BLASTX nr result

ID: Coptis25_contig00002441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002441
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41008.1| unknown [Lotus japonicus]                              398   e-108
ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycin...   397   e-108
ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-li...   397   e-108
ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [V...   396   e-108
ref|XP_002511724.1| proteasome subunit beta type, putative [Rici...   395   e-108

>gb|AFK41008.1| unknown [Lotus japonicus]
          Length = 223

 Score =  398 bits (1022), Expect = e-108
 Identities = 191/222 (86%), Positives = 212/222 (95%)
 Frame = -2

Query: 959 SKQQANWSPYDNNGGTCVAIAGSNYCVIAADTRLSTGYSILTRDYSKLQQLADKSILASS 780
           +KQ ANWSPYDNNGG+CVAIAG++YCVIAADTR+STGY+ILTR+YSK+ QLA+KS++ASS
Sbjct: 2   TKQHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKISQLAEKSVMASS 61

Query: 779 GFQADIKALQKHLSAKHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN 600
           GFQAD+KALQK LSA+HLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYY+FNVLGGLD+
Sbjct: 62  GFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDS 121

Query: 599 EGKGCVFTYDAVGSYERVGYSSQGSGSTLITPVLDNQLKSPSPLLIPPRDAVTPLSETEA 420
           EGKGCVFTYDAVGSYERVGYSSQGSGSTLI P LDNQLKSPSPLL+P +DAVTPLSETEA
Sbjct: 122 EGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSETEA 181

Query: 419 VDLVKDVFASAAERDIYTGDRVEITIVNAAGIRREYAELRKD 294
           VDLVK VFASA ERDIYTGD++EI I+NA+GIRREY ELRKD
Sbjct: 182 VDLVKTVFASATERDIYTGDKLEIVILNASGIRREYMELRKD 223


>ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
           gi|255627685|gb|ACU14187.1| unknown [Glycine max]
          Length = 223

 Score =  397 bits (1021), Expect = e-108
 Identities = 190/222 (85%), Positives = 211/222 (95%)
 Frame = -2

Query: 959 SKQQANWSPYDNNGGTCVAIAGSNYCVIAADTRLSTGYSILTRDYSKLQQLADKSILASS 780
           +KQQANWSPYDNNGG+CVAIAG++YCVIAADTR+STGY+ILTRDYSK+ +LA+K ++ASS
Sbjct: 2   TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISRLAEKCVMASS 61

Query: 779 GFQADIKALQKHLSAKHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN 600
           GFQAD+KALQK LSA+HLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN
Sbjct: 62  GFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN 121

Query: 599 EGKGCVFTYDAVGSYERVGYSSQGSGSTLITPVLDNQLKSPSPLLIPPRDAVTPLSETEA 420
           EGKGCVFTYDAVGSYERVGYSSQGSGSTLI P LDNQLKSPSPLL+P +DAVTPLSE EA
Sbjct: 122 EGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181

Query: 419 VDLVKDVFASAAERDIYTGDRVEITIVNAAGIRREYAELRKD 294
           VDLVK VFASA ERDIYTGD+VEI ++NA+GIRREY +L+KD
Sbjct: 182 VDLVKTVFASATERDIYTGDKVEIVVLNASGIRREYMDLKKD 223


>ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
          Length = 223

 Score =  397 bits (1019), Expect = e-108
 Identities = 191/222 (86%), Positives = 209/222 (94%)
 Frame = -2

Query: 959 SKQQANWSPYDNNGGTCVAIAGSNYCVIAADTRLSTGYSILTRDYSKLQQLADKSILASS 780
           +KQ ANWSPYDNNGG+CVAIAG++YCVIAADTR+STGY+ILTRDYSK+ QLA+K ++ASS
Sbjct: 2   TKQHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASS 61

Query: 779 GFQADIKALQKHLSAKHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN 600
           GFQAD+KALQK LSA+HLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN
Sbjct: 62  GFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN 121

Query: 599 EGKGCVFTYDAVGSYERVGYSSQGSGSTLITPVLDNQLKSPSPLLIPPRDAVTPLSETEA 420
           EGKGCVFTYDAVGSYERVGYSSQGSGSTLI P LDNQLKSPSPLL+P +DAVTPLSE EA
Sbjct: 122 EGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181

Query: 419 VDLVKDVFASAAERDIYTGDRVEITIVNAAGIRREYAELRKD 294
           VDLVK VFASA ERDIYTGD+VEI I+NA+GI REY +LRKD
Sbjct: 182 VDLVKTVFASATERDIYTGDKVEIVILNASGIHREYMDLRKD 223


>ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
           gi|296089152|emb|CBI38855.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score =  396 bits (1018), Expect = e-108
 Identities = 189/222 (85%), Positives = 211/222 (95%)
 Frame = -2

Query: 959 SKQQANWSPYDNNGGTCVAIAGSNYCVIAADTRLSTGYSILTRDYSKLQQLADKSILASS 780
           +KQQANWSPYDNNGG+CVAIAG++YCVIAADTR+STGY+ILTRDYSK+ +LADK ++ASS
Sbjct: 2   TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMASS 61

Query: 779 GFQADIKALQKHLSAKHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN 600
           GFQAD++ALQKHL+A+HLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYY+FNVLGGLDN
Sbjct: 62  GFQADVRALQKHLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDN 121

Query: 599 EGKGCVFTYDAVGSYERVGYSSQGSGSTLITPVLDNQLKSPSPLLIPPRDAVTPLSETEA 420
           EGKGCVFTYDAVGSYE+VGYSSQGSGSTLI P LDNQLKSPSPLL+P  DAVTPLSE EA
Sbjct: 122 EGKGCVFTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPALDAVTPLSEPEA 181

Query: 419 VDLVKDVFASAAERDIYTGDRVEITIVNAAGIRREYAELRKD 294
           VDLVK VFASA ERDIYTGD++EI I+NA+GIRREY +LRKD
Sbjct: 182 VDLVKTVFASATERDIYTGDKLEIVILNASGIRREYMDLRKD 223


>ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
           gi|223548904|gb|EEF50393.1| proteasome subunit beta
           type, putative [Ricinus communis]
          Length = 223

 Score =  395 bits (1016), Expect = e-108
 Identities = 189/222 (85%), Positives = 210/222 (94%)
 Frame = -2

Query: 959 SKQQANWSPYDNNGGTCVAIAGSNYCVIAADTRLSTGYSILTRDYSKLQQLADKSILASS 780
           +KQQANWSPYDNNGG+CVAIAG++YCVIAADTR+STGY+ILTRDYSK+ QLA+KS++ASS
Sbjct: 2   TKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQLAEKSVMASS 61

Query: 779 GFQADIKALQKHLSAKHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDN 600
           GFQAD++ALQKHL AKHLIYQHQHNKQMSCPAM QLLSNTLY+KRFFPYYAFNVLGGLD+
Sbjct: 62  GFQADVQALQKHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGLDS 121

Query: 599 EGKGCVFTYDAVGSYERVGYSSQGSGSTLITPVLDNQLKSPSPLLIPPRDAVTPLSETEA 420
           EGKGCV+TYDAVGSYERVGYS+QGSGSTLI P LDNQLKSPSPLL+P +DAVTPLSE EA
Sbjct: 122 EGKGCVYTYDAVGSYERVGYSAQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEPEA 181

Query: 419 VDLVKDVFASAAERDIYTGDRVEITIVNAAGIRREYAELRKD 294
           VDLVK VFASA ERDIYTGD+VEI ++NA GIRREY ELRKD
Sbjct: 182 VDLVKTVFASATERDIYTGDKVEIVVLNADGIRREYMELRKD 223


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