BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002373
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37720.3| unnamed protein product [Vitis vinifera]              176   1e-41
ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-41
ref|XP_002514404.1| conserved hypothetical protein [Ricinus comm...   168   3e-39
gb|AAM67277.1| unknown [Arabidopsis thaliana]                         155   2e-35
gb|AAM97056.1| putative protein [Arabidopsis thaliana] gi|300237...   155   2e-35

>emb|CBI37720.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  176 bits (445), Expect = 1e-41
 Identities = 88/159 (55%), Positives = 116/159 (72%)
 Frame = +1

Query: 1   ESKVRRLLKFDMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDF 180
           ESKVRRLLK DM+AVL++LL QNE LLAL+VF DVRKEYWYKPQV +YA+MI++  SN  
Sbjct: 43  ESKVRRLLKLDMIAVLKQLLNQNECLLALKVFDDVRKEYWYKPQVSLYAEMIRVLGSNGL 102

Query: 181 XXXXXXXXXXXXMERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTF 360
                        E   L+ +TEGFNAL RTL+++  T  AM+CFQ MK   C+PN+S+F
Sbjct: 103 FEQVHLLLSYLKKET-GLELETEGFNALLRTLIDFDMTGPAMECFQLMKTSGCEPNKSSF 161

Query: 361 KILVSGLESKGETGLSSMLRQEAEKYFGWPLEYQEEEKE 477
           +IL+ GLESKGE  +S+ ++ +A+KYFG  LE+ EEE++
Sbjct: 162 RILIKGLESKGELDISATVKLDAQKYFGESLEFLEEEED 200


>ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Vitis vinifera]
          Length = 246

 Score =  176 bits (445), Expect = 1e-41
 Identities = 88/159 (55%), Positives = 116/159 (72%)
 Frame = +1

Query: 1   ESKVRRLLKFDMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDF 180
           ESKVRRLLK DM+AVL++LL QNE LLAL+VF DVRKEYWYKPQV +YA+MI++  SN  
Sbjct: 81  ESKVRRLLKLDMIAVLKQLLNQNECLLALKVFDDVRKEYWYKPQVSLYAEMIRVLGSNGL 140

Query: 181 XXXXXXXXXXXXMERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTF 360
                        E   L+ +TEGFNAL RTL+++  T  AM+CFQ MK   C+PN+S+F
Sbjct: 141 FEQVHLLLSYLKKET-GLELETEGFNALLRTLIDFDMTGPAMECFQLMKTSGCEPNKSSF 199

Query: 361 KILVSGLESKGETGLSSMLRQEAEKYFGWPLEYQEEEKE 477
           +IL+ GLESKGE  +S+ ++ +A+KYFG  LE+ EEE++
Sbjct: 200 RILIKGLESKGELDISATVKLDAQKYFGESLEFLEEEED 238


>ref|XP_002514404.1| conserved hypothetical protein [Ricinus communis]
           gi|223546501|gb|EEF48000.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 248

 Score =  168 bits (425), Expect = 3e-39
 Identities = 83/159 (52%), Positives = 112/159 (70%)
 Frame = +1

Query: 4   SKVRRLLKFDMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFX 183
           SK  RLLK DML+VLRELLRQN  LLAL+VFKD+RKEYWYKPQV +Y DMIK  ASN + 
Sbjct: 89  SKFSRLLKLDMLSVLRELLRQNHCLLALKVFKDIRKEYWYKPQVSLYDDMIKAMASNGYF 148

Query: 184 XXXXXXXXXXXMERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFK 363
                       E   ++ +T+ FNALF TL+ +  +  AM+ +  MK V+C+P+  TF+
Sbjct: 149 EQVELLCIYLKTETNLIEPETDAFNALFTTLITFNLSGFAMEFYGLMKAVKCEPDRLTFR 208

Query: 364 ILVSGLESKGETGLSSMLRQEAEKYFGWPLEYQEEEKEE 480
           IL++GLES GE+  S++LRQ+A K++G  LE+ EEE++E
Sbjct: 209 ILINGLESMGESSASAILRQDAHKFYGQSLEFLEEEEDE 247


>gb|AAM67277.1| unknown [Arabidopsis thaliana]
          Length = 262

 Score =  155 bits (393), Expect = 2e-35
 Identities = 79/158 (50%), Positives = 108/158 (68%)
 Frame = +1

Query: 4   SKVRRLLKFDMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFX 183
           SK RRLLKFDM+AVLRELLRQNE  LAL+VF+++RKEYWYKPQV +Y DMI + A N   
Sbjct: 97  SKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLM 156

Query: 184 XXXXXXXXXXXMERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFK 363
                       E+  L A+ E FN L   L+N+      MDC+ FM+ +  +P+ ++F+
Sbjct: 157 EEVNYLYSAMKSEK-GLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFR 215

Query: 364 ILVSGLESKGETGLSSMLRQEAEKYFGWPLEYQEEEKE 477
           +LV GLES GE GLS+++RQ+A +Y+G  LE+ EE++E
Sbjct: 216 VLVLGLESNGEMGLSAIVRQDAHEYYGESLEFIEEDEE 253


>gb|AAM97056.1| putative protein [Arabidopsis thaliana] gi|30023740|gb|AAP13403.1|
           At5g09320 [Arabidopsis thaliana]
          Length = 262

 Score =  155 bits (393), Expect = 2e-35
 Identities = 79/158 (50%), Positives = 108/158 (68%)
 Frame = +1

Query: 4   SKVRRLLKFDMLAVLRELLRQNEALLALQVFKDVRKEYWYKPQVLVYADMIKMFASNDFX 183
           SK RRLLKFDM+AVLRELLRQNE  LAL+VF+++RKEYWYKPQV +Y DMI + A N   
Sbjct: 97  SKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLM 156

Query: 184 XXXXXXXXXXXMERYHLDADTEGFNALFRTLMNYGFTTSAMDCFQFMKEVQCDPNESTFK 363
                       E+  L A+ E FN L   L+N+      MDC+ FM+ +  +P+ ++F+
Sbjct: 157 EEVNYLYSAMKSEK-GLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFR 215

Query: 364 ILVSGLESKGETGLSSMLRQEAEKYFGWPLEYQEEEKE 477
           +LV GLES GE GLS+++RQ+A +Y+G  LE+ EE++E
Sbjct: 216 VLVLGLESNGEMGLSAIVRQDAHEYYGESLEFIEEDEE 253