BLASTX nr result

ID: Coptis25_contig00002364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002364
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichoca...    96   3e-18
ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trich...    94   1e-17
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich...    93   2e-17
ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trich...    93   2e-17
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844656|gb|EEE82203.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1088

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 64/159 (40%), Positives = 85/159 (53%), Gaps = 2/159 (1%)
 Frame = -2

Query: 489  LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTILFIWNCGGLE 313
            L I G D+V  LP+  L+N T L+ LEI     L+ L    L+NLS +  L IW CG LE
Sbjct: 903  LHIAGIDDVRELPDGFLQNHTLLESLEIGGMPDLESLSNRVLDNLSALKSLSIWGCGKLE 962

Query: 312  SLTE-GLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLI 136
            SL E GLR L SL+ L +  C  L                LK+  C +   ++   +HL 
Sbjct: 963  SLPEEGLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSLTEGVRHLT 1022

Query: 135  SLEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRK 19
            +LE ++L    +L SLPE IQH+  LQ+L I GC NL+K
Sbjct: 1023 ALEDLELGNCPELNSLPESIQHLTSLQSLFISGCPNLKK 1061


>ref|XP_002336038.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839627|gb|EEE77950.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1052

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
 Frame = -2

Query: 489  LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTILFIWNCGGLE 313
            LRI    E+E+LPE  LR+LT L+VLEI+ C +L  LP   L  LS++  L I  C    
Sbjct: 869  LRIESCYELESLPEEGLRHLTSLEVLEIWSCRRLNSLPMNGLCGLSSLRHLSIHYCNQFA 928

Query: 312  SLTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLIS 133
            SL+EG++ LT+L++L                          L  CPEL  +    QHL S
Sbjct: 929  SLSEGVQHLTALEDL-------------------------NLSHCPELNSLPESIQHLSS 963

Query: 132  LEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
            L  + + + + LTSLP++I ++  L +L IRGC NL   P+
Sbjct: 964  LRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCSNLVSFPD 1004


>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1091

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 60/160 (37%), Positives = 82/160 (51%)
 Frame = -2

Query: 489  LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTELENLSTVTILFIWNCGGLES 310
            L IT  DE+E+LPE  LRNL  L+VL I  C +L  LP  +  LS++  L I  C    S
Sbjct: 911  LSITACDELESLPEEGLRNLNSLEVLSINGCGRLNSLP--MNCLSSLRRLSIKYCDQFAS 968

Query: 309  LTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLISL 130
            L+EG+R LT+L++L                          L  CPEL  +    QHL SL
Sbjct: 969  LSEGVRHLTALEDL-------------------------SLFGCPELNSLPESIQHLTSL 1003

Query: 129  EYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
              + + +   LTSLP +I ++  L +L+IRGC NL   P+
Sbjct: 1004 RSLSIWYCKGLTSLPYQIGYLTSLSSLKIRGCPNLMSFPD 1043



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
 Frame = -2

Query: 489  LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTE-LENLSTVTILFIWNCGGLE 313
            L I+    +  LP+  L+N T L+ L+I +   ++ L    L+NLS++  L I  C  LE
Sbjct: 861  LNISKSSNMMELPDGFLQNHTLLEYLQINELRNMQSLSNNVLDNLSSLKTLSITACDELE 920

Query: 312  SL-TEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLI 136
            SL  EGLR L SL+ L +  C  L                L +  C +   +S   +HL 
Sbjct: 921  SLPEEGLRNLNSLEVLSINGCGRLN---SLPMNCLSSLRRLSIKYCDQFASLSEGVRHLT 977

Query: 135  SLEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLP 13
            +LE + L    +L SLPE IQH+  L++L I  CK L  LP
Sbjct: 978  ALEDLSLFGCPELNSLPESIQHLTSLRSLSIWYCKGLTSLP 1018


>ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844683|gb|EEE82230.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1085

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
 Frame = -2

Query: 489  LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLP-TELENLSTVTILFIWNCGGLE 313
            L I G +E+E++PE  L+NLT L++LEI  C +L  LP  EL +LS++  L I  C    
Sbjct: 902  LTIQGCNELESIPEEGLQNLTSLEILEILSCKRLNSLPMNELCSLSSLRHLSIHFCDQFA 961

Query: 312  SLTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLIS 133
            SL+EG+R LT+L++L                          L  C EL  +    QH+ S
Sbjct: 962  SLSEGVRHLTALEDL-------------------------SLFGCHELNSLPESIQHITS 996

Query: 132  LEYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
            L  + + + + LTSLP++I ++  L +L IRGC NL   P+
Sbjct: 997  LRSLSIQYCTGLTSLPDQIGYLTSLSSLNIRGCPNLVSFPD 1037


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 61/160 (38%), Positives = 81/160 (50%)
 Frame = -2

Query: 489 LRITGFDEVETLPEAPLRNLTRLQVLEIYDCDKLKRLPTELENLSTVTILFIWNCGGLES 310
           LRI GFDE+  LP+  L+N T LQ L       L+ L  +L NLS++  L    C  LES
Sbjct: 273 LRIEGFDELAVLPDGLLQNHTCLQSLTFGSMGSLRSLSNQLNNLSSLKSLGFLFCDKLES 332

Query: 309 LTEGLRKLTSLKELVVKDCWSLKXXXXXXXXXXXXXXXLKLCSCPELEVMSVDFQHLISL 130
           L EG++ L SL+ L +    ++                L +  C EL  +S   QHL +L
Sbjct: 333 LPEGVQNLNSLEMLGI---CAMMPKMTTLPGLPSSLAELHIVGCLELTSISEGLQHLTAL 389

Query: 129 EYIQLVWLSQLTSLPEEIQHVRRLQTLEIRGCKNLRKLPE 10
           + + L    +L SLPE IQH+  L  L I GC NL  LPE
Sbjct: 390 KDLYLAGCVKLNSLPENIQHLTSLSRLRIHGCSNLMSLPE 429


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