BLASTX nr result

ID: Coptis25_contig00002396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002396
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316350.1| predicted protein [Populus trichocarpa] gi|2...   292   8e-77
ref|XP_002529718.1| conserved hypothetical protein [Ricinus comm...   290   4e-76
gb|ABK96158.1| unknown [Populus trichocarpa]                          289   9e-76
ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266...   289   9e-76
emb|CAN69001.1| hypothetical protein VITISV_022485 [Vitis vinifera]   286   6e-75

>ref|XP_002316350.1| predicted protein [Populus trichocarpa] gi|222865390|gb|EEF02521.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  292 bits (748), Expect = 8e-77
 Identities = 151/238 (63%), Positives = 166/238 (69%), Gaps = 1/238 (0%)
 Frame = +1

Query: 16  AALFQLLRSQKKQLSPIFN-QTDFHTSRIGTWEQASPVKYNITPAMCPGAQRRWASRAAE 192
           AAL  LLRSQ KQLS I N  + +H  R GTW      K N   A     Q+RWASRA  
Sbjct: 5   AALLHLLRSQSKQLSTIRNFHSGYHPCRFGTWPHDQCAKLNFNHASLTATQKRWASRATT 64

Query: 193 TEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVITFM 372
           T+DD KISI            K++GVVYYGPI+STI                 GPV+TFM
Sbjct: 65  TKDDNKISIGPRRGKEAGEDEKETGVVYYGPITSTIKKVKMLSLSTCCLSVSLGPVVTFM 124

Query: 373 TSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLGTYI 552
           TSQD NVILKGAVASSVIF SA+TT ALHWFVSPY+HKL WQPGSDSFEV+MMSWL TYI
Sbjct: 125 TSQDTNVILKGAVASSVIFFSASTTAALHWFVSPYIHKLRWQPGSDSFEVEMMSWLATYI 184

Query: 553 SKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKNL 726
            KTIKF+DIR   TNRP+VTF+ANG FYFVD+EHCHNKALL RLT Q  AHESAFKNL
Sbjct: 185 PKTIKFADIRLPETNRPFVTFKANGNFYFVDSEHCHNKALLNRLTPQKSAHESAFKNL 242


>ref|XP_002529718.1| conserved hypothetical protein [Ricinus communis]
           gi|223530820|gb|EEF32684.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score =  290 bits (742), Expect = 4e-76
 Identities = 151/242 (62%), Positives = 171/242 (70%), Gaps = 2/242 (0%)
 Frame = +1

Query: 7   MTRAALFQLLRSQKKQLS-PIFNQTDFHTSRIGTWEQASPVKYNITPAM-CPGAQRRWAS 180
           M R AL  LLRSQ + LS P   Q+ +   R GTW  A   K N   A+    +Q+RWAS
Sbjct: 1   MARTALLHLLRSQTRNLSSPSTVQSGYRVCRFGTWSHAHTAKTNYNSAIQIAASQKRWAS 60

Query: 181 RAAETEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPV 360
           +A  TEDD +ISI            K++GVVYYGPISSTI                 GPV
Sbjct: 61  QARTTEDDNRISIGPRRGKEAGEDEKETGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPV 120

Query: 361 ITFMTSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWL 540
           ITFMTS DMNVILKGAVASSVIFLSA+TT ALHWFV+PY+HKL WQPGSDSFEV+MMSW+
Sbjct: 121 ITFMTSPDMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWQPGSDSFEVEMMSWM 180

Query: 541 GTYISKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFK 720
            TYI KTIKF+DIRPA TNRP+VTF+A+G FYFVDTEHCHNKALLARLT Q   +ESAFK
Sbjct: 181 ATYIPKTIKFADIRPAETNRPFVTFKADGNFYFVDTEHCHNKALLARLTPQKSQNESAFK 240

Query: 721 NL 726
           NL
Sbjct: 241 NL 242


>gb|ABK96158.1| unknown [Populus trichocarpa]
          Length = 242

 Score =  289 bits (739), Expect = 9e-76
 Identities = 150/238 (63%), Positives = 165/238 (69%), Gaps = 1/238 (0%)
 Frame = +1

Query: 16  AALFQLLRSQKKQLSPIFN-QTDFHTSRIGTWEQASPVKYNITPAMCPGAQRRWASRAAE 192
           AAL  LLRSQ KQLS I N  + +H  R GTW      K N   A     Q+RWASRA  
Sbjct: 5   AALLHLLRSQSKQLSTIRNFHSGYHPCRFGTWPHDQCAKLNFNHASLTATQKRWASRATT 64

Query: 193 TEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVITFM 372
           T+DD KISI            K++GVVYY PI+STI                 GPV+TFM
Sbjct: 65  TKDDNKISIGPRRGKEAGEDEKETGVVYYCPITSTIKKVKMLSLSTCCLSVSLGPVVTFM 124

Query: 373 TSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLGTYI 552
           TSQD NVILKGAVASSVIF SA+TT ALHWFVSPY+HKL WQPGSDSFEV+MMSWL TYI
Sbjct: 125 TSQDTNVILKGAVASSVIFFSASTTAALHWFVSPYIHKLRWQPGSDSFEVEMMSWLATYI 184

Query: 553 SKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKNL 726
            KTIKF+DIR   TNRP+VTF+ANG FYFVD+EHCHNKALL RLT Q  AHESAFKNL
Sbjct: 185 PKTIKFADIRLPETNRPFVTFKANGNFYFVDSEHCHNKALLNRLTPQKSAHESAFKNL 242


>ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266780 [Vitis vinifera]
           gi|296086053|emb|CBI31494.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  289 bits (739), Expect = 9e-76
 Identities = 147/241 (60%), Positives = 169/241 (70%), Gaps = 1/241 (0%)
 Frame = +1

Query: 7   MTRAALFQLLRSQKKQLSPIFNQTDFHTSRIGTWEQASPVKYNITPAM-CPGAQRRWASR 183
           M R AL  LLRSQ +++S     + +H  R G W  A   K NI  A+    +QRRWAS+
Sbjct: 1   MGRVALLHLLRSQSRRISSTNALSGYHPHRFGIWPHAPSAKPNINSAIQLAASQRRWASK 60

Query: 184 AAETEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVI 363
           A   EDD KISI            KDSG+VY+GPISST+                 GPVI
Sbjct: 61  ARTAEDDSKISIGPRRGGEMEEDEKDSGIVYHGPISSTVKKVKLLSLSTCCLSVSLGPVI 120

Query: 364 TFMTSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLG 543
           TFMTS +MNVILKGAVASSVIFLSA+TT ALHWFVSPYVHKL WQPGSD+FEV+MMSWL 
Sbjct: 121 TFMTSPEMNVILKGAVASSVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMSWLA 180

Query: 544 TYISKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKN 723
           TY+ KT+KF+DIRP  TNRP+VTF+ANG FYFVD EHCHNKALLA+LT +  AHESAFKN
Sbjct: 181 TYLPKTLKFADIRPPETNRPFVTFKANGNFYFVDAEHCHNKALLAKLTPRKAAHESAFKN 240

Query: 724 L 726
           L
Sbjct: 241 L 241


>emb|CAN69001.1| hypothetical protein VITISV_022485 [Vitis vinifera]
          Length = 241

 Score =  286 bits (732), Expect = 6e-75
 Identities = 146/241 (60%), Positives = 168/241 (69%), Gaps = 1/241 (0%)
 Frame = +1

Query: 7   MTRAALFQLLRSQKKQLSPIFNQTDFHTSRIGTWEQASPVKYNITPAM-CPGAQRRWASR 183
           M R AL  LLRSQ +++S     + +H  R G W  A   K NI  A+    +QRRWAS+
Sbjct: 1   MGRVALLHLLRSQSRRISSTNALSGYHPHRFGIWPHAPSAKPNINSAIQLAASQRRWASK 60

Query: 184 AAETEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVI 363
           A   ED  KISI            KDSG+VY+GPISST+                 GPVI
Sbjct: 61  ARTAEDXSKISIGPRRGGEMEEDEKDSGIVYHGPISSTVKKVKLLSLSTCCLSVSLGPVI 120

Query: 364 TFMTSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLG 543
           TFMTS +MNVILKGAVASSVIFLSA+TT ALHWFVSPYVHKL WQPGSD+FEV+MMSWL 
Sbjct: 121 TFMTSPEMNVILKGAVASSVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMSWLA 180

Query: 544 TYISKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKN 723
           TY+ KT+KF+DIRP  TNRP+VTF+ANG FYFVD EHCHNKALLA+LT +  AHESAFKN
Sbjct: 181 TYLPKTLKFADIRPPETNRPFVTFKANGNFYFVDAEHCHNKALLAKLTPRKAAHESAFKN 240

Query: 724 L 726
           L
Sbjct: 241 L 241


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