BLASTX nr result

ID: Coptis25_contig00002363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002363
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62110.1| hypothetical protein VITISV_038734 [Vitis vinifera]    55   8e-06

>emb|CAN62110.1| hypothetical protein VITISV_038734 [Vitis vinifera]
          Length = 1625

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
 Frame = -1

Query: 203  CGSLKSLSESSLQHLTALQKLDIWNCPELE-IMSVDFQHLISLQYLWLRWLPQLTSLPE- 30
            C  L+SL+E+ LQHLT+L+KL+I NCP L+ +  V  QHL SL+ L +     L SL E 
Sbjct: 1249 CSRLQSLTEAGLQHLTSLEKLEIANCPMLQSLTKVGLQHLTSLKTLGINNCRMLQSLTEV 1308

Query: 29   EIQHARRLQ 3
             +QH   L+
Sbjct: 1309 GLQHLTSLE 1317



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = -1

Query: 209  ANCGSLKSLSESSLQHLTALQKLDIWNCPELE-IMSVDFQHLISLQYLWLRWLPQLTSLP 33
            ANC  L+SL++  LQHLT+L+ L I NC  L+ +  V  QHL SL+ LW+   P L SL 
Sbjct: 1272 ANCPMLQSLTKVGLQHLTSLKTLGINNCRMLQSLTEVGLQHLTSLESLWINNCPMLQSLT 1331

Query: 32   E-EIQHARRLQ 3
            +  +QH   L+
Sbjct: 1332 KVGLQHLTSLE 1342



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = -1

Query: 206  NCGSLKSLSESSLQHLTALQKLDIWNCPELE-IMSVDFQHLISLQYLWLRWLPQLTSLPE 30
            NC  L+SL+E  LQHLT+L+ L I NCP L+ +  V  QHL SL+ LW+     L SL +
Sbjct: 1298 NCRMLQSLTEVGLQHLTSLESLWINNCPMLQSLTKVGLQHLTSLESLWINKCXMLQSLTK 1357

Query: 29   -EIQHARRLQ 3
              +QH   L+
Sbjct: 1358 VGLQHLTSLK 1367


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