BLASTX nr result
ID: Coptis25_contig00002364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002364
(490 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichoca... 96 3e-18
ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trich... 94 1e-17
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich... 93 2e-17
ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trich... 93 2e-17
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-17
>ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222844656|gb|EEE82203.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1088
Score = 95.9 bits (237), Expect = 3e-18
Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
Frame = -2
Query: 489 LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTILFIWNCGGLE 313
L I G D+V LP+ L+N T L+ LEI L+ L L+NLS + L IW CG LE
Sbjct: 903 LHIAGIDDVRELPDGFLQNHTLLESLEIGGMPDLESLSNRVLDNLSALKSLSIWGCGKLE 962
Query: 312 SLTE-GLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLI 136
SL E GLR L SL+ L + C L LK+ C + ++ +HL
Sbjct: 963 SLPEEGLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSLTEGVRHLT 1022
Query: 135 SLEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRK 19
+LE ++L +L SLPE IQH+ LQ+L I GC NL+K
Sbjct: 1023 ALEDLELGNCPELNSLPESIQHLTSLQSLFISGCPNLKK 1061
>ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222839627|gb|EEE77950.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1052
Score = 94.0 bits (232), Expect = 1e-17
Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Frame = -2
Query: 489 LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTILFIWNCGGLE 313
LRI E+E+LPE LR+LT L+VLEI+ C +L LP L LS++ L I C
Sbjct: 869 LRIESCYELESLPEEGLRHLTSLEVLEIWSCRRLNSLPMNGLCGLSSLRHLSIHYCNQFA 928
Query: 312 SLTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLIS 133
SL+EG++ LT+L++L L CPEL + QHL S
Sbjct: 929 SLSEGVQHLTALEDL-------------------------NLSHCPELNSLPESIQHLSS 963
Query: 132 LEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
L + + + + LTSLP++I ++ L +L IRGC NL P+
Sbjct: 964 LRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLVSFPD 1004
>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1091
Score = 93.2 bits (230), Expect = 2e-17
Identities = 60/160 (37%), Positives = 82/160 (51%)
Frame = -2
Query: 489 LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTELENLSTVTILFIWNCGGLES 310
L IT DE+E+LPE LRNL L+VL I C +L LP + LS++ L I C S
Sbjct: 911 LSITACDELESLPEEGLRNLNSLEVLSINGCGRLNSLP--MNCLSSLRRLSIKYCDQFAS 968
Query: 309 LTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLISL 130
L+EG+R LT+L++L L CPEL + QHL SL
Sbjct: 969 LSEGVRHLTALEDL-------------------------SLFGCPELNSLPESIQHLTSL 1003
Query: 129 EYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
+ + + LTSLP +I ++ L +L+IRGC NL P+
Sbjct: 1004 RSLSIWYCKGLTSLPYQIGYLTSLSSLKIRGCPNLMSFPD 1043
Score = 74.7 bits (182), Expect = 7e-12
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Frame = -2
Query: 489 LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTILFIWNCGGLE 313
L I+ + LP+ L+N T L+ L+I + ++ L L+NLS++ L I C LE
Sbjct: 861 LNISKSSNMMELPDGFLQNHTLLEYLQINELRNMQSLSNNVLDNLSSLKTLSITACDELE 920
Query: 312 SL-TEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLI 136
SL EGLR L SL+ L + C L L + C + +S +HL
Sbjct: 921 SLPEEGLRNLNSLEVLSINGCGRLN---SLPMNCLSSLRRLSIKYCDQFASLSEGVRHLT 977
Query: 135 SLEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLP 13
+LE + L +L SLPE IQH+ L++L I CK L LP
Sbjct: 978 ALEDLSLFGCPELNSLPESIQHLTSLRSLSIWYCKGLTSLP 1018
>ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222844683|gb|EEE82230.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1085
Score = 93.2 bits (230), Expect = 2e-17
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Frame = -2
Query: 489 LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLP-TELENLSTVTILFIWNCGGLE 313
L I G +E+E++PE L+NLT L++LEI C +L LP EL +LS++ L I C
Sbjct: 902 LTIQGCNELESIPEEGLQNLTSLEILEILSCKRLNSLPMNELCSLSSLRHLSIHFCDQFA 961
Query: 312 SLTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLIS 133
SL+EG+R LT+L++L L C EL + QH+ S
Sbjct: 962 SLSEGVRHLTALEDL-------------------------SLFGCHELNSLPESIQHITS 996
Query: 132 LEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
L + + + + LTSLP++I ++ L +L IRGC NL P+
Sbjct: 997 LRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCPNLVSFPD 1037
>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
predicted protein [Populus trichocarpa]
Length = 481
Score = 92.4 bits (228), Expect = 3e-17
Identities = 61/160 (38%), Positives = 81/160 (50%)
Frame = -2
Query: 489 LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTELENLSTVTILFIWNCGGLES 310
LRI GFDE+ LP+ L+N T LQ L L+ L +L NLS++ L C LES
Sbjct: 273 LRIEGFDELAVLPDGLLQNHTCLQSLTFGSMGSLRSLSNQLNNLSSLKSLGFLFCDKLES 332
Query: 309 LTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLISL 130
L EG++ L SL+ L + ++ L + C EL +S QHL +L
Sbjct: 333 LPEGVQNLNSLEMLGI---CAMMPKMTTLPGLPSSLAELHIVGCLELTSISEGLQHLTAL 389
Query: 129 EYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
+ + L +L SLPE IQH+ L L I GC NL LPE
Sbjct: 390 KDLYLAGCVKLNSLPENIQHLTSLSRLRIHGCSNLMSLPE 429