BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002398
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatul...   108   4e-41
ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vi...   109   7e-41
emb|CBI25428.3| unnamed protein product [Vitis vinifera]              109   7e-41
gb|AEO35024.1| hypothetical protein [Amblyomma maculatum]             108   9e-41
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   108   9e-41

>ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
           gi|355505623|gb|AES86765.1| 40S ribosomal protein S4
           [Medicago truncatula]
          Length = 264

 Score =  108 bits (270), Expect(2) = 4e-41
 Identities = 51/54 (94%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   DVVSIPKTNENFRLLYDTKGRFRLHSVKDEEAKFKLCKVRSVQLGQKGIPYLNT 162
           DVVSIPKTNENFRLLYDTKGRFRLHSV+D+EAKFKLCKVRSVQ GQKGIPYLNT
Sbjct: 88  DVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNT 141



 Score = 84.7 bits (208), Expect(2) = 4e-41
 Identities = 41/59 (69%), Positives = 45/59 (76%)
 Frame = +2

Query: 263 DPLIRANDTIKLDLENNKIVDFIKFDVGNVIMXXXXXXXXXXXXIKSREKHKGTFETTY 439
           DPLI+ANDTIKLDLENNKI DFIKFDVGNV+M            IK+REKHKGTFET +
Sbjct: 151 DPLIKANDTIKLDLENNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIH 209


>ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
          Length = 264

 Score =  109 bits (273), Expect(2) = 7e-41
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   DVVSIPKTNENFRLLYDTKGRFRLHSVKDEEAKFKLCKVRSVQLGQKGIPYLNT 162
           DVVSIPKTNENFRLLYDTKGRFRLHSV+DEEAKFKLCKVRSVQ GQKGIPYLNT
Sbjct: 88  DVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNT 141



 Score = 82.8 bits (203), Expect(2) = 7e-41
 Identities = 40/59 (67%), Positives = 45/59 (76%)
 Frame = +2

Query: 263 DPLIRANDTIKLDLENNKIVDFIKFDVGNVIMXXXXXXXXXXXXIKSREKHKGTFETTY 439
           DPLI+ANDTIKLDLE+NKI DFIKFDVGNV+M            IK+REKHKGTFET +
Sbjct: 151 DPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIH 209


>emb|CBI25428.3| unnamed protein product [Vitis vinifera]
          Length = 246

 Score =  109 bits (273), Expect(2) = 7e-41
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   DVVSIPKTNENFRLLYDTKGRFRLHSVKDEEAKFKLCKVRSVQLGQKGIPYLNT 162
           DVVSIPKTNENFRLLYDTKGRFRLHSV+DEEAKFKLCKVRSVQ GQKGIPYLNT
Sbjct: 70  DVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNT 123



 Score = 82.8 bits (203), Expect(2) = 7e-41
 Identities = 40/59 (67%), Positives = 45/59 (76%)
 Frame = +2

Query: 263 DPLIRANDTIKLDLENNKIVDFIKFDVGNVIMXXXXXXXXXXXXIKSREKHKGTFETTY 439
           DPLI+ANDTIKLDLE+NKI DFIKFDVGNV+M            IK+REKHKGTFET +
Sbjct: 133 DPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGTFETIH 191


>gb|AEO35024.1| hypothetical protein [Amblyomma maculatum]
          Length = 265

 Score =  108 bits (270), Expect(2) = 9e-41
 Identities = 51/54 (94%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   DVVSIPKTNENFRLLYDTKGRFRLHSVKDEEAKFKLCKVRSVQLGQKGIPYLNT 162
           DVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRSVQ GQKGIPYLNT
Sbjct: 88  DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYLNT 141



 Score = 83.6 bits (205), Expect(2) = 9e-41
 Identities = 41/59 (69%), Positives = 44/59 (74%)
 Frame = +2

Query: 263 DPLIRANDTIKLDLENNKIVDFIKFDVGNVIMXXXXXXXXXXXXIKSREKHKGTFETTY 439
           DPLIRANDTIKLDLE NKI DFIKFDVGNV+M            IK+REKHKGTFET +
Sbjct: 151 DPLIRANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGTFETIH 209


>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  108 bits (270), Expect(2) = 9e-41
 Identities = 51/54 (94%), Positives = 53/54 (98%)
 Frame = +1

Query: 1   DVVSIPKTNENFRLLYDTKGRFRLHSVKDEEAKFKLCKVRSVQLGQKGIPYLNT 162
           DVVSIPKTNENFRLLYDTKGRFRLHSV+D+EAKFKLCKVRSVQ GQKGIPYLNT
Sbjct: 88  DVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNT 141



 Score = 83.6 bits (205), Expect(2) = 9e-41
 Identities = 41/59 (69%), Positives = 45/59 (76%)
 Frame = +2

Query: 263 DPLIRANDTIKLDLENNKIVDFIKFDVGNVIMXXXXXXXXXXXXIKSREKHKGTFETTY 439
           DPLIRANDTIKLDLE NKIVDFIKFDVGNV+M            IK+REKHKG+FET +
Sbjct: 151 DPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIH 209