BLASTX nr result

ID: Coptis25_contig00002378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002378
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254...   128   6e-28
emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]   125   3e-27
ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002517209.1| conserved hypothetical protein [Ricinus comm...   114   6e-24

>ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254485 [Vitis vinifera]
          Length = 235

 Score =  128 bits (321), Expect = 6e-28
 Identities = 71/118 (60%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
 Frame = -1

Query: 348 KEAGKEENRVSWFLDEDPSPRPPKCTLLWKELLRLKKQRAXXXXXXXXXXXXXXXXXXXX 169
           +EA KEE+RVSWF+D+DPSPRPPKCT+LWKELLRLKKQRA                    
Sbjct: 111 EEANKEESRVSWFVDDDPSPRPPKCTVLWKELLRLKKQRA------STLSPSSSSSSSSS 164

Query: 168 XXXSVDAG--KTGKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSIQGKTSVM 1
               VD G    GKE    REK VKRIK+GLERTRSASIRIRPVINVP   QGK S++
Sbjct: 165 SSSLVDMGTMDQGKEGSGKREKQVKRIKKGLERTRSASIRIRPVINVPICTQGKASLL 222


>emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]
          Length = 301

 Score =  125 bits (315), Expect = 3e-27
 Identities = 70/116 (60%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
 Frame = -1

Query: 342 AGKEENRVSWFLDEDPSPRPPKCTLLWKELLRLKKQRAXXXXXXXXXXXXXXXXXXXXXX 163
           A KEE+RVSWF+D+DPSPRPPKCT+LWKELLRLKKQRA                      
Sbjct: 113 ANKEESRVSWFVDDDPSPRPPKCTVLWKELLRLKKQRA------STLSPSSSSSSSSSSS 166

Query: 162 XSVDAG--KTGKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSIQGKTSVM 1
             VD G    GKE    REK VKRIK+GLERTRSASIRIRPVINVP   QGK S++
Sbjct: 167 SLVDMGTMDQGKEGSGKREKQVKRIKKGLERTRSASIRIRPVINVPICTQGKASLL 222


>ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|222863752|gb|EEF00883.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  120 bits (302), Expect = 9e-26
 Identities = 66/116 (56%), Positives = 75/116 (64%)
 Frame = -1

Query: 348 KEAGKEENRVSWFLDEDPSPRPPKCTLLWKELLRLKKQRAXXXXXXXXXXXXXXXXXXXX 169
           +E  KEE RV WF+DEDPSPRPPKCT+LWKELLRLKKQRA                    
Sbjct: 110 EEMSKEEPRV-WFVDEDPSPRPPKCTVLWKELLRLKKQRASSLSPSSSSSSTSSTSSSAL 168

Query: 168 XXXSVDAGKTGKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSIQGKTSVM 1
               +   + GK   WNREKHVKRIK+GLERTRSASIRIRP+INVP     K+S +
Sbjct: 169 AD--IVTKEEGKHGSWNREKHVKRIKKGLERTRSASIRIRPMINVPICTPVKSSAL 222


>ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|222852340|gb|EEE89887.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  115 bits (288), Expect = 4e-24
 Identities = 64/116 (55%), Positives = 75/116 (64%)
 Frame = -1

Query: 348 KEAGKEENRVSWFLDEDPSPRPPKCTLLWKELLRLKKQRAXXXXXXXXXXXXXXXXXXXX 169
           +E  KEE RV WF+D+DPSPRPPKCT+LWKELLRLKKQRA                    
Sbjct: 109 EEVSKEEPRV-WFVDDDPSPRPPKCTVLWKELLRLKKQRASSLSPSSSSSSTSSSSSSLA 167

Query: 168 XXXSVDAGKTGKESLWNREKHVKRIKQGLERTRSASIRIRPVINVPSSIQGKTSVM 1
              + + GK G     N EKHVKRIK+GLERTRSAS+RIRP+INVP   Q K+S +
Sbjct: 168 DIATKEEGKRGS---GNGEKHVKRIKKGLERTRSASMRIRPMINVPICTQMKSSAL 220


>ref|XP_002517209.1| conserved hypothetical protein [Ricinus communis]
           gi|223543844|gb|EEF45372.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/113 (54%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
 Frame = -1

Query: 336 KEENRVSWFLDEDPSPRPPKCTLLWKELLRLKKQRAXXXXXXXXXXXXXXXXXXXXXXXS 157
           KEE RVSWF+D+DPSPRPPKCT+LWKELLRLKKQRA                        
Sbjct: 123 KEEPRVSWFVDDDPSPRPPKCTVLWKELLRLKKQRA---SSLSPSSSSSSTSSSSSSLAD 179

Query: 156 VDAGKTGKESLWNREKHV-KRIKQGLERTRSASIRIRPVINVPSSIQGKTSVM 1
           +   + GKE   N+EKH  KR+K+GLERTRSA+IRIRP+INVP   Q K+S +
Sbjct: 180 IVTAEEGKEGCGNKEKHAGKRMKKGLERTRSATIRIRPMINVPICTQVKSSAL 232


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