BLASTX nr result

ID: Coptis25_contig00002409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002409
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ58595.1| unknown protein [Vitis vinifera]                      217   4e-54
ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago ...   216   5e-54
ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|2...   211   2e-52
ref|XP_002528501.1| conserved hypothetical protein [Ricinus comm...   208   2e-51
emb|CAQ58602.1| unknown gene [Vitis vinifera]                         204   2e-50

>emb|CAQ58595.1| unknown protein [Vitis vinifera]
          Length = 220

 Score =  217 bits (552), Expect = 4e-54
 Identities = 114/189 (60%), Positives = 139/189 (73%)
 Frame = -3

Query: 784 SLYGVLERIFRAILSPEDDEKATSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGSA 605
           +LY VL R+  AI  P D   + SL  R+K S   N+PL+ +AS+N+ RN++ WTR+GSA
Sbjct: 24  TLYHVLHRLMAAIFFP-DPTSSASLLRRVKISVADNVPLLRQASKNTARNVMHWTRRGSA 82

Query: 604 LRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXAGGCLAIFFTCMTAI 425
           LRALL IS+GTI LLAL+GLLVFM+FF+AAT N            AGG LA+FF C+TAI
Sbjct: 83  LRALLAISVGTITLLALTGLLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFFACITAI 142

Query: 424 YIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGSALSA 245
           YIGALSVAV VIS+ATI+ I AVLI TGWIGFFWTVW+ TKK    AKHSL MTGSA++A
Sbjct: 143 YIGALSVAVVVISTATISAIIAVLITTGWIGFFWTVWLVTKKSAGFAKHSLGMTGSAIAA 202

Query: 244 YSASRQTRQ 218
           YS+ R  R+
Sbjct: 203 YSSVRHVRR 211


>ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago truncatula]
           gi|355518802|gb|AET00426.1| hypothetical protein
           MTR_5g091900 [Medicago truncatula]
           gi|388503112|gb|AFK39622.1| unknown [Medicago
           truncatula]
          Length = 232

 Score =  216 bits (551), Expect = 5e-54
 Identities = 118/226 (52%), Positives = 155/226 (68%), Gaps = 3/226 (1%)
 Frame = -3

Query: 889 MSEQTNTNTEE---DKEVEKNQHLLQIEGQSTNKDVEESLYGVLERIFRAILSPEDDEKA 719
           M+E +N+N      + E E+ +    ++ ++T K V+++L  VL R+   IL P D    
Sbjct: 1   MAENSNSNGNSVHVEHEEEEEEETNNLKHRNT-KPVKQTLPEVLNRLASTILFP-DPADG 58

Query: 718 TSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGSALRALLVISIGTIVLLALSGLLV 539
           TSL  RIK S   N PLIPEASRNS  ++L+WTR+GS LRALLVIS+GT+  ++LSGLLV
Sbjct: 59  TSLLRRIKNSVADNAPLIPEASRNSANDVLVWTRRGSPLRALLVISVGTVAFVSLSGLLV 118

Query: 538 FMVFFVAATVNXXXXXXXXXXXXAGGCLAIFFTCMTAIYIGALSVAVFVISSATITTIFA 359
           FM+FF+ ATVN            AGG LAIFF C T+IYIGALS+A+FVIS  T  TI A
Sbjct: 119 FMLFFLTATVNAIVISLLISLAAAGGFLAIFFACATSIYIGALSIAIFVISVTTFWTIVA 178

Query: 358 VLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGSALSAYSASRQTR 221
           +LI +GWIGFF+TVW+ T+K    AKHSLS+TG+A++ YS SR +R
Sbjct: 179 ILITSGWIGFFYTVWLITRKSFGFAKHSLSVTGAAITTYSTSRASR 224


>ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|222848860|gb|EEE86407.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  211 bits (537), Expect = 2e-52
 Identities = 114/194 (58%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
 Frame = -3

Query: 796 DVEESLYGVLERIFRAILSPEDDEKA--TSLFVRIKKSFYQNLPLIPEASRNSTRNLLIW 623
           D E  LY V+ R+   IL P+    A  TSL  RIK    +NLPL+ E SRNS + LL W
Sbjct: 23  DQEIDLYTVIHRVIVMILYPDPGSSASSTSLLQRIKIVLSENLPLLGEGSRNSGKKLLQW 82

Query: 622 TRQGSALRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXAGGCLAIFF 443
           T++GS LRALLVIS+GTI LL+L+G+LVFM+FF+AAT N            AGG LA+FF
Sbjct: 83  TQRGSPLRALLVISVGTIALLSLTGVLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFF 142

Query: 442 TCMTAIYIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMT 263
             + AIYIGALSVAVFVIS+ATI+   AVLI TGWIGFFWTVW+ TKK + +AKHSL++T
Sbjct: 143 AFLAAIYIGALSVAVFVISTATISATVAVLIVTGWIGFFWTVWLVTKKSIGVAKHSLTVT 202

Query: 262 GSALSAYSASRQTR 221
           GSA+SAYS+SR  +
Sbjct: 203 GSAISAYSSSRHAK 216


>ref|XP_002528501.1| conserved hypothetical protein [Ricinus communis]
           gi|223532061|gb|EEF33870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  208 bits (529), Expect = 2e-51
 Identities = 112/198 (56%), Positives = 143/198 (72%), Gaps = 2/198 (1%)
 Frame = -3

Query: 790 EESLYGVLERIFRAILSPEDDEKATSLFV--RIKKSFYQNLPLIPEASRNSTRNLLIWTR 617
           E +LY VL R+   I  P+    A SL V  RIK    +N PL+ +ASR++ R ++IWTR
Sbjct: 28  ELTLYSVLHRMASMIFVPDSRSDAASLPVMQRIKACVSENGPLLKDASRDTGRKIVIWTR 87

Query: 616 QGSALRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXAGGCLAIFFTC 437
           +GS LRALLVIS+G+I  + L+GLLVFM+FF+AATVN            AGG LA+FF C
Sbjct: 88  RGSPLRALLVISLGSITFVTLTGLLVFMLFFLAATVNAIVVSLLISLAAAGGFLALFFAC 147

Query: 436 MTAIYIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGS 257
           +TA+YIGALS+AVFVIS+ATI+ I AVLIATGWIGF  TVW+ TKK +++AKHSL+MTGS
Sbjct: 148 VTAVYIGALSIAVFVISTATISAIIAVLIATGWIGFLCTVWLVTKKSLAVAKHSLNMTGS 207

Query: 256 ALSAYSASRQTRQDEPGK 203
           A+SAYS++R     E  K
Sbjct: 208 AISAYSSARHRHYHEVDK 225


>emb|CAQ58602.1| unknown gene [Vitis vinifera]
          Length = 217

 Score =  204 bits (520), Expect = 2e-50
 Identities = 110/189 (58%), Positives = 135/189 (71%)
 Frame = -3

Query: 784 SLYGVLERIFRAILSPEDDEKATSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGSA 605
           +LY VL R+  AI  P D   +  L  R+K S   N+PL+ +AS+N+ RN++ WTR+G  
Sbjct: 24  TLYHVLHRLMAAIFFP-DPTSSAPLLRRVKISVADNVPLLRQASKNTARNVVHWTRRG-- 80

Query: 604 LRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXAGGCLAIFFTCMTAI 425
            RALLVIS+GTI LLAL+GLLVFM+FF+AAT N            AGG LA+FF C+TAI
Sbjct: 81  -RALLVISVGTITLLALTGLLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFFACITAI 139

Query: 424 YIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGSALSA 245
           YIGALSVAV VIS+ATI+ I A LI TGWIGFFWTVW+ TKK    AKHSL MTGSA++A
Sbjct: 140 YIGALSVAVVVISTATISAIIAALITTGWIGFFWTVWLVTKKSAGFAKHSLGMTGSAIAA 199

Query: 244 YSASRQTRQ 218
           YS+ R  R+
Sbjct: 200 YSSVRHVRR 208


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