BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002418
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228...    57   1e-11
ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-conta...    57   1e-11
ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis...    59   3e-11
ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing...    59   9e-11
ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|2...    55   9e-11

>ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228515 [Cucumis sativus]
          Length = 291

 Score = 56.6 bits (135), Expect(2) = 1e-11
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = -2

Query: 173 DNAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFV 60
           +NAPVTR F+IASAL TI  G++G S KLGLSYQD+ V
Sbjct: 9   NNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIV 46



 Score = 37.7 bits (86), Expect(2) = 1e-11
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -1

Query: 66  LRLWRLFASVFAFSLTPEWMFG 1
           LRLW+L  SVFAFS TPE MFG
Sbjct: 48  LRLWKLVMSVFAFSSTPELMFG 69


>ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-containing protein 2-like
           [Cucumis sativus]
          Length = 291

 Score = 56.6 bits (135), Expect(2) = 1e-11
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = -2

Query: 173 DNAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFV 60
           +NAPVTR F+IASAL TI  G++G S KLGLSYQD+ V
Sbjct: 9   NNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIV 46



 Score = 37.7 bits (86), Expect(2) = 1e-11
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -1

Query: 66  LRLWRLFASVFAFSLTPEWMFG 1
           LRLW+L  SVFAFS TPE MFG
Sbjct: 48  LRLWKLVMSVFAFSSTPELMFG 69


>ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]
           gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis
           thaliana] gi|21553945|gb|AAM63026.1| unknown
           [Arabidopsis thaliana] gi|28950711|gb|AAO63279.1|
           At3g56740 [Arabidopsis thaliana]
           gi|110735889|dbj|BAE99920.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646039|gb|AEE79560.1|
           Ubiquitin-associated (UBA) protein [Arabidopsis
           thaliana]
          Length = 293

 Score = 58.5 bits (140), Expect(2) = 3e-11
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -2

Query: 170 NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIF 63
           NAPVT+AFVI SAL T+  G++G SSKLGLSYQDIF
Sbjct: 10  NAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIF 45



 Score = 34.3 bits (77), Expect(2) = 3e-11
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 63  RLWRLFASVFAFSLTPEWMFG 1
           R+W+L  S FAFS TPE MFG
Sbjct: 49  RIWKLIMSTFAFSSTPELMFG 69


>ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297322218|gb|EFH52639.1|
           ubiquitin-associated /TS-N domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 58.5 bits (140), Expect(2) = 9e-11
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -2

Query: 170 NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIF 63
           NAPVT+AFVI SAL T+  G++G SSKLGLSYQDIF
Sbjct: 10  NAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIF 45



 Score = 32.7 bits (73), Expect(2) = 9e-11
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 63  RLWRLFASVFAFSLTPEWMFG 1
           R+W+L  S F FS TPE MFG
Sbjct: 49  RIWKLIMSTFVFSSTPELMFG 69


>ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|222853957|gb|EEE91504.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 54.7 bits (130), Expect(2) = 9e-11
 Identities = 24/37 (64%), Positives = 32/37 (86%)
 Frame = -2

Query: 173 DNAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIF 63
           +NAPVTR  VIASA+ ++ +G++G S+KLGLSYQDIF
Sbjct: 9   NNAPVTRICVIASAIFSVFLGIKGGSNKLGLSYQDIF 45



 Score = 36.6 bits (83), Expect(2) = 9e-11
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -1

Query: 63  RLWRLFASVFAFSLTPEWMFG 1
           RLW+L  SVFAFS TPE MFG
Sbjct: 49  RLWKLVLSVFAFSSTPEMMFG 69