BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002401
         (3214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Sela...   120   2e-24
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]      119   7e-24
emb|CBI17535.3| unnamed protein product [Vitis vinifera]              118   9e-24
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   118   9e-24
ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei...   117   2e-23

>ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
            gi|300151088|gb|EFJ17735.1| hypothetical protein
            SELMODRAFT_154282 [Selaginella moellendorffii]
          Length = 246

 Score =  120 bits (302), Expect = 2e-24
 Identities = 59/85 (69%), Positives = 65/85 (76%)
 Frame = -3

Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161
            VR+V DK +NKPRGYAFIEY HTRDMK+AYKQ DGRK+++RRVLVDVERGRTVPNW    
Sbjct: 37   VRLVHDKDSNKPRGYAFIEYFHTRDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWRPRR 96

Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQ 1086
                       GDEVN KYSGREPQ
Sbjct: 97   LGGGLGSTRVGGDEVNQKYSGREPQ 121


>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score =  119 bits (297), Expect = 7e-24
 Identities = 59/91 (64%), Positives = 69/91 (75%)
 Frame = -3

Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161
            VR+VTDKSTNKPRGYAFIEY HTRDMK+AYKQ DG+K+++RRVLVDVERGRTVPNW    
Sbjct: 184  VRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRR 243

Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQQLTSGG 1068
                       G+E+N +YSGRE  Q+  GG
Sbjct: 244  LGGGLGTTRVGGEELNQRYSGRE--QVQPGG 272


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  118 bits (296), Expect = 9e-24
 Identities = 58/85 (68%), Positives = 65/85 (76%)
 Frame = -3

Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161
            VR++TDK T+KPRGYAFIEY HTRDMK+AYKQ DGRKL++RRVLVDVERGRTVPNW    
Sbjct: 167  VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRR 226

Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQ 1086
                       G+EVN KYSGRE Q
Sbjct: 227  LGGGLGTTRVGGEEVNPKYSGREQQ 251


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
            vinifera]
          Length = 514

 Score =  118 bits (296), Expect = 9e-24
 Identities = 58/85 (68%), Positives = 65/85 (76%)
 Frame = -3

Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161
            VR++TDK T+KPRGYAFIEY HTRDMK+AYKQ DGRKL++RRVLVDVERGRTVPNW    
Sbjct: 167  VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRR 226

Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQ 1086
                       G+EVN KYSGRE Q
Sbjct: 227  LGGGLGTTRVGGEEVNPKYSGREQQ 251



 Score = 62.0 bits (149), Expect = 1e-06
 Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
 Frame = -3

Query: 704 YDRVESKXXXXXXXXXXXXXDNM--ELDHG------HGYDLPEPEHD-----LYEPRGEG 564
           YD +ESK             ++   E DHG      HG+  PE EHD      Y+ +  G
Sbjct: 387 YDHMESKHERERHGERDRDLEHAGPEDDHGWYEQPEHGHRRPEAEHDDEHYKHYDHQARG 446

Query: 563 QYSHLEPQTDHERYD-HDSXXXXXXXXXXXXXXXXXXDISEPREREKIRDQGWDYRHSER 387
           QY HL+ Q DH+ YD H                       + RER++ RD   +YR SER
Sbjct: 447 QYDHLDAQGDHDLYDRHADNDRDRYNQMDEDNYHYDHAAYDSRERDRTRDLEREYRRSER 506

Query: 386 SVSREIEH 363
           S+SR+ EH
Sbjct: 507 SLSRDFEH 514


>ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
            max]
          Length = 481

 Score =  117 bits (293), Expect = 2e-23
 Identities = 58/89 (65%), Positives = 65/89 (73%)
 Frame = -3

Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161
            VR+V DK TNKPRGYAFIEY HTRDMK+AYKQ DGRK++ RRVLVDVERGRTVPNW    
Sbjct: 170  VRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRR 229

Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQQLTS 1074
                       G+EVN ++SGRE QQ  S
Sbjct: 230  LGGGLGTTRVGGEEVNQRHSGREQQQSRS 258