BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002469
         (1441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...   416   e-114
emb|CBI40495.3| unnamed protein product [Vitis vinifera]              411   e-112
ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory pr...   411   e-112
emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]   401   e-109
ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory pr...   398   e-108

>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
            vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
            product [Vitis vinifera]
          Length = 327

 Score =  416 bits (1070), Expect = e-114
 Identities = 204/284 (71%), Positives = 233/284 (82%)
 Frame = -2

Query: 1344 GGNKYQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTELVQAIANSLFSLPSTEDQD 1165
            G  ++Q+D+G+L+AFDP HHF S P +RE L +ECL++GTELVQ+IA++LF+LPSTED D
Sbjct: 2    GTQEHQIDLGHLLAFDPLHHFPSPPSSREELVKECLQKGTELVQSIADTLFNLPSTEDID 61

Query: 1164 GPLVHLPPPVTRLPREKHLPRPKPPTKWEEFAQKKGIKNRKKDKVVYDEQTATWKRRHGY 985
            GPLV LPPP TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRHGY
Sbjct: 62   GPLVKLPPPTTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGY 121

Query: 984  DRVNDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXKNRLQNLKQAAKVGALPSHV 805
            DRVNDD D+PIIEAKMTDE G+DPFA              KNRLQNLKQAAKVGALPSH+
Sbjct: 122  DRVNDDEDIPIIEAKMTDEAGEDPFAKRRAEKKKRVEKQGKNRLQNLKQAAKVGALPSHI 181

Query: 804  QLAAKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXGKFDKKLPGEKPAKHPGKFRKF 625
            QLAA ALPITGTQ+A  K+SK ELEDV           GKFDKKLPGEKP KH GK+RKF
Sbjct: 182  QLAATALPITGTQTAPKKVSKNELEDVASMAATATASGGKFDKKLPGEKPEKHKGKYRKF 241

Query: 624  LPVAEGTGMGSQEKQQTDKVLNKLISMHSHEILNVDKAVTMFNV 493
            LPV EGTG+GS EKQQT+K+LNKLIS +SHEILNVDKA+ M+NV
Sbjct: 242  LPVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNV 285


>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  411 bits (1057), Expect = e-112
 Identities = 201/281 (71%), Positives = 231/281 (82%)
 Frame = -2

Query: 1335 KYQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTELVQAIANSLFSLPSTEDQDGPL 1156
            ++Q+D+G+LMAFDP HHF S P +RE L +ECL++GT LVQ IA++LF+LPSTED DGPL
Sbjct: 5    EHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDGPL 64

Query: 1155 VHLPPPVTRLPREKHLPRPKPPTKWEEFAQKKGIKNRKKDKVVYDEQTATWKRRHGYDRV 976
            V LPPP+TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRHGYDRV
Sbjct: 65   VKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRV 124

Query: 975  NDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXKNRLQNLKQAAKVGALPSHVQLA 796
            NDD+D+PIIEAKMTDEPG+DPF               KNRLQNLKQAAKVGALPSH+QLA
Sbjct: 125  NDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSHIQLA 184

Query: 795  AKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXGKFDKKLPGEKPAKHPGKFRKFLPV 616
            A ALPITGTQ+A  K SK EL+D+           GKFDKKL GEKP KH GK+RKFLPV
Sbjct: 185  ATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYRKFLPV 244

Query: 615  AEGTGMGSQEKQQTDKVLNKLISMHSHEILNVDKAVTMFNV 493
             EGTG+GSQEKQQT+KVLN+LIS +SHEILNVDKA+ M+NV
Sbjct: 245  VEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 285


>ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
            vinifera]
          Length = 331

 Score =  411 bits (1057), Expect = e-112
 Identities = 201/281 (71%), Positives = 231/281 (82%)
 Frame = -2

Query: 1335 KYQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTELVQAIANSLFSLPSTEDQDGPL 1156
            ++Q+D+G+LMAFDP HHF S P +RE L +ECL++GT LVQ IA++LF+LPSTED DGPL
Sbjct: 8    EHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDGPL 67

Query: 1155 VHLPPPVTRLPREKHLPRPKPPTKWEEFAQKKGIKNRKKDKVVYDEQTATWKRRHGYDRV 976
            V LPPP+TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRHGYDRV
Sbjct: 68   VKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRV 127

Query: 975  NDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXKNRLQNLKQAAKVGALPSHVQLA 796
            NDD+D+PIIEAKMTDEPG+DPF               KNRLQNLKQAAKVGALPSH+QLA
Sbjct: 128  NDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSHIQLA 187

Query: 795  AKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXGKFDKKLPGEKPAKHPGKFRKFLPV 616
            A ALPITGTQ+A  K SK EL+D+           GKFDKKL GEKP KH GK+RKFLPV
Sbjct: 188  ATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYRKFLPV 247

Query: 615  AEGTGMGSQEKQQTDKVLNKLISMHSHEILNVDKAVTMFNV 493
             EGTG+GSQEKQQT+KVLN+LIS +SHEILNVDKA+ M+NV
Sbjct: 248  VEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 288


>emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]
          Length = 327

 Score =  401 bits (1030), Expect = e-109
 Identities = 199/281 (70%), Positives = 229/281 (81%)
 Frame = -2

Query: 1335 KYQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTELVQAIANSLFSLPSTEDQDGPL 1156
            ++Q+D+G+LMAFDP HHF S P +RE L +ECL++GT LVQ IA++LF+LPSTED DGPL
Sbjct: 5    EHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDGPL 64

Query: 1155 VHLPPPVTRLPREKHLPRPKPPTKWEEFAQKKGIKNRKKDKVVYDEQTATWKRRHGYDRV 976
            V LPPP+TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRHGYDRV
Sbjct: 65   VKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRV 124

Query: 975  NDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXKNRLQNLKQAAKVGALPSHVQLA 796
            NDD+D+PIIEAKMTD  G+DPF               KNRLQNLKQAAKVGALPSH+QLA
Sbjct: 125  NDDKDJPIIEAKMTD-AGEDPFXKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSHIQLA 183

Query: 795  AKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXGKFDKKLPGEKPAKHPGKFRKFLPV 616
            A ALPITGTQ+A  K SK EL+D+           GKFDKKL GEKP KH GK+RKFLPV
Sbjct: 184  ATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYRKFLPV 243

Query: 615  AEGTGMGSQEKQQTDKVLNKLISMHSHEILNVDKAVTMFNV 493
             EGTG+GSQEKQQT+KVLN+LIS +SHEILNVDKA+ M+NV
Sbjct: 244  VEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 284


>ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis
            sativus] gi|449476004|ref|XP_004154612.1| PREDICTED:
            ribosome biogenesis regulatory protein homolog [Cucumis
            sativus]
          Length = 329

 Score =  398 bits (1023), Expect = e-108
 Identities = 196/280 (70%), Positives = 228/280 (81%)
 Frame = -2

Query: 1332 YQVDVGNLMAFDPHHHFTSLPPTREALAEECLRRGTELVQAIANSLFSLPSTEDQDGPLV 1153
            +Q+D+G+LMAF+PHH F SLP +RE L  ECL++GTELVQ+IAN LF+LPSTED+DGPLV
Sbjct: 9    FQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPSTEDRDGPLV 68

Query: 1152 HLPPPVTRLPREKHLPRPKPPTKWEEFAQKKGIKNRKKDKVVYDEQTATWKRRHGYDRVN 973
             LPPP TRLPREK LP+PKPPTKWE FAQKKGIKNRKKDK VYDEQT TWKRRHGYDR N
Sbjct: 69   RLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRRHGYDRAN 128

Query: 972  DDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXKNRLQNLKQAAKVGALPSHVQLAA 793
            D+ ++PIIEAKMTDE G+DPFA              KNRLQNLKQAAKVGALPSH+QLAA
Sbjct: 129  DEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALPSHIQLAA 188

Query: 792  KALPITGTQSASNKLSKAELEDVXXXXXXXXXXXGKFDKKLPGEKPAKHPGKFRKFLPVA 613
             ALPITGTQ+A  K++K EL +V           GKFDKK  GEKPAKH GK+RKFLPV 
Sbjct: 189  TALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYRKFLPVV 248

Query: 612  EGTGMGSQEKQQTDKVLNKLISMHSHEILNVDKAVTMFNV 493
            EGTG+GS+E++QT+KVL++LIS +SHEILNV+KAV M+NV
Sbjct: 249  EGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNV 288