSHVASAYEKAMDMYDARAHLEEQIVRQD 278

Query: 2070 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2249
            I+ +E+ Q F+ YL FEQSSGDPAR QILYERA+TEFPVS DLWLDYT+Y+D+T+KV  +
Sbjct: 279  ISDSERHQQFLNYLNFEQSSGDPARVQILYERAITEFPVSRDLWLDYTQYLDKTLKVANV 338

Query: 2250 VLDIHARATRNCTWVGELWVRYLLALERARSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2426
            V D+++RA +NC WVGELWV+YLL+LERAR+SE  +STVF++SLQC  S   EYL+LFLT
Sbjct: 339  VRDVYSRAVKNCPWVGELWVQYLLSLERARASEREISTVFDKSLQCTFSRFGEYLNLFLT 398

Query: 2427 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2606
            R+DGLRRRI+L    ++ LEY++IRD FQ A+DYLSPHLK  D L+ LH YWARLEL+  
Sbjct: 399  RVDGLRRRISLPGQ-EEVLEYALIRDAFQYASDYLSPHLKCTDDLVRLHAYWARLELNLN 457

Query: 2607 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2786
            KDL A RGVWESLLK SGSMF AW+ YI ME+E GH+ EAR IYKRCYSK+F GTGSEDI
Sbjct: 458  KDLVAARGVWESLLKNSGSMFGAWQGYIAMELEAGHINEARSIYKRCYSKRFAGTGSEDI 517

Query: 2787 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKAPQ 2966
            CHSW+RFEREFGTL+D +HAVRKVTPRL EL+L++  QESKS  A   Q E+ H K A +
Sbjct: 518  CHSWLRFEREFGTLEDLEHAVRKVTPRLAELQLFK-LQESKSTAASTDQIENPHKKNARE 576

Query: 2967 KRK 2975
            KRK
Sbjct: 577  KRK 579


>ref|XP_003539380.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
            3-like [Glycine max]
          Length = 837

 Score =  618 bits (1593), Expect = e-174
 Identities = 309/547 (56%), Positives = 402/547 (73%), Gaps = 6/547 (1%)
 Frame = +3

Query: 1362 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1541
            +E+++  L  NP++YD H+QYI+ +R++G++DKL  ARE+MS+LFPLSP++W QW  DE 
Sbjct: 52   IESLQTELVTNPSNYDAHLQYIRLLRRMGDVDKLSRAREAMSELFPLSPTMWRQWIKDEL 111

Query: 1542 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1712
                          + +LY+R + DYLSV LWCDY+NFVQ+        SP   SK RDL
Sbjct: 112  SLNTAARPEAFSR-ILKLYERGVFDYLSVSLWCDYINFVQEFDPMVRQFSPTGISKARDL 170

Query: 1713 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1892
            FE AL  AGLHV +G KIWEAY K+EQ IL T D  + + KEKQV RIRSLFHRQ     
Sbjct: 171  FESALTAAGLHVAEGSKIWEAYKKYEQDILLTFDDTDEQAKEKQVQRIRSLFHRQLSVPL 230

Query: 1893 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2069
                    AYK+WE E G+     +     I P+V++SYQKA+EMY+AR   EE I S  
Sbjct: 231  AGMSSTITAYKTWEMEQGSLQDVESIDLVDIYPHVAASYQKALEMYNARFHLEEQILSPN 290

Query: 2070 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2249
            I+ +E+LQH+M YLKFEQSSG PAR Q+LYERA+T+FP++ DLWLD TR +D T+KV  I
Sbjct: 291  ISDSERLQHYMNYLKFEQSSGMPARIQVLYERAITDFPITPDLWLDCTRNLDNTLKVGNI 350

Query: 2250 VLDIHARATRNCTWVGELWVRYLLALERARSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2426
            V ++++RAT+NC WVGELWVRY+L+LER  +SE+ +S +FE+SL C  S+ +EYLDLFLT
Sbjct: 351  VSNVYSRATKNCPWVGELWVRYMLSLERGHASEKDLSEIFEKSLLCTFSTLDEYLDLFLT 410

Query: 2427 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2606
            R+DGLRRR  +A S+++ LEY +IR+TFQRA+DYLSP+LKN +GLL LH YWARLE   G
Sbjct: 411  RVDGLRRR--MASSSEEDLEYKIIRETFQRASDYLSPYLKNTEGLLHLHAYWARLETKLG 468

Query: 2607 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2786
            KD+ A RGVWE+ LK  GSM E+W  YI ME+E GH+ EAR IYKRCYSK+F+GTGSEDI
Sbjct: 469  KDITAARGVWENCLKLCGSMLESWTGYIAMEVELGHINEARSIYKRCYSKRFSGTGSEDI 528

Query: 2787 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKK-AP 2963
            C SW+RFEREFG L+D+DHA+ KVTPR++ELKL+R QQESKS     A++ + ++K+ A 
Sbjct: 529  CQSWLRFEREFGKLEDFDHALHKVTPRMDELKLFRMQQESKS-----AEESEKNTKRNAR 583

Query: 2964 QKRKMGA 2984
            +KRK+G+
Sbjct: 584  EKRKLGS 590


>ref|XP_003548657.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
            3-like [Glycine max]
          Length = 847

 Score =  615 bits (1586), Expect = e-173
 Identities = 307/546 (56%), Positives = 395/546 (72%), Gaps = 5/546 (0%)
 Frame = +3

Query: 1362 VENVEKALADNPTDYDTHVQYIKAVRKVGELDKLRAARESMSQLFPLSPSLWLQWAHDEA 1541
            +E+++  L  NP++YD H+QYI  +R++G++DKL  ARE+MS+LFPLSP++W QW  DE 
Sbjct: 62   LESLQTELVTNPSNYDAHLQYITLLRRMGDVDKLSRAREAMSELFPLSPAIWRQWIKDEL 121

Query: 1542 XXXXXXXXXXXXHAVTQLYDRALRDYLSVPLWCDYLNFVQDHRA---DSSPAATSKLRDL 1712
                          + +LY+R + DYLSV LWCDY+NFVQ+        SP   SK RDL
Sbjct: 122  SLNTATRPEAFSR-ILKLYERGVFDYLSVSLWCDYINFVQEFDPMVRQCSPTGISKARDL 180

Query: 1713 FERALPTAGLHVTQGYKIWEAYIKFEQTILQTIDHINTEEKEKQVHRIRSLFHRQXXXXX 1892
            FE AL  AGLHV +G KIWEAY K+EQ IL T D I+ + KEKQV  IRSLFHRQ     
Sbjct: 181  FESALTAAGLHVAEGSKIWEAYRKYEQAILLTFDDIDAQAKEKQVQSIRSLFHRQLSVPL 240

Query: 1893 XXXXXXXXAYKSWETELGNTPKGSANSFDGIPPNVSSSYQKAMEMYHARACYEEHI-SGE 2069
                    AYK+WE E G+     +     I P+V++SYQKA++MY+AR   EE I S  
Sbjct: 241  AGMSSTITAYKTWEVEQGSLQDVESIDLVDIYPHVAASYQKALDMYNARFHLEEQILSPN 300

Query: 2070 ITPAEKLQHFMIYLKFEQSSGDPARTQILYERAVTEFPVSSDLWLDYTRYVDQTIKVPKI 2249
            ++ +E+LQH+M YLKFEQSSG PAR Q+LYERA+T+FP++ DLWLDYT  +D T+KV  I
Sbjct: 301  VSDSERLQHYMNYLKFEQSSGTPARIQVLYERAITDFPITPDLWLDYTCNLDNTLKVGNI 360

Query: 2250 VLDIHARATRNCTWVGELWVRYLLALERARSSEELMSTVFEQSLQCVSSS-EEYLDLFLT 2426
            V ++++RAT+NC WVGELWVR +L+LER  +SE+ +S +FE+SLQC  S+ +EYLDLFLT
Sbjct: 361  VNNVYSRATKNCPWVGELWVRCMLSLERGHASEKDLSEIFEKSLQCTFSTLDEYLDLFLT 420

Query: 2427 RIDGLRRRINLADSTDDFLEYSVIRDTFQRATDYLSPHLKNADGLLLLHEYWARLELSFG 2606
            R+DGLRRR  +A S ++ LEY +IR+TFQRA+DYLSP+LKN +GLL LH YWARLE   G
Sbjct: 421  RVDGLRRR--MASSNEEDLEYKIIRETFQRASDYLSPYLKNTEGLLHLHAYWARLETKLG 478

Query: 2607 KDLAAVRGVWESLLKTSGSMFEAWKQYIKMEIETGHVTEARGIYKRCYSKKFTGTGSEDI 2786
            KD+ A RGVWE+ LK  GSM E+W  YI ME+E GH+ EAR IYKRCYSK+F+GTGSEDI
Sbjct: 479  KDITAARGVWENCLKICGSMLESWTGYIAMEVELGHINEARSIYKRCYSKRFSGTGSEDI 538

Query: 2787 CHSWVRFEREFGTLDDYDHAVRKVTPRLEELKLYRSQQESKSGVALVAQKEDLHSKKAPQ 2966
            C SW+RFEREFG L+D+DHA+ KVTPRLEELKL+R QQESK+      + E    + A +
Sbjct: 539  CQSWLRFEREFGKLEDFDHALHKVTPRLEELKLFRIQQESKT----AEESEKNPKRNARE 594

Query: 2967 KRKMGA 2984
            KRK+G+
Sbjct: 595  KRKLGS 600


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