BLASTX nr result
ID: Coptis25_contig00002401
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002401 (3214 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Sela... 120 2e-24 gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora] 119 7e-24 emb|CBI17535.3| unnamed protein product [Vitis vinifera] 118 9e-24 ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei... 118 9e-24 ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotei... 117 2e-23 >ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii] gi|300151088|gb|EFJ17735.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii] Length = 246 Score = 120 bits (302), Expect = 2e-24 Identities = 59/85 (69%), Positives = 65/85 (76%) Frame = -3 Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161 VR+V DK +NKPRGYAFIEY HTRDMK+AYKQ DGRK+++RRVLVDVERGRTVPNW Sbjct: 37 VRLVHDKDSNKPRGYAFIEYFHTRDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWRPRR 96 Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQ 1086 GDEVN KYSGREPQ Sbjct: 97 LGGGLGSTRVGGDEVNQKYSGREPQ 121 >gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora] Length = 532 Score = 119 bits (297), Expect = 7e-24 Identities = 59/91 (64%), Positives = 69/91 (75%) Frame = -3 Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161 VR+VTDKSTNKPRGYAFIEY HTRDMK+AYKQ DG+K+++RRVLVDVERGRTVPNW Sbjct: 184 VRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRR 243 Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQQLTSGG 1068 G+E+N +YSGRE Q+ GG Sbjct: 244 LGGGLGTTRVGGEELNQRYSGRE--QVQPGG 272 >emb|CBI17535.3| unnamed protein product [Vitis vinifera] Length = 504 Score = 118 bits (296), Expect = 9e-24 Identities = 58/85 (68%), Positives = 65/85 (76%) Frame = -3 Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161 VR++TDK T+KPRGYAFIEY HTRDMK+AYKQ DGRKL++RRVLVDVERGRTVPNW Sbjct: 167 VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRR 226 Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQ 1086 G+EVN KYSGRE Q Sbjct: 227 LGGGLGTTRVGGEEVNPKYSGREQQ 251 >ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis vinifera] Length = 514 Score = 118 bits (296), Expect = 9e-24 Identities = 58/85 (68%), Positives = 65/85 (76%) Frame = -3 Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161 VR++TDK T+KPRGYAFIEY HTRDMK+AYKQ DGRKL++RRVLVDVERGRTVPNW Sbjct: 167 VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRR 226 Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQ 1086 G+EVN KYSGRE Q Sbjct: 227 LGGGLGTTRVGGEEVNPKYSGREQQ 251 Score = 62.0 bits (149), Expect = 1e-06 Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 14/128 (10%) Frame = -3 Query: 704 YDRVESKXXXXXXXXXXXXXDNM--ELDHG------HGYDLPEPEHD-----LYEPRGEG 564 YD +ESK ++ E DHG HG+ PE EHD Y+ + G Sbjct: 387 YDHMESKHERERHGERDRDLEHAGPEDDHGWYEQPEHGHRRPEAEHDDEHYKHYDHQARG 446 Query: 563 QYSHLEPQTDHERYD-HDSXXXXXXXXXXXXXXXXXXDISEPREREKIRDQGWDYRHSER 387 QY HL+ Q DH+ YD H + RER++ RD +YR SER Sbjct: 447 QYDHLDAQGDHDLYDRHADNDRDRYNQMDEDNYHYDHAAYDSRERDRTRDLEREYRRSER 506 Query: 386 SVSREIEH 363 S+SR+ EH Sbjct: 507 SLSRDFEH 514 >ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine max] Length = 481 Score = 117 bits (293), Expect = 2e-23 Identities = 58/89 (65%), Positives = 65/89 (73%) Frame = -3 Query: 1340 VRMVTDKSTNKPRGYAFIEYAHTRDMKSAYKQGDGRKLNDRRVLVDVERGRTVPNWXXXX 1161 VR+V DK TNKPRGYAFIEY HTRDMK+AYKQ DGRK++ RRVLVDVERGRTVPNW Sbjct: 170 VRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRR 229 Query: 1160 XXXXXXXXXXXGDEVNMKYSGREPQQLTS 1074 G+EVN ++SGRE QQ S Sbjct: 230 LGGGLGTTRVGGEEVNQRHSGREQQQSRS 258