BLASTX nr result

ID: Coptis25_contig00002395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002395
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631228.1| PREDICTED: uncharacterized protein LOC100852...    78   2e-12
emb|CAN78728.1| hypothetical protein VITISV_020012 [Vitis vinifera]    78   2e-12
ref|XP_002273330.1| PREDICTED: uncharacterized protein LOC100261...    77   5e-12
ref|XP_002318564.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09
ref|XP_002511983.1| conserved hypothetical protein [Ricinus comm...    65   1e-08

>ref|XP_003631228.1| PREDICTED: uncharacterized protein LOC100852498 [Vitis vinifera]
          Length = 154

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
 Frame = -2

Query: 676 LFISLSAFLNLCAKQANRVAKKFKPDPNIPRRLGPISSLASSKQLL----NKANPFAHKK 509
           LF+S +A + LCAK A  V++K     N   +L P S LAS K+LL    NKA PF +KK
Sbjct: 20  LFLSATAIVALCAKHAGFVSRKCNKTSN--PKLVPKSPLASPKELLTSISNKAVPFIYKK 77

Query: 508 RHIN--GKPXXXXXXXXXXXXXXLWQRSILMGEKCQPPEFSGVIYYDHTGN 362
           +  +  G                LWQ+SILMGE+CQ PEFSGVI+YD  GN
Sbjct: 78  KGGDEAGAETGACRVEEGTGEGGLWQKSILMGERCQHPEFSGVIFYDGYGN 128


>emb|CAN78728.1| hypothetical protein VITISV_020012 [Vitis vinifera]
          Length = 198

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
 Frame = -2

Query: 676 LFISLSAFLNLCAKQANRVAKKFKPDPNIPRRLGPISSLASSKQLL----NKANPFAHKK 509
           LF+S +A + LCAK A  V++K     N   +L P S LAS K+LL    NKA PF +KK
Sbjct: 20  LFLSATAIVALCAKHAGFVSRKCNKTSN--PKLVPKSPLASPKELLTSISNKAVPFIYKK 77

Query: 508 RHIN--GKPXXXXXXXXXXXXXXLWQRSILMGEKCQPPEFSGVIYYDHTGN 362
           +  +  G                LWQ+SILMGE+CQ PEFSGVI+YD  GN
Sbjct: 78  KGGDEAGAETGACRVEEGTGEGGLWQKSILMGERCQHPEFSGVIFYDGYGN 128


>ref|XP_002273330.1| PREDICTED: uncharacterized protein LOC100261105 [Vitis vinifera]
          Length = 154

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
 Frame = -2

Query: 697 SCKNMTRLFISLSAFLNLCAKQANRVAKKFKPDPNIPRRLGPISSLASSKQLL----NKA 530
           S K  + L  S+S  +  C+KQA+RV+ KF+   +   ++ P S LA  KQLL    NKA
Sbjct: 19  SKKVASGLLHSVSTLVASCSKQASRVSSKFRTKVS-HSKISPKSPLARPKQLLTSISNKA 77

Query: 529 NPFAHKKRHINGKPXXXXXXXXXXXXXXLWQRSILMGEKCQPPEFSGVIYYDHTG 365
            PF HKK+    +               +WQR+ILMG+KCQP +FSGVIYYD+ G
Sbjct: 78  IPFLHKKKG-GEQLDSKEVAEEGFGDGGVWQRAILMGDKCQPLDFSGVIYYDNKG 131


>ref|XP_002318564.1| predicted protein [Populus trichocarpa] gi|222859237|gb|EEE96784.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
 Frame = -2

Query: 670 ISLSAFLNLCAKQANRVAKKFKPDP-----------NIPRRLGPISSLASSKQLL----N 536
           +S+S  + LCAK A+RV+ K K              N   R  P   LA  KQLL    N
Sbjct: 25  VSISCLMALCAKHASRVSSKLKTANKPTYKNNCSTINKSPRHSPRLPLARPKQLLTQISN 84

Query: 535 KANPFAHKKRHINGKPXXXXXXXXXXXXXXLWQRSILMGEKCQPPEFSGVIYYDHTG 365
           KA    H++R  + +               +WQ++ILMG+KCQP +FSGVIYYD +G
Sbjct: 85  KAITLMHRRRKDDRENVDVLLGPDEFGDGGVWQKAILMGDKCQPLDFSGVIYYDGSG 141


>ref|XP_002511983.1| conserved hypothetical protein [Ricinus communis]
           gi|223549163|gb|EEF50652.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 49/133 (36%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
 Frame = -2

Query: 697 SCKNMTRLFI-SLSAFLNLCAKQANRVAKKFKP-----------------DPNIPRRLGP 572
           S K +T  F+ S+S+ + +CAK A RV+ K K                   P +   L P
Sbjct: 18  SPKRLTLGFLMSISSLMAICAKHAGRVSNKLKTASFKTSHHHHRDHEGHKSPKL-LLLSP 76

Query: 571 ISSLASSKQLL----NKANPFAHKKRHINGKPXXXXXXXXXXXXXXLWQRSILMGEKCQP 404
            S L   KQLL    NKA  F H K+  +G                 WQ++ILMG+KCQP
Sbjct: 77  KSPLVRPKQLLTQISNKAITFVHSKKKRDGTADVVAPDEFGDGGV--WQKAILMGDKCQP 134

Query: 403 PEFSGVIYYDHTG 365
            +FSGVIYYD  G
Sbjct: 135 LDFSGVIYYDSCG 147


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