BLASTX nr result

ID: Coptis25_contig00002451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002451
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92540.1| unknown [Populus trichocarpa]                           74   8e-11
ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244...    68   4e-09
emb|CBI23474.3| unnamed protein product [Vitis vinifera]               68   4e-09
ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267...    68   5e-09
emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]    67   9e-09

>gb|ABK92540.1| unknown [Populus trichocarpa]
          Length = 354

 Score = 73.9 bits (180), Expect = 8e-11
 Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 10/270 (3%)
 Frame = +3

Query: 153 SLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPPYLYVVVNFXXXXX 332
           SLK +LLS S +F++  L + VP+V +  V+  P+LW+++  W  PPYLYV++N      
Sbjct: 7   SLKVILLSTSVLFLSLCLKISVPLVHDFSVNQAPLLWSSILSWLKPPYLYVIINCIIITI 66

Query: 333 XXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEYKMELEAIEPEISGHXXXX 512
             SSRF       S   A + T +D + K    I        +M++  +E + S      
Sbjct: 67  AASSRFHH-----SHSSANSTTTHDQIEK----IPMDEYLHDEMKISTVEIQTS------ 111

Query: 513 XXXXXXXXXXXXXDXXXXXXXXXXXXAEFEAREPEMYYGYIXXXXXXXXXXXXXPMASKL 692
                                      +++ RE E                    +A   
Sbjct: 112 ----------------HFGGLESRAEIDYQDREEEREEAAHHEQVVIEDKGIVNAVA--- 152

Query: 693 EFEVNKMEGEDEYASSMSRGM-PMNRMDTVE---------IPMDSIHQQDSFAHQAINNE 842
             E +K E  D++  S S  + P  R+D+ E          P++       F H+     
Sbjct: 153 VLEDSKNETVDDFVLSKSTWVPPFKRIDSSENNLLLPDNLSPVEKPLVSSRFGHRKFVKA 212

Query: 843 SPKAGKEQRSLETEANDTMEDTWKMIMESR 932
           SP+ G+  R  + + ++T+E+TWK I E R
Sbjct: 213 SPEGGRALRVAKPKRHETLENTWKTITEGR 242


>ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera]
          Length = 330

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 39/115 (33%), Positives = 59/115 (51%)
 Frame = +3

Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293
           MA VS +    + SLK  L+S+  + MA IL   +PV+ E  VSGVP++W++   W  PP
Sbjct: 1   MAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVMWSSFRSWLKPP 60

Query: 294 YLYVVVNFXXXXXXXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEY 458
           YLYV++N        SS+F  ++    +     K   D   +  F  + KN  E+
Sbjct: 61  YLYVIINGIIITIAASSKF-HRMNHQDRPETAAKDPED--ERTEFTYEMKNPPEF 112


>emb|CBI23474.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 39/115 (33%), Positives = 59/115 (51%)
 Frame = +3

Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293
           MA VS +    + SLK  L+S+  + MA IL   +PV+ E  VSGVP++W++   W  PP
Sbjct: 1   MAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVMWSSFRSWLKPP 60

Query: 294 YLYVVVNFXXXXXXXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEY 458
           YLYV++N        SS+F  ++    +     K   D   +  F  + KN  E+
Sbjct: 61  YLYVIINGIIITIAASSKF-HRMNHQDRPETAAKDPED--ERTEFTYEMKNPPEF 112


>ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera]
          Length = 320

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +3

Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293
           MA +S +  +   SLK +L+S   + MA  L + VPVV E  VS VP +W+ +  W  PP
Sbjct: 1   MAILSTDSTNWGLSLKVLLISTGVVSMAVALKISVPVVVEFAVSEVPSIWSFVLSWLRPP 60

Query: 294 YLYVVVNFXXXXXXXSSRFQQKIE 365
           YLY+V+NF       SS+ Q K+E
Sbjct: 61  YLYLVINFIIIIIVASSKLQHKVE 84


>emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]
          Length = 407

 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 39/115 (33%), Positives = 58/115 (50%)
 Frame = +3

Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293
           MA VS +    + SLK  L+S+  + MA IL   +PV+ E  VSGVP+ W++   W  PP
Sbjct: 78  MAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVXWSSFRSWLKPP 137

Query: 294 YLYVVVNFXXXXXXXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEY 458
           YLYV++N        SS+F  ++    +     K   D   +  F  + KN  E+
Sbjct: 138 YLYVIINGIIITIAASSKF-HRMNHQDRPETAAKDPED--ERTEFTYEMKNPPEF 189


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