BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002439
         (2707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533696.1| basic helix-loop-helix-containing protein, p...   316   2e-83
ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]...   269   3e-69
ref|XP_002265772.2| PREDICTED: xylulose kinase-like [Vitis vinif...   268   7e-69
emb|CBI38013.3| unnamed protein product [Vitis vinifera]              268   7e-69
emb|CAN73654.1| hypothetical protein VITISV_005731 [Vitis vinifera]   268   7e-69

>ref|XP_002533696.1| basic helix-loop-helix-containing protein, putative [Ricinus
            communis] gi|223526407|gb|EEF28691.1| basic
            helix-loop-helix-containing protein, putative [Ricinus
            communis]
          Length = 740

 Score =  316 bits (810), Expect = 2e-83
 Identities = 227/636 (35%), Positives = 317/636 (49%), Gaps = 22/636 (3%)
 Frame = -3

Query: 2408 MEITPLRHLLRSLCNDSPWEYAVFWKLKHRSRMLLNWEDGYCNYSKPRDFVESMSDILHN 2229
            M  T LR LL+SLC++S W YAV WKL+H S M+L WEDGY NYSK R+ V ++SD ++ 
Sbjct: 1    MGATALRQLLKSLCSNSTWNYAVLWKLRHGSPMILTWEDGYFNYSKSRELVGTISDDVYG 60

Query: 2228 IETNGLTSFDCENDVSDGISAGYPVGLAVASMSCLLYSLGEGFVGRAASTGKDCWIYADE 2049
               + L S   E + S GIS  YPVGL VA MS L Y  GEG VG+ A+    CW+    
Sbjct: 61   KGASDLISPQVETNTSRGISEEYPVGLVVADMSHLQYIFGEGVVGKVAALRDHCWVSFHH 120

Query: 2048 F---ESKLFPECPEDLQLQIAVGIKTVLHVPVIPHGVVQLGSLLQVTEDRTTVARIKDMF 1878
                +S+L PECPE+  LQ A GIKT+L VPV+P+GV+QLGSL +V ED + VA IK  F
Sbjct: 121  IFTGKSELIPECPEEWLLQFASGIKTILLVPVLPYGVLQLGSLEEVAEDVSIVAYIKYRF 180

Query: 1877 NTFQC---NSGPTMLSTPSRDXXXXXXXXXXXXXXXXXXXXXSFDVLNSIHSEMREAKDQ 1707
            N  Q    N+GP  L   S+                        ++L S+ +E  +    
Sbjct: 181  NCLQSVGENTGPCSLKKESQ----AQLSSSLISSSNKCLNVPLTNILTSVKTE--DVYQS 234

Query: 1706 IALDGVEITQNELAKYNTDVKFQFIGQDYLQVQSNNIDSIMAFGFGDLTMDTTAVSYNQN 1527
            IA + VE+  + LA  +  V+     QD        +   + F   +          N +
Sbjct: 235  IASNIVELGNDNLATASY-VQRLVTFQDVFTPTGEGLPEAIIFNRDNKINVPLVEVSNPS 293

Query: 1526 QLWNESHLDMMGLDAPDLAGLEENLRVFS-----HCNFNEHGFSALT---NMGMNISPYY 1371
               N+S L+MM     DL+ L E ++  S     + ++N +    L    N  MNI P  
Sbjct: 294  VSINDSQLEMMESKLFDLSCLMEEIQAHSEELQRYSDYNGYNMGLLEESFNEIMNIHPAG 353

Query: 1370 EMVDHQFEVESGQVTDQKSLHGFLNFPTECELHKALGPSLQQSCNDYLW-----IPNGSG 1206
             M       +     D K +  FL FP + ELHKAL P+  +  ++  W     + N  G
Sbjct: 354  SMTGEPCGDKYAIDLDNKIVSSFLRFPKDSELHKALEPASSKQTSEQFWDSSFMVENTCG 413

Query: 1205 -DDVRSSSICNTDFTGRREPSAGVSKGDADNLLDAMVSYMCDASGDIAXXXXXXXXXXXX 1029
               +  S   NT  + R EPS     GDA  LL+A+V+  C +S D              
Sbjct: 414  TSSLPPSKDPNT--SDRTEPSWFARGGDAGYLLEAVVANACHSSDDTICYEFKSLESSTS 471

Query: 1028 XSGQIAAXXXXXXXXXXXXQLGENDSGPWSSVRTGFVSRQGKDLTKCPSKSSLKRSRANL 849
              G  +              L ++ S P + + +  ++          S S    S  N 
Sbjct: 472  PRGSAS---PSPKNQYKGSDLAKDSSIPRNHLTSACITED----RNADSTSDTLMSMMNT 524

Query: 848  IAEEQEMGFGC--ILSRKDTKPCHIGQKKARNSDVQKPRPRDRQLIQDRVKELRELVPNG 675
            I  ++  G G      RK+ +  +  +++AR SD Q+ RPRDRQLIQ+RVKELRELVPNG
Sbjct: 525  ILSQEHKGGGTGNTQLRKERRTLNSSKRRARPSDNQRQRPRDRQLIQERVKELRELVPNG 584

Query: 674  GKCSIDSLLDQTIKHMLFLRSVTNRAETLKQCVYTD 567
             KCSID LLD+TIKHM++LRSVT++AE L+ C++ +
Sbjct: 585  AKCSIDGLLDRTIKHMMYLRSVTDQAEKLRHCLHQE 620


>ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]
           gi|223547984|gb|EEF49476.1| xylulose kinase, putative
           [Ricinus communis]
          Length = 435

 Score =  269 bits (687), Expect = 3e-69
 Identities = 123/167 (73%), Positives = 151/167 (90%)
 Frame = -3

Query: 503 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 324
           +VGYDPE++SYP W ++QP+S +LPSV AP +S+G +KED+R+Q+GFP++CV+CTGTTDS
Sbjct: 181 KVGYDPELDSYPPWLLAQPFSQILPSVTAPGSSIGCLKEDIRIQYGFPEDCVVCTGTTDS 240

Query: 323 ITAFLAACATQPGKAVTSLGSTLAVKLLSTRRVDDSRYEVYSHRLDDRWLVGGASNTGGA 144
           I AFLAA ATQPGKAVTSLGSTLA+KLLST R++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 241 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 300

Query: 143 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPP 3
           VLRQ+FTD+QL KLS+QIDP ++SP DYYPL AVGERFPVADP + P
Sbjct: 301 VLRQLFTDEQLEKLSEQIDPLKASPLDYYPLKAVGERFPVADPNLSP 347


>ref|XP_002265772.2| PREDICTED: xylulose kinase-like [Vitis vinifera]
          Length = 447

 Score =  268 bits (684), Expect = 7e-69
 Identities = 127/167 (76%), Positives = 148/167 (88%)
 Frame = -3

Query: 503 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 324
           +VGYDPE +SYP W +SQPYS +LPSV AP  S+G ++ED+R QFGFPK+CV+CTGTTDS
Sbjct: 188 KVGYDPEHDSYPSWLLSQPYSRVLPSVKAPGASIGYLQEDIRTQFGFPKDCVVCTGTTDS 247

Query: 323 ITAFLAACATQPGKAVTSLGSTLAVKLLSTRRVDDSRYEVYSHRLDDRWLVGGASNTGGA 144
           I AFLAA ATQPGKAVTSLGSTLA+KLLST R++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 248 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 307

Query: 143 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPP 3
           VLRQIFTD+QL KLS+QI+P  +SP DYYPL AVGERFPVADP+M P
Sbjct: 308 VLRQIFTDEQLEKLSEQINPMEASPLDYYPLHAVGERFPVADPKMVP 354


>emb|CBI38013.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  268 bits (684), Expect = 7e-69
 Identities = 127/167 (76%), Positives = 148/167 (88%)
 Frame = -3

Query: 503 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 324
           +VGYDPE +SYP W +SQPYS +LPSV AP  S+G ++ED+R QFGFPK+CV+CTGTTDS
Sbjct: 259 KVGYDPEHDSYPSWLLSQPYSRVLPSVKAPGASIGYLQEDIRTQFGFPKDCVVCTGTTDS 318

Query: 323 ITAFLAACATQPGKAVTSLGSTLAVKLLSTRRVDDSRYEVYSHRLDDRWLVGGASNTGGA 144
           I AFLAA ATQPGKAVTSLGSTLA+KLLST R++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 319 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 378

Query: 143 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPP 3
           VLRQIFTD+QL KLS+QI+P  +SP DYYPL AVGERFPVADP+M P
Sbjct: 379 VLRQIFTDEQLEKLSEQINPMEASPLDYYPLHAVGERFPVADPKMVP 425


>emb|CAN73654.1| hypothetical protein VITISV_005731 [Vitis vinifera]
          Length = 386

 Score =  268 bits (684), Expect = 7e-69
 Identities = 127/167 (76%), Positives = 148/167 (88%)
 Frame = -3

Query: 503 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 324
           +VGYDPE +SYP W +SQPYS +LPSV AP  S+G ++ED+R QFGFPK+CV+CTGTTDS
Sbjct: 127 KVGYDPEHDSYPSWLLSQPYSRVLPSVKAPGASIGYLQEDIRTQFGFPKDCVVCTGTTDS 186

Query: 323 ITAFLAACATQPGKAVTSLGSTLAVKLLSTRRVDDSRYEVYSHRLDDRWLVGGASNTGGA 144
           I AFLAA ATQPGKAVTSLGSTLA+KLLST R++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 187 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 246

Query: 143 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPP 3
           VLRQIFTD+QL KLS+QI+P  +SP DYYPL AVGERFPVADP+M P
Sbjct: 247 VLRQIFTDEQLEKLSEQINPMEASPLDYYPLHAVGERFPVADPKMVP 293