BLASTX nr result
ID: Coptis25_contig00002451
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002451 (1224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK92540.1| unknown [Populus trichocarpa] 74 8e-11 ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244... 68 4e-09 emb|CBI23474.3| unnamed protein product [Vitis vinifera] 68 4e-09 ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267... 68 5e-09 emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera] 67 9e-09 >gb|ABK92540.1| unknown [Populus trichocarpa] Length = 354 Score = 73.9 bits (180), Expect = 8e-11 Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 10/270 (3%) Frame = +3 Query: 153 SLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPPYLYVVVNFXXXXX 332 SLK +LLS S +F++ L + VP+V + V+ P+LW+++ W PPYLYV++N Sbjct: 7 SLKVILLSTSVLFLSLCLKISVPLVHDFSVNQAPLLWSSILSWLKPPYLYVIINCIIITI 66 Query: 333 XXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEYKMELEAIEPEISGHXXXX 512 SSRF S A + T +D + K I +M++ +E + S Sbjct: 67 AASSRFHH-----SHSSANSTTTHDQIEK----IPMDEYLHDEMKISTVEIQTS------ 111 Query: 513 XXXXXXXXXXXXXDXXXXXXXXXXXXAEFEAREPEMYYGYIXXXXXXXXXXXXXPMASKL 692 +++ RE E +A Sbjct: 112 ----------------HFGGLESRAEIDYQDREEEREEAAHHEQVVIEDKGIVNAVA--- 152 Query: 693 EFEVNKMEGEDEYASSMSRGM-PMNRMDTVE---------IPMDSIHQQDSFAHQAINNE 842 E +K E D++ S S + P R+D+ E P++ F H+ Sbjct: 153 VLEDSKNETVDDFVLSKSTWVPPFKRIDSSENNLLLPDNLSPVEKPLVSSRFGHRKFVKA 212 Query: 843 SPKAGKEQRSLETEANDTMEDTWKMIMESR 932 SP+ G+ R + + ++T+E+TWK I E R Sbjct: 213 SPEGGRALRVAKPKRHETLENTWKTITEGR 242 >ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera] Length = 330 Score = 68.2 bits (165), Expect = 4e-09 Identities = 39/115 (33%), Positives = 59/115 (51%) Frame = +3 Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293 MA VS + + SLK L+S+ + MA IL +PV+ E VSGVP++W++ W PP Sbjct: 1 MAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVMWSSFRSWLKPP 60 Query: 294 YLYVVVNFXXXXXXXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEY 458 YLYV++N SS+F ++ + K D + F + KN E+ Sbjct: 61 YLYVIINGIIITIAASSKF-HRMNHQDRPETAAKDPED--ERTEFTYEMKNPPEF 112 >emb|CBI23474.3| unnamed protein product [Vitis vinifera] Length = 304 Score = 68.2 bits (165), Expect = 4e-09 Identities = 39/115 (33%), Positives = 59/115 (51%) Frame = +3 Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293 MA VS + + SLK L+S+ + MA IL +PV+ E VSGVP++W++ W PP Sbjct: 1 MAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVMWSSFRSWLKPP 60 Query: 294 YLYVVVNFXXXXXXXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEY 458 YLYV++N SS+F ++ + K D + F + KN E+ Sbjct: 61 YLYVIINGIIITIAASSKF-HRMNHQDRPETAAKDPED--ERTEFTYEMKNPPEF 112 >ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera] Length = 320 Score = 67.8 bits (164), Expect = 5e-09 Identities = 35/84 (41%), Positives = 49/84 (58%) Frame = +3 Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293 MA +S + + SLK +L+S + MA L + VPVV E VS VP +W+ + W PP Sbjct: 1 MAILSTDSTNWGLSLKVLLISTGVVSMAVALKISVPVVVEFAVSEVPSIWSFVLSWLRPP 60 Query: 294 YLYVVVNFXXXXXXXSSRFQQKIE 365 YLY+V+NF SS+ Q K+E Sbjct: 61 YLYLVINFIIIIIVASSKLQHKVE 84 >emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera] Length = 407 Score = 67.0 bits (162), Expect = 9e-09 Identities = 39/115 (33%), Positives = 58/115 (50%) Frame = +3 Query: 114 MATVSNNPIHTIFSLKNVLLSLSTMFMAFILYLYVPVVFEIVVSGVPMLWTTLGLWFTPP 293 MA VS + + SLK L+S+ + MA IL +PV+ E VSGVP+ W++ W PP Sbjct: 78 MAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVXWSSFRSWLKPP 137 Query: 294 YLYVVVNFXXXXXXXSSRFQQKIEGVSKVVATTKTQNDLLRKASFEIDTKNSFEY 458 YLYV++N SS+F ++ + K D + F + KN E+ Sbjct: 138 YLYVIINGIIITIAASSKF-HRMNHQDRPETAAKDPED--ERTEFTYEMKNPPEF 189