BLASTX nr result

ID: Coptis25_contig00002462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002462
         (2621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCA...   268   6e-69
emb|CBI31637.3| unnamed protein product [Vitis vinifera]              268   6e-69
emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera]   268   7e-69
ref|XP_003538420.1| PREDICTED: putative DNA-binding protein ESCA...   229   3e-57
gb|ADY38789.1| DNA-binding protein [Coffea arabica]                   228   8e-57

>ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
            vinifera]
          Length = 327

 Score =  268 bits (685), Expect = 6e-69
 Identities = 135/201 (67%), Positives = 152/201 (75%)
 Frame = +3

Query: 1662 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 1841
            GSKNKPKPPI+IT+ESPNALRSHVLEISSG+DIAESIA FA+RR +GVS+LS +G+V NV
Sbjct: 118  GSKNKPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNV 177

Query: 1842 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 2021
            TLRQPA+PG V+TL GRFEILSLSGAFLPAPSPP ATGLTVY                  
Sbjct: 178  TLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALM 237

Query: 2022 XXXXXMVIAATFTNATYERLPVXXXXXXXXXXXXXXXXVNSGTIGVSAPQSHGLADPSSM 2201
                 +VIAATF+NAT+ERLP+                VNSGT G SAPQSHGL DPSSM
Sbjct: 238  ASGPVIVIAATFSNATFERLPLEDEPANEGIQMPQTSGVNSGTGGTSAPQSHGLVDPSSM 297

Query: 2202 PMYSLPPNLLPNGQMPHDVYW 2264
            P+Y+LPPNLLPNGQMPHDV+W
Sbjct: 298  PIYNLPPNLLPNGQMPHDVFW 318



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = +2

Query: 1262 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDDEHGSLGRLGPRREQELMD 1408
            M +RWW GNV M   DP+SS+PSLHLRN +D+ G L RLGPRREQE MD
Sbjct: 1    MTHRWWAGNVAMR--DPMSSAPSLHLRNTEDDQGGLNRLGPRREQEFMD 47


>emb|CBI31637.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  268 bits (685), Expect = 6e-69
 Identities = 135/201 (67%), Positives = 152/201 (75%)
 Frame = +3

Query: 1662 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 1841
            GSKNKPKPPI+IT+ESPNALRSHVLEISSG+DIAESIA FA+RR +GVS+LS +G+V NV
Sbjct: 91   GSKNKPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNV 150

Query: 1842 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 2021
            TLRQPA+PG V+TL GRFEILSLSGAFLPAPSPP ATGLTVY                  
Sbjct: 151  TLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALM 210

Query: 2022 XXXXXMVIAATFTNATYERLPVXXXXXXXXXXXXXXXXVNSGTIGVSAPQSHGLADPSSM 2201
                 +VIAATF+NAT+ERLP+                VNSGT G SAPQSHGL DPSSM
Sbjct: 211  ASGPVIVIAATFSNATFERLPLEDEPANEGIQMPQTSGVNSGTGGTSAPQSHGLVDPSSM 270

Query: 2202 PMYSLPPNLLPNGQMPHDVYW 2264
            P+Y+LPPNLLPNGQMPHDV+W
Sbjct: 271  PIYNLPPNLLPNGQMPHDVFW 291



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = +2

Query: 1262 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDDEHGSLGRLGPRREQELMD 1408
            M +RWW GNV M   DP+SS+PSLHLRN +D+ G L RLGPRREQE MD
Sbjct: 1    MTHRWWAGNVAMR--DPMSSAPSLHLRNTEDDQGGLNRLGPRREQEFMD 47


>emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera]
          Length = 293

 Score =  268 bits (684), Expect = 7e-69
 Identities = 134/201 (66%), Positives = 152/201 (75%)
 Frame = +3

Query: 1662 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 1841
            GSKNKPKPPI+IT+ESPNALRSHVLEISSG+DIAESIA FA+RR +GVS+LS +G+V NV
Sbjct: 84   GSKNKPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNV 143

Query: 1842 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 2021
            TLRQPA+PG V+TL GRFEILSLSGAFLPAPSPP ATGLTVY                  
Sbjct: 144  TLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALM 203

Query: 2022 XXXXXMVIAATFTNATYERLPVXXXXXXXXXXXXXXXXVNSGTIGVSAPQSHGLADPSSM 2201
                 +VIAATF+NAT+ERLP+                VNSGT G SAPQSHGL DPSSM
Sbjct: 204  ASGPVIVIAATFSNATFERLPLEDEPANEGIQMPQTSGVNSGTGGTSAPQSHGLVDPSSM 263

Query: 2202 PMYSLPPNLLPNGQMPHDVYW 2264
            P+Y++PPNLLPNGQMPHDV+W
Sbjct: 264  PIYNJPPNLLPNGQMPHDVFW 284


>ref|XP_003538420.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 289

 Score =  229 bits (584), Expect = 3e-57
 Identities = 123/202 (60%), Positives = 138/202 (68%), Gaps = 1/202 (0%)
 Frame = +3

Query: 1662 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 1841
            GSKNKPKPPI+IT+ESPNALRSHVLEI+SG+D+AESIA FA RR +GVS+LSG+G+V NV
Sbjct: 84   GSKNKPKPPIVITKESPNALRSHVLEITSGSDVAESIAAFANRRHRGVSVLSGSGIVANV 143

Query: 1842 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 2021
            TLRQPA+P  V+TLHGRFEILSLSGAFLP+PSPP ATGLTVY                  
Sbjct: 144  TLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPPGATGLTVYLAGGQGQVVGGTVAGSLV 203

Query: 2022 XXXXXMVIAATFTNATYERLPVXXXXXXXXXXXXXXXXVNSGTIGVSAPQSHGLADPSSM 2201
                 MVIAATF NATYERLP+                V          QS GL +  SM
Sbjct: 204  ASGPVMVIAATFANATYERLPL------EDEQGEEGMQVQQQQQQQQQQQSQGLGEQVSM 257

Query: 2202 PMYSLPPNLLPNGQ-MPHDVYW 2264
            PMY+LPPNLL NGQ MPHDV W
Sbjct: 258  PMYNLPPNLLHNGQNMPHDVLW 279


>gb|ADY38789.1| DNA-binding protein [Coffea arabica]
          Length = 289

 Score =  228 bits (580), Expect = 8e-57
 Identities = 117/202 (57%), Positives = 142/202 (70%), Gaps = 2/202 (0%)
 Frame = +3

Query: 1662 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 1841
            GSKNKPKPPI +TR+SPNALRSHV+E+++G+DIAESIA FARRRQ+GV +LS +G VTNV
Sbjct: 79   GSKNKPKPPIFVTRDSPNALRSHVMEVANGSDIAESIAQFARRRQRGVCVLSASGTVTNV 138

Query: 1842 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 2021
            TLRQP++PGAV+ LHGRFEILSL+GAFLP P+PP ATGLT+Y                  
Sbjct: 139  TLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIYLAGGQGQVVGGSVVGSLV 198

Query: 2022 XXXXXMVIAATFTNATYERLPVXXXXXXXXXXXXXXXXVNSGTIGV-SAPQSHGLADPSS 2198
                 MVIA+TF+NATYERLP+                  S  +G   APQ  GL DPSS
Sbjct: 199  ASGPVMVIASTFSNATYERLPIEEDEEGGGAAQGQLGGNGSPPLGSGGAPQQGGLGDPSS 258

Query: 2199 MPMYSLPPNLLPN-GQMPHDVY 2261
            MP+YSLPPNL+PN GQ+ H+ +
Sbjct: 259  MPVYSLPPNLMPNGGQLNHEAF 280


Top