BLASTX nr result
ID: Coptis25_contig00002418
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002418 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228... 57 1e-11 ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-conta... 57 1e-11 ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis... 59 3e-11 ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing... 59 9e-11 ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|2... 55 9e-11 >ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228515 [Cucumis sativus] Length = 291 Score = 56.6 bits (135), Expect(2) = 1e-11 Identities = 26/38 (68%), Positives = 31/38 (81%) Frame = -2 Query: 173 DNAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFV 60 +NAPVTR F+IASAL TI G++G S KLGLSYQD+ V Sbjct: 9 NNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIV 46 Score = 37.7 bits (86), Expect(2) = 1e-11 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = -1 Query: 66 LRLWRLFASVFAFSLTPEWMFG 1 LRLW+L SVFAFS TPE MFG Sbjct: 48 LRLWKLVMSVFAFSSTPELMFG 69 >ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-containing protein 2-like [Cucumis sativus] Length = 291 Score = 56.6 bits (135), Expect(2) = 1e-11 Identities = 26/38 (68%), Positives = 31/38 (81%) Frame = -2 Query: 173 DNAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIFV 60 +NAPVTR F+IASAL TI G++G S KLGLSYQD+ V Sbjct: 9 NNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIV 46 Score = 37.7 bits (86), Expect(2) = 1e-11 Identities = 17/22 (77%), Positives = 18/22 (81%) Frame = -1 Query: 66 LRLWRLFASVFAFSLTPEWMFG 1 LRLW+L SVFAFS TPE MFG Sbjct: 48 LRLWKLVMSVFAFSSTPELMFG 69 >ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana] gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis thaliana] gi|21553945|gb|AAM63026.1| unknown [Arabidopsis thaliana] gi|28950711|gb|AAO63279.1| At3g56740 [Arabidopsis thaliana] gi|110735889|dbj|BAE99920.1| hypothetical protein [Arabidopsis thaliana] gi|332646039|gb|AEE79560.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana] Length = 293 Score = 58.5 bits (140), Expect(2) = 3e-11 Identities = 27/36 (75%), Positives = 31/36 (86%) Frame = -2 Query: 170 NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIF 63 NAPVT+AFVI SAL T+ G++G SSKLGLSYQDIF Sbjct: 10 NAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIF 45 Score = 34.3 bits (77), Expect(2) = 3e-11 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -1 Query: 63 RLWRLFASVFAFSLTPEWMFG 1 R+W+L S FAFS TPE MFG Sbjct: 49 RIWKLIMSTFAFSSTPELMFG 69 >ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297322218|gb|EFH52639.1| ubiquitin-associated /TS-N domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 293 Score = 58.5 bits (140), Expect(2) = 9e-11 Identities = 27/36 (75%), Positives = 31/36 (86%) Frame = -2 Query: 170 NAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIF 63 NAPVT+AFVI SAL T+ G++G SSKLGLSYQDIF Sbjct: 10 NAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIF 45 Score = 32.7 bits (73), Expect(2) = 9e-11 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -1 Query: 63 RLWRLFASVFAFSLTPEWMFG 1 R+W+L S F FS TPE MFG Sbjct: 49 RIWKLIMSTFVFSSTPELMFG 69 >ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|222853957|gb|EEE91504.1| predicted protein [Populus trichocarpa] Length = 290 Score = 54.7 bits (130), Expect(2) = 9e-11 Identities = 24/37 (64%), Positives = 32/37 (86%) Frame = -2 Query: 173 DNAPVTRAFVIASALLTILIGVRGSSSKLGLSYQDIF 63 +NAPVTR VIASA+ ++ +G++G S+KLGLSYQDIF Sbjct: 9 NNAPVTRICVIASAIFSVFLGIKGGSNKLGLSYQDIF 45 Score = 36.6 bits (83), Expect(2) = 9e-11 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -1 Query: 63 RLWRLFASVFAFSLTPEWMFG 1 RLW+L SVFAFS TPE MFG Sbjct: 49 RLWKLVLSVFAFSSTPEMMFG 69