BLASTX nr result

ID: Coptis25_contig00002477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002477
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514207.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002514207.1| conserved hypothetical protein [Ricinus communis]
           gi|223546663|gb|EEF48161.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/69 (43%), Positives = 39/69 (56%)
 Frame = +2

Query: 206 MKDSGKSGKVNGKYGQQDGRKDRRSAXXXXXXXXXXXXXXXFTWAGIGFSHVEIGMEKKY 385
           MK++GKS K +    + D R+DR+SA               FTWAG G+S  EIG +K  
Sbjct: 1   MKNTGKSSKSSTANSKSDARRDRKSATGMSGSPKKGGHGGKFTWAGDGYSPAEIGYQKD- 59

Query: 386 ILDKKDPNF 412
           +LD KDPNF
Sbjct: 60  VLDAKDPNF 68


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