BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002367
         (1854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi...   680   0.0  
ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|2...   652   0.0  
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm...   643   0.0  
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi...   625   e-176
ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   622   e-175

>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic [Vitis vinifera]
          Length = 511

 Score =  680 bits (1755), Expect = 0.0
 Identities = 338/445 (75%), Positives = 382/445 (85%)
 Frame = -1

Query: 1587 KKNEFRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEEMNNKLSSRELQ 1408
            K  EFR F + ELD+FLTSD++DEM EGFFEAIEELERM REP+DVLEEMN++LS+RELQ
Sbjct: 67   KIREFRLFKSVELDQFLTSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSARELQ 126

Query: 1407 LVLVYFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLIEGEHSXXXXXX 1228
            LVLVYFSQEGRDSWCALEVFEWL+KEN+VDKETMELMVSIMC WV+KLIEGEH       
Sbjct: 127  LVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEHDVGDVVD 186

Query: 1227 XXXXXXXXXLKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTVDDEENNKGGPT 1048
                     LKP FSMIEKVISLYWEM +KE  VLFVK+VL R IAY+ DD + +KGGPT
Sbjct: 187  LLVDMDCVGLKPGFSMIEKVISLYWEMEEKEKAVLFVKEVLRREIAYSEDDGDGHKGGPT 246

Query: 1047 GYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEFSKAFRKLKGFV 868
            GYLAWKMM +GNY GAVKLVI  RESGLKPEVYSYLIAMTA+VKELNEF+KA RKLKGF 
Sbjct: 247  GYLAWKMMAEGNYRGAVKLVIHLRESGLKPEVYSYLIAMTAVVKELNEFAKALRKLKGFT 306

Query: 867  KAGSIPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHERLLAMYICAGEG 688
            K+G I ELDAENV LIE YQSDLL+DGVRLS WVI+EG S    VV+ERLLAMYICAG G
Sbjct: 307  KSGLIAELDAENVELIEKYQSDLLADGVRLSSWVIQEGRSPLHGVVYERLLAMYICAGRG 366

Query: 687  LKAEQQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTNSIRRKKTLSWL 508
            L+AE+QLWEMKL+GKE +RELYDIVLAICAS+ EA+++SRLLTG+EVT+SIRRKKTLSWL
Sbjct: 367  LEAERQLWEMKLVGKEADRELYDIVLAICASKKEASAISRLLTGMEVTSSIRRKKTLSWL 426

Query: 507  LRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSVEPYLSLCKYLS 328
            LRGY+KG HF DAS+TIIKMLD+GL PEYLDRAAVLQGLR  IQ TG+VE YL LCK+LS
Sbjct: 427  LRGYIKGSHFDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQTGNVETYLKLCKHLS 486

Query: 327  DADLIGPCLVYFYVDRYKLWVIKMV 253
            DA+LIGPCLVY Y+ +YKLW++K +
Sbjct: 487  DANLIGPCLVYLYIKKYKLWILKTI 511


>ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|222850384|gb|EEE87931.1|
            predicted protein [Populus trichocarpa]
          Length = 500

 Score =  652 bits (1682), Expect = 0.0
 Identities = 325/475 (68%), Positives = 387/475 (81%), Gaps = 2/475 (0%)
 Frame = -1

Query: 1671 NTIMKHYSCPRVEIKTSVLKIPSLLFVK--KKNEFRSFGATELDRFLTSDEKDEMGEGFF 1498
            +TI+ +Y  P         K P+ +  K  K  EFR F + ELD+++TSD+++EMGEGFF
Sbjct: 35   STIICNYQTP---------KRPNFVVAKTTKVREFRLFKSVELDQYVTSDDEEEMGEGFF 85

Query: 1497 EAIEELERMVREPADVLEEMNNKLSSRELQLVLVYFSQEGRDSWCALEVFEWLQKENKVD 1318
            EAIEELERM REP+D+LEEMN++LS+RELQLVLVYFSQEGRDSWCALEVFEWL+KEN+VD
Sbjct: 86   EAIEELERMTREPSDILEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVD 145

Query: 1317 KETMELMVSIMCGWVRKLIEGEHSXXXXXXXXXXXXXXXLKPSFSMIEKVISLYWEMGKK 1138
            KETMELMVSIMC WV+KLIEGE                 LKPSFSMIEKVISLYW+MGKK
Sbjct: 146  KETMELMVSIMCSWVKKLIEGEQDVGDVVDLLVDMDCVGLKPSFSMIEKVISLYWDMGKK 205

Query: 1137 ESGVLFVKDVLSRGIAYTVDDEENNKGGPTGYLAWKMMVDGNYLGAVKLVIDFRESGLKP 958
            E  V FVK+VL RGIAY+ DD E  KGGPTGYL WKMMVDGNY  AVKLVI  RESGLKP
Sbjct: 206  EGAVSFVKEVLRRGIAYSGDDGEGQKGGPTGYLTWKMMVDGNYRNAVKLVIHLRESGLKP 265

Query: 957  EVYSYLIAMTAIVKELNEFSKAFRKLKGFVKAGSIPELDAENVWLIENYQSDLLSDGVRL 778
            E+Y+YLIAMTA+VKELNEFSKA RKLKG+ ++G + ELDAENV L+E YQSDLL+DGV L
Sbjct: 266  EIYAYLIAMTAVVKELNEFSKALRKLKGYSRSGMVTELDAENVELVEKYQSDLLADGVCL 325

Query: 777  SQWVIEEGSSLNSAVVHERLLAMYICAGEGLKAEQQLWEMKLIGKEPERELYDIVLAICA 598
            S WVI+EGS     VVHERLLAMYICAG GL AE+QLWEMKL+GKE + +LYDIVLAICA
Sbjct: 326  SSWVIQEGSPALYGVVHERLLAMYICAGRGLDAERQLWEMKLVGKEADGDLYDIVLAICA 385

Query: 597  SQNEANSVSRLLTGLEVTNSIRRKKTLSWLLRGYVKGGHFQDASKTIIKMLDIGLHPEYL 418
            SQ EA++V+RLLT +EV +S+R+KK+LSWLLRGY+KGGH+ +A++T+IKMLD+GL P+YL
Sbjct: 386  SQKEASAVARLLTRIEVASSMRKKKSLSWLLRGYIKGGHYGEAAETLIKMLDLGLSPDYL 445

Query: 417  DRAAVLQGLRKAIQDTGSVEPYLSLCKYLSDADLIGPCLVYFYVDRYKLWVIKMV 253
            DR AV+QGLRK IQ  G+VE YL LCK LSD +LIGP LVY Y+ +YKLW++K++
Sbjct: 446  DRVAVMQGLRKRIQQWGNVESYLKLCKRLSDVNLIGPSLVYLYIKKYKLWIMKLL 500


>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
            gi|223539607|gb|EEF41193.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 499

 Score =  643 bits (1659), Expect = 0.0
 Identities = 318/445 (71%), Positives = 371/445 (83%)
 Frame = -1

Query: 1587 KKNEFRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEEMNNKLSSRELQ 1408
            +  EFR   + ELD+++ SD+++EM EGFFEAIEELERM REP+DVLEEMN+KLS+RELQ
Sbjct: 55   RNREFRVLKSVELDQYIASDDEEEMSEGFFEAIEELERMTREPSDVLEEMNDKLSARELQ 114

Query: 1407 LVLVYFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLIEGEHSXXXXXX 1228
            LVLVYFSQEGRDSWCALEVFEWL+KEN+VDKETMELMVSIMC W++KLIEGEH       
Sbjct: 115  LVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWIKKLIEGEHEIGDVVD 174

Query: 1227 XXXXXXXXXLKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTVDDEENNKGGPT 1048
                     LKPSFSMIEKVISLYWE+G+KE  V FVK+VL R +AY  DD E  KGGPT
Sbjct: 175  LLVDMDCVGLKPSFSMIEKVISLYWEIGEKEKSVSFVKEVLRREVAYFEDDGEGQKGGPT 234

Query: 1047 GYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEFSKAFRKLKGFV 868
            GYLAWKMMVDGNY  AVKLVI FRESGLKPEVYSYLIAMTA+VKELNEF+KA RKLKGF 
Sbjct: 235  GYLAWKMMVDGNYRDAVKLVIHFRESGLKPEVYSYLIAMTAVVKELNEFAKALRKLKGFA 294

Query: 867  KAGSIPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHERLLAMYICAGEG 688
            K+G I ELDAEN  LIE YQSDL++DGV LS WVI+EGS     VVHERLLAMYICAG G
Sbjct: 295  KSGLIAELDAENTRLIEKYQSDLIADGVCLSSWVIQEGSPSLYGVVHERLLAMYICAGRG 354

Query: 687  LKAEQQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTNSIRRKKTLSWL 508
            L AE+QLWEMKL+GK  + +LYDIVLAICASQ EA++VSRLLT +EVT+S+++KKTLSWL
Sbjct: 355  LDAERQLWEMKLVGKHADGDLYDIVLAICASQKEASAVSRLLTRVEVTSSLQKKKTLSWL 414

Query: 507  LRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSVEPYLSLCKYLS 328
            LRGY+KGG + +A++ ++KMLD+GL P+YLDR AVLQGLRK IQ  G+VE YL+LCK LS
Sbjct: 415  LRGYLKGGQYDEAAEALVKMLDMGLCPDYLDRVAVLQGLRKRIQQWGNVESYLNLCKRLS 474

Query: 327  DADLIGPCLVYFYVDRYKLWVIKMV 253
            D +LIGP LVY Y+ +YKLW++KM+
Sbjct: 475  DENLIGPSLVYLYIKKYKLWIMKML 499


>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
            chloroplastic-like [Glycine max]
          Length = 508

 Score =  625 bits (1612), Expect = e-176
 Identities = 301/441 (68%), Positives = 372/441 (84%)
 Frame = -1

Query: 1575 FRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEEMNNKLSSRELQLVLV 1396
            FR+  + E+D+++TS+  DEM +GFFEAIEELERM REP+DVLEEMN++LS+RELQLVLV
Sbjct: 70   FRALKSVEMDQYVTSN--DEMSDGFFEAIEELERMTREPSDVLEEMNDRLSARELQLVLV 127

Query: 1395 YFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLIEGEHSXXXXXXXXXX 1216
            YFSQ+GRDSWCALEVF+WL+KEN+VDKETMELMV+IMCGWV+KLI+ +H           
Sbjct: 128  YFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQQQHGVGDVVDLLVD 187

Query: 1215 XXXXXLKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTVDDEENNKGGPTGYLA 1036
                 L+P FSMIEKVISLYWEMG+KE  VLFV++VL RGI Y  +DEE +KGGPTGYLA
Sbjct: 188  MDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRGIPYVEEDEEGHKGGPTGYLA 247

Query: 1035 WKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEFSKAFRKLKGFVKAGS 856
            WKMM +G+Y  AV+LVI FRESGLKPE+YSYL+AMTA+VKELNEF+KA RKLKGF +AG 
Sbjct: 248  WKMMAEGDYRNAVRLVIRFRESGLKPEIYSYLVAMTAVVKELNEFAKALRKLKGFTRAGL 307

Query: 855  IPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHERLLAMYICAGEGLKAE 676
            + ELD E+V L E YQSD L+DGVRLS WVI++GS     +VHERLLAMYICAG G++AE
Sbjct: 308  VAELDLEDVELTEKYQSDTLADGVRLSNWVIQDGSPSLHGIVHERLLAMYICAGHGIEAE 367

Query: 675  QQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTNSIRRKKTLSWLLRGY 496
            +QLWEMKL+GKE + +LYDIVLAICASQ E+N+ +RLLT LEV +S ++KK+LSWLLRGY
Sbjct: 368  RQLWEMKLVGKEADGDLYDIVLAICASQKESNATARLLTRLEVVSSPQKKKSLSWLLRGY 427

Query: 495  VKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSVEPYLSLCKYLSDADL 316
            +KGGHF +A++TI+KML++G +PEYLDRAAVLQGLRK IQ  G+++ Y+ LCK LSDA+L
Sbjct: 428  IKGGHFNEAAETIMKMLELGFYPEYLDRAAVLQGLRKRIQQYGNLDTYVRLCKSLSDANL 487

Query: 315  IGPCLVYFYVDRYKLWVIKMV 253
            IGPCLV+ Y+ +YKLWV+KM+
Sbjct: 488  IGPCLVHLYIRKYKLWVVKML 508


>ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g30100, chloroplastic-like [Cucumis sativus]
          Length = 501

 Score =  622 bits (1603), Expect = e-175
 Identities = 298/445 (66%), Positives = 369/445 (82%)
 Frame = -1

Query: 1587 KKNEFRSFGATELDRFLTSDEKDEMGEGFFEAIEELERMVREPADVLEEMNNKLSSRELQ 1408
            K  + R F + ELD+F+TSD++DEMG+GFFEAIEELERM REP+DVLEEMN++LS+RE+Q
Sbjct: 57   KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQ 116

Query: 1407 LVLVYFSQEGRDSWCALEVFEWLQKENKVDKETMELMVSIMCGWVRKLIEGEHSXXXXXX 1228
            LVLVYFSQEGRDSWCALEVFEWLQKEN+VDKETMELMVSIMC W++KL+EG H+      
Sbjct: 117  LVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNVGDVVD 176

Query: 1227 XXXXXXXXXLKPSFSMIEKVISLYWEMGKKESGVLFVKDVLSRGIAYTVDDEENNKGGPT 1048
                     LKP FSMIEKVISLYWEMG+KE  V FVK+VL R +A+  DD E +KGGP+
Sbjct: 177  LLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGRNLAFMKDDWEGHKGGPS 236

Query: 1047 GYLAWKMMVDGNYLGAVKLVIDFRESGLKPEVYSYLIAMTAIVKELNEFSKAFRKLKGFV 868
            GYLAWKMMVDG+Y GAVK+V+  RESGL+PEVYSYLIAMTA+VKELNEF+KA RKLKG+ 
Sbjct: 237  GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKGYA 296

Query: 867  KAGSIPELDAENVWLIENYQSDLLSDGVRLSQWVIEEGSSLNSAVVHERLLAMYICAGEG 688
            + G + ELD  NV L+  YQ++LL+DGV+LS WV+EEGSS    VVHERLLAMYICAG+G
Sbjct: 297  RDGFVAELDKNNVELVAKYQTELLADGVQLSNWVLEEGSSSIRGVVHERLLAMYICAGQG 356

Query: 687  LKAEQQLWEMKLIGKEPERELYDIVLAICASQNEANSVSRLLTGLEVTNSIRRKKTLSWL 508
            ++AE+QLWEMKL+GKE + +LYDIVLAICASQ E  ++ RLLT +E+T+ + +KK+L+WL
Sbjct: 357  VEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMIKKKSLTWL 416

Query: 507  LRGYVKGGHFQDASKTIIKMLDIGLHPEYLDRAAVLQGLRKAIQDTGSVEPYLSLCKYLS 328
            LRGY+KGGHF+DA+ T++KM+++G  PEYLDR AVLQGL K I++  SV  YL LCK LS
Sbjct: 417  LRGYIKGGHFRDAAGTLVKMINLGFLPEYLDRVAVLQGLXKEIREPESVHTYLDLCKCLS 476

Query: 327  DADLIGPCLVYFYVDRYKLWVIKMV 253
            DA+LIGP LVY ++ ++KLW+IKM+
Sbjct: 477  DANLIGPSLVYLHLQKHKLWIIKML 501