BLASTX nr result
ID: Coptis25_contig00002374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002374
(2140 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512226.1| transcription factor, putative [Ricinus comm... 334 e-102
ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|2... 309 e-100
ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL... 312 4e-96
emb|CAN72556.1| hypothetical protein VITISV_028885 [Vitis vinifera] 308 8e-91
ref|XP_003591003.1| Trihelix transcription factor [Medicago trun... 296 3e-86
>ref|XP_002512226.1| transcription factor, putative [Ricinus communis]
gi|223548187|gb|EEF49678.1| transcription factor,
putative [Ricinus communis]
Length = 634
Score = 334 bits (856), Expect(2) = e-102
Identities = 234/562 (41%), Positives = 305/562 (54%), Gaps = 66/562 (11%)
Frame = -2
Query: 1992 MFNGVPEQFHQFIASRSAXXXXXXXXXXXTFS-----------VHELQPSNQVFQSH--- 1855
MF GVP+QFHQFIASR++ S H + + SH
Sbjct: 1 MFEGVPDQFHQFIASRTSSLPLPVSFPPLHGSSTSSNTSFSSFYHPYTTATTITNSHHNQ 60
Query: 1854 --------LLHPLHRQHSTH----EDEEKEEDRAVAGSLDIEGMRSASEPMEPWLKEEVL 1711
LH LH HS+H E+KEED VA +L+IE RS E ++PW +EVL
Sbjct: 61 QVPLQHPNFLHSLH--HSSHPTGKNHEDKEEDSMVAMNLEIERERSIQESVDPWSNDEVL 118
Query: 1710 ALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXXXXYRS 1534
ALL IRSS+ F ++ W HVSRKLAELGFKRSAEKCKEKFEE ++ YR
Sbjct: 119 ALLRIRSSMENWFPEYTWEHVSRKLAELGFKRSAEKCKEKFEEENRYFNNINYSKNNYRF 178
Query: 1533 FNELEALFEDQTHKSVDD--------KMLKSN--EEEKMDVNMEENS-ANETLEN-PVEE 1390
F ELE L+ +++ + KM K++ EE+K++ N+EE+S ++T+ N P EE
Sbjct: 179 FGELEELYNGHNNQNPQEAVAAEKNKKMDKASQKEEDKIEQNVEEDSRVDQTVGNYPTEE 238
Query: 1389 --NQYVVXXXXXXXXKIYHQLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXX 1219
N V K + E+ KGF E ++KIM QQEE+H KLLEDM
Sbjct: 239 DNNGKEVEKSKSKKRKRQIKFEMFKGFCEDIISKIMAQQEEMHNKLLEDMVKRDEEKVAR 298
Query: 1218 XEGWKKKEMEIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLK------- 1060
E WKK+E++ KE+E RAQEQ LA DR++ II FL +F++ +S + ++
Sbjct: 299 EEAWKKQEIDRINKELELRAQEQVLAGDRQTAIINFLKKFSSSSSSSSCSSIEILQHSSA 358
Query: 1059 DEILXXXXXXXXXXXXSNVLAERTCSVSRAIN---PNAPTSNAIILAKASQNQNPTPSQH 889
++L S V+A S+ N P APTS I L Q+ +P ++
Sbjct: 359 HDLLKVPNSSNPSSSSSLVIAHNPNPTSQTNNQSKPEAPTSTRIAL--GHQDSSPAQAKS 416
Query: 888 NPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXLA-PQNPNS-----------TSNDR 745
P S + P P + P P+S TSN++
Sbjct: 417 KPAKLTSLQEKQAPQIPSSSSFSIATTQNPKLLNSQSNPLAPSSLSNDILYKKPTTSNNK 476
Query: 744 EDYGKRWPRDEVNSLINLRCNLQTSVDDKEST--KAPLWERISQGMLELGYKRSAKKCKE 571
+D GKRWP+DEV +LINLRC+L S +DKE+T KAPLWERISQGMLELGYKRSAK+CKE
Sbjct: 477 DDLGKRWPKDEVLALINLRCSLCNSNEDKEATTVKAPLWERISQGMLELGYKRSAKRCKE 536
Query: 570 KWENINKYFRKTKDANKKRSLD 505
KWENINKYFRKTKD NKKRS+D
Sbjct: 537 KWENINKYFRKTKDVNKKRSVD 558
Score = 66.2 bits (160), Expect(2) = e-102
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = -3
Query: 449 NKKRSLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTVTPETGVGA---CPQD 279
NKKRS+DS+TCPYFHQL+TLYNQG L+ P +A ++ PE + +
Sbjct: 552 NKKRSVDSRTCPYFHQLSTLYNQGTLA----APPLEAGKERPQSALPENHTASKLNSSLN 607
Query: 278 AGFSDPIVHVNEGDKNMVQASPQEYQY 198
G S+ + NEG+KN+ QAS ++++
Sbjct: 608 NGSSNSTLLGNEGEKNLAQASGFDFEF 634
>ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|222858011|gb|EEE95558.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 309 bits (791), Expect(2) = e-100
Identities = 217/559 (38%), Positives = 284/559 (50%), Gaps = 63/559 (11%)
Frame = -2
Query: 1992 MFNGVPEQFHQFIASRSAXXXXXXXXXXXT-----------FSVHELQPSNQVFQSHLLH 1846
MF GVPEQFHQFIASR+ F + Q +LLH
Sbjct: 1 MFEGVPEQFHQFIASRTTSLPPPGLSFPLLQGSSNTTNFPSFYPYTTSSQQVPLQPNLLH 60
Query: 1845 P-LHRQHSTHEDEEKEEDRAVAGSLD-IEGMRSASEPMEPWLKEEVLALLTIRSSLGIEF 1672
P LH+ T++D EK+E+ VA ++D E RS E + PW +EVLALL IRSS+ F
Sbjct: 61 PILHQGAPTNKDGEKQENNLVAMNMDQFERERSMPELVNPWSNDEVLALLRIRSSMETWF 120
Query: 1671 SDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXXXXXXYR---SFNELEALFED- 1504
+F W HVSRKLAE GFKRSAEKCKEKFEE S+ SF+ELE ++
Sbjct: 121 PEFTWEHVSRKLAEAGFKRSAEKCKEKFEEESRYFNISNINYNKNYRASFSELEEIYHGD 180
Query: 1503 ----------QTHKSVDDKMLKSNEEEKMDVNMEENSA-NETLENPVEENQY----VVXX 1369
+ +K +D + E++KM N+EE + ++T+ N +++ +V
Sbjct: 181 QNPHQEVTAGEKNKKIDKPGTEDEEQDKMRQNLEEETRIDQTVGNQTDQDNNGKLALVEK 240
Query: 1368 XXXXXXKIYHQLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEM 1192
K + E+ K E VN +M QQEE+H KLLED+ E KK EM
Sbjct: 241 SKSNKRKREKKFEMFKRLCEDIVNTMMAQQEEMHNKLLEDIVKRDEEKVAKEEARKKLEM 300
Query: 1191 EIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLKDEILXXXXXXXXXXXX 1012
+ KE+E RA EQALA DR++ +I FL +FT+ S + +L ++I
Sbjct: 301 DRINKELELRAHEQALANDRQATLIRFLKKFTSSDSSVE--ILGEKIAPDPVNVPNSS-- 356
Query: 1011 SNVLAERTCSVSRAINPNAPTSNAIILAKASQNQNPTPSQHNP----KLPNSRILEHPPH 844
N + + + + NP + TSN L A+ + Q + K S P
Sbjct: 357 -NASSSSSLVLEQNPNPASQTSNESQLKTATSSATALDHQKSTSILAKTNTSWTENQEPQ 415
Query: 843 NPXXXXXXXXXXXXXXXXXXL---APQNPN----------------------STSNDRED 739
NP APQNPN + S ++D
Sbjct: 416 NPTSTLARNIPQVPTTSSTLAVPAAPQNPNFLNSHSSTSGPPNTLPSHNKVQAKSTYKDD 475
Query: 738 YGKRWPRDEVNSLINLRCNLQTSVDDKE-STKAPLWERISQGMLELGYKRSAKKCKEKWE 562
GKRWPRDEV +LINLRC+L + +DKE S +APLWERISQGMLE GYKRSAK+CKEKWE
Sbjct: 476 IGKRWPRDEVLALINLRCSLYNNNEDKEGSARAPLWERISQGMLESGYKRSAKRCKEKWE 535
Query: 561 NINKYFRKTKDANKKRSLD 505
NINKYFRKTKD NKKRS+D
Sbjct: 536 NINKYFRKTKDVNKKRSID 554
Score = 84.3 bits (207), Expect(2) = e-100
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = -3
Query: 449 NKKRSLDSKTCPYFHQLNTLYNQGRLSMPSEGPENQAHSAEIRTVTPETGVGACPQDAGF 270
NKKRS+DS+TCPYFHQL+TLYNQG L P+N++ S E R+ PET + Q+ G
Sbjct: 548 NKKRSIDSRTCPYFHQLSTLYNQGTL----VAPDNRSASPENRSSLPETRHSSSSQN-GT 602
Query: 269 SDPIVHVNEGDKNMVQASPQEYQY 198
S+ +HV +G+KNMVQ P ++++
Sbjct: 603 SNSTLHVGDGEKNMVQVPPLDFEF 626
>ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL2-like [Vitis vinifera]
Length = 615
Score = 312 bits (799), Expect(2) = 4e-96
Identities = 227/569 (39%), Positives = 294/569 (51%), Gaps = 73/569 (12%)
Frame = -2
Query: 1992 MFNGVP-EQFHQFIASRSAXXXXXXXXXXXT------FSVH---------ELQPS----- 1876
MF+GVP +QFHQF+A+ +A F +H +L PS
Sbjct: 1 MFDGVPSDQFHQFVAAAAAAAASSTTSQLQPPPPSLSFPLHVSSSTFPSFDLYPSGSGGG 60
Query: 1875 -------NQVFQ-SHLLHPLHRQHST--HEDEEKEEDRAVAGSLDIEGMRSASEPMEPWL 1726
+Q Q HLLHPLH S +D++KEE+ V+ +L+ + RS + + PW
Sbjct: 61 GGAAAAAHQPLQVPHLLHPLHHHSSAPHKDDQDKEENALVSINLEPQKERSMLDLINPWS 120
Query: 1725 KEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXX 1549
+EVLALL IRSS+ + DF W HVSRKLAE GFKRSAEKCKEKFE+ S+
Sbjct: 121 NDEVLALLRIRSSMENWYPDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTMNYS 180
Query: 1548 XXYRSFNELEALFEDQTHKSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPVEEN 1387
YR F+ELE L+ ++ D K+++ EE D ++EE+S NET + NP E
Sbjct: 181 KNYRFFSELEELYHGESPHQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPCLET 238
Query: 1386 QYVVXXXXXXXXKIYHQ---LELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXX 1219
+ V K + Q E+ KGF E V+K+M QQEE+H KLLEDM
Sbjct: 239 EKVEDKSKGKKRKRHTQNKSFEMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAR 298
Query: 1218 XEGWKKKEMEIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGT-------SPTQGLLLK 1060
E WKK+EM+ KE+E R EQA+A DR++ II FL +FT+ +G L K
Sbjct: 299 EEAWKKQEMDRINKEIEIREHEQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSK 358
Query: 1059 -----------DEILXXXXXXXXXXXXSN-------------VLAERTCSVSRAINPNAP 952
IL N V + CS++ NPNAP
Sbjct: 359 VPSRSNPPTSPSSILPQNPNPTSHLSPQNKQLEAPTSSRKVIVPHQNPCSLTTPTNPNAP 418
Query: 951 TSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXLAPQ 772
+ +A +QNPT + PNS + P P
Sbjct: 419 ------IDEAQPSQNPTSMVLESQNPNSLNTQKRPSAPTSF------------------- 453
Query: 771 NPNSTSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKR 592
P+ T + ++ GKRWPRDEV +LINLRC+L +V+DKE K PLWERISQGML LGYKR
Sbjct: 454 -PSITDHRDQELGKRWPRDEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKR 510
Query: 591 SAKKCKEKWENINKYFRKTKDANKKRSLD 505
SAK+CKEKWENINKYFRKTKD +KKRSLD
Sbjct: 511 SAKRCKEKWENINKYFRKTKDVSKKRSLD 539
Score = 68.6 bits (166), Expect(2) = 4e-96
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = -3
Query: 449 NKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE---GPENQAHSAEIRTVTPETGVGACPQD 279
+KKRSLDS+TCPYFHQL+TLY+QG L +PS PEN +S+E + PE VG +
Sbjct: 533 SKKRSLDSRTCPYFHQLSTLYSQGTLVVPSSEAPAPENCLNSSENHSSLPENQVGGSSSN 592
Query: 278 AGFSDPIVHVNEGDKNMVQASPQEYQY 198
+EG++N Q ++++
Sbjct: 593 TNMH----AADEGEENAAQLPAYDFKF 615
>emb|CAN72556.1| hypothetical protein VITISV_028885 [Vitis vinifera]
Length = 569
Score = 308 bits (790), Expect(2) = 8e-91
Identities = 221/551 (40%), Positives = 287/551 (52%), Gaps = 55/551 (9%)
Frame = -2
Query: 1992 MFNGVP-EQFHQFIASRSAXXXXXXXXXXXTFSVHELQPSNQVFQSHLLHPLHRQHSTH- 1819
MF+GVP +QFHQF+A+ +A + +LQP L PLH ST
Sbjct: 1 MFDGVPSDQFHQFVAAAAAAAASS--------TTSQLQPP----PPSLSFPLHVSSSTFP 48
Query: 1818 -----------EDEEKEEDRAVAGSLDIEGMRSASEPMEPWLKEEVLALLTIRSSLGIEF 1672
+D++KEE+ V+ +L+ + RS + + PW +EVLALL IRSS+ +
Sbjct: 49 SFDLYPSGGGGDDQDKEENALVSINLEPQKERSMLDLINPWSNDEVLALLRIRSSMENWY 108
Query: 1671 SDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXXXXYRSFNELEALFEDQTH 1495
DF W HVSRKLAE GFKRSAEKCKEKFE+ S+ YR F+ELE L+ ++
Sbjct: 109 PDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTMNYSKNYRFFSELEELYHGESP 168
Query: 1494 KSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPVEENQYVVXXXXXXXXKIYHQ- 1336
D K+++ EE D ++EE+S NET + NP E + V K + Q
Sbjct: 169 HQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPCLETEKVEDKSKGKKRKRHTQN 226
Query: 1335 --LELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEMEIFYKEMEF 1165
E+ KGF E V+K+M QQEE+H KLLEDM E WKK+EM+ KE+E
Sbjct: 227 KSFEMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAREEAWKKQEMDRINKEIEI 286
Query: 1164 RAQEQALACDRESKIIEFLNQFTTGT-------SPTQGLLLK-----------DEILXXX 1039
R EQA+A DR++ II FL +FT+ +G L K IL
Sbjct: 287 REHEQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSKVPSRSNPPTSTSSILPQN 346
Query: 1038 XXXXXXXXXSN-------------VLAERTCSVSRAINPNAPTSNAIILAKASQNQNPTP 898
N V + CS++ NPNAP + +A +QNPT
Sbjct: 347 PNPTSHLSPQNKQLEAPTSSRKVIVPHQNPCSLTTPTNPNAP------IDEAQPSQNPTS 400
Query: 897 SQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXLAPQNPNSTSNDREDYGKRWPR 718
+ PNS + P P P+ T + ++ GKRWPR
Sbjct: 401 MVLESQNPNSLNTQKSPSAPSSF--------------------PSITDHRDQELGKRWPR 440
Query: 717 DEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKYFRK 538
DEV +LINLRC+L +V+DKE K PLWERISQGML LGYKRSAK+CKEKWENINKYFRK
Sbjct: 441 DEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKRSAKRCKEKWENINKYFRK 498
Query: 537 TKDANKKRSLD 505
TKD +KKRSLD
Sbjct: 499 TKDVSKKRSLD 509
Score = 54.3 bits (129), Expect(2) = 8e-91
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = -3
Query: 449 NKKRSLDSKTCPYFHQLNTLYNQGRLSMPS 360
+KKRSLDS+TCPYFHQL+TLY+QG L +PS
Sbjct: 503 SKKRSLDSRTCPYFHQLSTLYSQGTLVVPS 532
>ref|XP_003591003.1| Trihelix transcription factor [Medicago truncatula]
gi|355480051|gb|AES61254.1| Trihelix transcription factor
[Medicago truncatula]
Length = 557
Score = 296 bits (758), Expect(2) = 3e-86
Identities = 197/530 (37%), Positives = 275/530 (51%), Gaps = 34/530 (6%)
Frame = -2
Query: 1992 MFNGVPEQFHQFIASRSAXXXXXXXXXXXTFSVHE----LQPSNQV------------FQ 1861
M++GVP+QFHQFI R++ + + P NQ Q
Sbjct: 1 MYDGVPDQFHQFITPRTSSSSLPLHLPFPLSTPNNTFPPFDPYNQQNHPSQHHQLPLQVQ 60
Query: 1860 SHLLHPLHRQHSTHEDEEKEEDRAVAG----SLDIEGMRSASEPMEPWLKEEVLALLTIR 1693
+LLHPLH H+D+E +E + +D + + + ++PW +EVLALL IR
Sbjct: 61 PNLLHPLH----PHKDDEDKEQNSTPSMNNFQIDRDQRQILPQLIDPWTNDEVLALLKIR 116
Query: 1692 SSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXXXXXXY-----RSFN 1528
SS+ F DF W HVSRKLAE+G+KRSAEKCKEKFEE S+ R
Sbjct: 117 SSMESWFPDFTWEHVSRKLAEVGYKRSAEKCKEKFEEESRFFNNINHNQNSFGKNFRFVT 176
Query: 1527 ELEALFED---QTHKSVDDKMLKSNEEEKMDVNMEENSANETLENPVEENQYVVXXXXXX 1357
ELE +++ + +K++ + ++ ++KMD + E++ ++ L + E + V
Sbjct: 177 ELEEVYQGGGGENNKNLVEAEKQNEVQDKMDPHEEDSRMDDVLVSKKSEEEVVEKGTTND 236
Query: 1356 XXKIYH----QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXEGWKKKEM 1192
K + E+ KGF E V K+M QQEE+H KL+EDM E WKK+EM
Sbjct: 237 EKKRKRSGDDRFEVFKGFCESVVKKMMDQQEEMHNKLIEDMVKRDEEKFSREEAWKKQEM 296
Query: 1191 EIFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLKDEILXXXXXXXXXXXX 1012
E KE+E A EQA+A DR++ II+FLN+F+T + + + ++
Sbjct: 297 EKMNKELELMAHEQAIAGDRQAHIIQFLNKFSTSANSSSLTSMSTQL---------QAYL 347
Query: 1011 SNVLAERTCSVSRAINPNAPTSNAIILAKASQNQNPTPSQHNPKLPNSRILEHPPHNPXX 832
+ + + + S + NPN T L K Q PS P + + + +NP
Sbjct: 348 ATLTSNSSSSTLHSQNPNPET-----LKKTLQPIPENPSSTLPSSSTTLVAQPRNNNPIS 402
Query: 831 XXXXXXXXXXXXXXXXLAPQNPNSTSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKES 652
+S +R+D G+RWP+DEV +LINLRCN + S
Sbjct: 403 SYSLI-------------------SSGERDDIGRRWPKDEVLALINLRCNNNNEEKEGNS 443
Query: 651 T-KAPLWERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLD 505
KAPLWERISQGMLELGYKRSAK+CKEKWENINKYFRKTKDAN+KRSLD
Sbjct: 444 NNKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDANRKRSLD 493
Score = 51.2 bits (121), Expect(2) = 3e-86
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -3
Query: 449 NKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE 357
N+KRSLDS+TCPYFH L LYNQG+L + S+
Sbjct: 487 NRKRSLDSRTCPYFHLLTNLYNQGKLVLQSD 517