BLASTX nr result

ID: Coptis25_contig00002393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002393
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB29948.1| vesicle transport v-SNARE 11-like [Solanum tubero...   189   2e-46
gb|ABA40452.1| unknown [Solanum tuberosum]                            189   2e-46
emb|CBI15188.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vit...   189   2e-46
gb|ABR17161.1| unknown [Picea sitchensis]                             186   2e-45

>gb|ABB29948.1| vesicle transport v-SNARE 11-like [Solanum tuberosum]
          Length = 221

 Score =  189 bits (481), Expect = 2e-46
 Identities = 95/120 (79%), Positives = 111/120 (92%), Gaps = 2/120 (1%)
 Frame = +2

Query: 131 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 310
           MS+VFEGYERQYCELSANL+KKC SA++LDGEQKKQK++EIK G++DAEALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLTKKCNSATILDGEQKKQKVSEIKAGLDDAEALIRKMDLEAR 60

Query: 311 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTS--ASQGSREELLESGLADTKMVSADQK 484
           SL P+VKA LLAKLREYKSDLNNLKTEVK++TS  A+Q +R+ELLESG+AD  MVSADQ+
Sbjct: 61  SLPPNVKATLLAKLREYKSDLNNLKTEVKRITSGNANQAARDELLESGMADANMVSADQR 120


>gb|ABA40452.1| unknown [Solanum tuberosum]
          Length = 221

 Score =  189 bits (481), Expect = 2e-46
 Identities = 95/120 (79%), Positives = 111/120 (92%), Gaps = 2/120 (1%)
 Frame = +2

Query: 131 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 310
           MS+VFEGYERQYCELSANL+KKC SA++LDGEQKKQK++EIK G++DAEALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLTKKCNSATILDGEQKKQKVSEIKAGLDDAEALIRKMDLEAR 60

Query: 311 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTS--ASQGSREELLESGLADTKMVSADQK 484
           SL P+VKA LLAKLREYKSDLNNLKTEVK++TS  A+Q +R+ELLESG+AD  MVSADQ+
Sbjct: 61  SLPPNVKATLLAKLREYKSDLNNLKTEVKRITSGNANQAARDELLESGMADANMVSADQR 120


>emb|CBI15188.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  189 bits (480), Expect = 2e-46
 Identities = 95/120 (79%), Positives = 112/120 (93%), Gaps = 2/120 (1%)
 Frame = +2

Query: 131 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 310
           MS+VFEGYERQYCELSANLS+KCT+ASLL+GEQKKQK++EIK G++DA+ALIRKMDLEAR
Sbjct: 59  MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 118

Query: 311 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSA--SQGSREELLESGLADTKMVSADQK 484
           SLQPSVKAMLLAKLREYK+DLNN+K EVK++TSA  +Q +R+ LLESG+ADT  VSADQK
Sbjct: 119 SLQPSVKAMLLAKLREYKTDLNNVKNEVKRITSANTNQAARDNLLESGMADTMTVSADQK 178


>ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vitis vinifera]
          Length = 221

 Score =  189 bits (480), Expect = 2e-46
 Identities = 95/120 (79%), Positives = 112/120 (93%), Gaps = 2/120 (1%)
 Frame = +2

Query: 131 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 310
           MS+VFEGYERQYCELSANLS+KCT+ASLL+GEQKKQK++EIK G++DA+ALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 60

Query: 311 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSA--SQGSREELLESGLADTKMVSADQK 484
           SLQPSVKAMLLAKLREYK+DLNN+K EVK++TSA  +Q +R+ LLESG+ADT  VSADQK
Sbjct: 61  SLQPSVKAMLLAKLREYKTDLNNVKNEVKRITSANTNQAARDNLLESGMADTMTVSADQK 120


>gb|ABR17161.1| unknown [Picea sitchensis]
          Length = 222

 Score =  186 bits (472), Expect = 2e-45
 Identities = 94/121 (77%), Positives = 110/121 (90%), Gaps = 2/121 (1%)
 Frame = +2

Query: 131 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 310
           MSEVFEGYERQYCELSANLS+KCTSA+LL+GEQKKQK++E+KTG+++AEALIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTSAALLNGEQKKQKLSELKTGLDEAEALIRKMDLEAR 60

Query: 311 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSA--SQGSREELLESGLADTKMVSADQK 484
           SLQPS+KA  LAKLREYKSDLNNLK +VKK +S   SQ +R+ELLESG+ DT M SADQ+
Sbjct: 61  SLQPSLKATFLAKLREYKSDLNNLKRDVKKTSSPIDSQAARDELLESGMGDTLMASADQR 120

Query: 485 G 487
           G
Sbjct: 121 G 121


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