BLASTX nr result

ID: Coptis25_contig00002404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002404
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95546.1| unknown [Populus trichocarpa]                          235   2e-59
ref|XP_002512714.1| conserved hypothetical protein [Ricinus comm...   229   9e-58
ref|XP_002269057.2| PREDICTED: uncharacterized protein LOC100260...   226   7e-57
ref|NP_001237895.1| uncharacterized protein LOC100306634 [Glycin...   223   5e-56
gb|AFK47476.1| unknown [Lotus japonicus]                              223   6e-56

>gb|ABK95546.1| unknown [Populus trichocarpa]
          Length = 223

 Score =  235 bits (599), Expect = 2e-59
 Identities = 117/148 (79%), Positives = 129/148 (87%), Gaps = 8/148 (5%)
 Frame = +3

Query: 276 GVLPNSNSSTNYVVPLDNS------SCITRPLAEILRDLNKRVPDNIIKP--DANFCIPW 431
           GV      ++NYVVPLDNS      SCITRPL+EILRDLNKR+PDNIIKP   ++  IPW
Sbjct: 73  GVKKKGVPNSNYVVPLDNSLASAYTSCITRPLSEILRDLNKRIPDNIIKPPNSSSTLIPW 132

Query: 432 YHANRMLSFYAPGWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIE 611
           +HANRMLSFYAPGWCGEIRDVIF+ENGSVTVVYRVTIRGSDGEAHRES+GTVSSSD+ IE
Sbjct: 133 FHANRMLSFYAPGWCGEIRDVIFAENGSVTVVYRVTIRGSDGEAHRESSGTVSSSDVAIE 192

Query: 612 DPVSAAEEIAFSRACARFGLGLYLYHED 695
           DPV+AAEEIAF RACARFGLGLYLYHE+
Sbjct: 193 DPVAAAEEIAFCRACARFGLGLYLYHEE 220


>ref|XP_002512714.1| conserved hypothetical protein [Ricinus communis]
           gi|223548675|gb|EEF50166.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  229 bits (584), Expect = 9e-58
 Identities = 117/144 (81%), Positives = 124/144 (86%), Gaps = 6/144 (4%)
 Frame = +3

Query: 282 LPNSNSSTNYVVPLDNS------SCITRPLAEILRDLNKRVPDNIIKPDANFCIPWYHAN 443
           +PNSN    YVVPLD S      SCITRPLAEILRDLNKR+PDNII P   F IPWYHAN
Sbjct: 82  VPNSN----YVVPLDKSFSSSYSSCITRPLAEILRDLNKRIPDNIITPSNTF-IPWYHAN 136

Query: 444 RMLSFYAPGWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPVS 623
           RMLSFYAPGWCGEIRDVIFS+NGSVTVVYRVTIRGSDGEA+RESTGTVS SD HI DPV+
Sbjct: 137 RMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTIRGSDGEAYRESTGTVSPSDGHIVDPVA 196

Query: 624 AAEEIAFSRACARFGLGLYLYHED 695
           AAEEIAF +ACARFGLGLYLYHE+
Sbjct: 197 AAEEIAFCKACARFGLGLYLYHEE 220


>ref|XP_002269057.2| PREDICTED: uncharacterized protein LOC100260946 [Vitis vinifera]
          Length = 209

 Score =  226 bits (576), Expect = 7e-57
 Identities = 112/139 (80%), Positives = 124/139 (89%), Gaps = 1/139 (0%)
 Frame = +3

Query: 282 LPNSNSSTNYVVPLD-NSSCITRPLAEILRDLNKRVPDNIIKPDANFCIPWYHANRMLSF 458
           +PNSN    YVVPLD +SSCITRPL EILRDLNKR+PDNI+K + +  IPWYHANRMLSF
Sbjct: 76  VPNSN----YVVPLDMSSSCITRPLVEILRDLNKRIPDNIVKHEDSLPIPWYHANRMLSF 131

Query: 459 YAPGWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPVSAAEEI 638
           YAPGWCGEIRDVIFS+NGSVTVVYRVT+RGSDGEAHRESTGTV  +D H+ DPV+AAEEI
Sbjct: 132 YAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVLPTDGHV-DPVAAAEEI 190

Query: 639 AFSRACARFGLGLYLYHED 695
           AF RACARFGLGLYLYHE+
Sbjct: 191 AFCRACARFGLGLYLYHEE 209


>ref|NP_001237895.1| uncharacterized protein LOC100306634 [Glycine max]
           gi|255629135|gb|ACU14912.1| unknown [Glycine max]
          Length = 202

 Score =  223 bits (569), Expect = 5e-56
 Identities = 110/136 (80%), Positives = 122/136 (89%), Gaps = 3/136 (2%)
 Frame = +3

Query: 297 SSTNYVVPLDN---SSCITRPLAEILRDLNKRVPDNIIKPDANFCIPWYHANRMLSFYAP 467
           S++NYVVPLDN   SSCITRPLAEILRDLNKR+PD I+K D    IPW+HANRMLSFYAP
Sbjct: 64  SNSNYVVPLDNMANSSCITRPLAEILRDLNKRIPDTIVKHDR--FIPWHHANRMLSFYAP 121

Query: 468 GWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPVSAAEEIAFS 647
           GWCGEIRDVIFS+NGSVTVVYR+T+RGSDGEA+RESTGT+S SD  I DPVSAAEEIAF 
Sbjct: 122 GWCGEIRDVIFSDNGSVTVVYRLTVRGSDGEAYRESTGTISPSDGSIGDPVSAAEEIAFC 181

Query: 648 RACARFGLGLYLYHED 695
           ++CARFGLGLYLYHED
Sbjct: 182 KSCARFGLGLYLYHED 197


>gb|AFK47476.1| unknown [Lotus japonicus]
          Length = 220

 Score =  223 bits (568), Expect = 6e-56
 Identities = 110/145 (75%), Positives = 123/145 (84%), Gaps = 12/145 (8%)
 Frame = +3

Query: 297 SSTNYVVPLDNS------SCITRPLAEILRDLNKRVPDNIIK------PDANFCIPWYHA 440
           S++NYVVPLDNS      SCITRPLAEILRDLNKR+PD I+K      P A+  IPWYHA
Sbjct: 71  SNSNYVVPLDNSFPFSNSSCITRPLAEILRDLNKRIPDTIVKAHVPDDPSASTFIPWYHA 130

Query: 441 NRMLSFYAPGWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPV 620
           NRMLSFYAPGWCGEIRDVIFS+NGSVTVVYR+T+RGSDGEA+RESTGT+S +D    DPV
Sbjct: 131 NRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRLTVRGSDGEAYRESTGTISPNDGSTVDPV 190

Query: 621 SAAEEIAFSRACARFGLGLYLYHED 695
           SAAEE+AF +ACARFGLGLYLYHED
Sbjct: 191 SAAEEVAFCKACARFGLGLYLYHED 215


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