BLASTX nr result
ID: Coptis25_contig00002354
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002354
(1650 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin... 726 0.0
ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2... 706 0.0
ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|2... 706 0.0
ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containin... 701 0.0
gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum] 689 0.0
>ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Vitis
vinifera]
Length = 474
Score = 726 bits (1874), Expect = 0.0
Identities = 354/406 (87%), Positives = 375/406 (92%), Gaps = 2/406 (0%)
Frame = -1
Query: 1479 MAHRLLRDPEADGWERSDFPIICESCLGDNPYLRMTKANFDKECKICTRPFTVFRWRPGR 1300
MAHRLLRD EADGWERSDFPIICESCLGDNPY+RMTKA++DKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
Query: 1299 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDSIPRSDVNREYFAE 1120
DAR+KKTE+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61 DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120
Query: 1119 EHDRRARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYR 940
EHDRRARAGIDYESSFGK RPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYR
Sbjct: 121 EHDRRARAGIDYESSFGKVRPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYR 180
Query: 939 HEMPITGELSQQNIKDRYYGNNDPVAMKLLNKAGEMPSLMPPDDESIKTLYVGGLDDRIT 760
HEMPITGELSQQNIKDRYYG NDPVA+KLLNKAGEMPSL PP+DESIKTLYVGGLD R+T
Sbjct: 181 HEMPITGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGLDARVT 240
Query: 759 EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLLWGR 580
EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKL+WGR
Sbjct: 241 EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300
Query: 579 SQIAKAELENHDDEAARQQALAHGAMLPRAVISQQHSQHIQLPGTLEQ-PPPMHYFNIPP 403
Q K E E+ +EA +Q ALAHG MLPRAVISQQ +Q IQ PGT +Q PPPMHYFNIPP
Sbjct: 301 PQAPKPEGES-SEEARQQAALAHGGMLPRAVISQQQNQVIQPPGTQDQPPPPMHYFNIPP 359
Query: 402 PP-LERGYYPSMDPQRMGALVPSQEGTGNAPSGSGENKSGSDKQPQ 268
PP ER +YPSMDPQRMGALVPSQEG + +G ENK+GSDKQ Q
Sbjct: 360 PPQQERTFYPSMDPQRMGALVPSQEGAPSGSAGPSENKAGSDKQQQ 405
>ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1|
predicted protein [Populus trichocarpa]
Length = 531
Score = 706 bits (1823), Expect = 0.0
Identities = 340/403 (84%), Positives = 369/403 (91%), Gaps = 1/403 (0%)
Frame = -1
Query: 1479 MAHRLLRDPEADGWERSDFPIICESCLGDNPYLRMTKANFDKECKICTRPFTVFRWRPGR 1300
MAHRLL+DPEADGWERSDFPIICESCLGDNPY+RMT+A+FDKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLKDPEADGWERSDFPIICESCLGDNPYVRMTRADFDKECKICTRPFTVFRWRPGR 60
Query: 1299 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDSIPRSDVNREYFAE 1120
DAR+KKTE+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61 DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120
Query: 1119 EHDRRARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYR 940
EHDRRARAGIDYESS+GKA+ NDTILKLQRTTPYYKRNRAHVCSF+ RGECTRGAECPYR
Sbjct: 121 EHDRRARAGIDYESSYGKAQANDTILKLQRTTPYYKRNRAHVCSFFARGECTRGAECPYR 180
Query: 939 HEMPITGELSQQNIKDRYYGNNDPVAMKLLNKAGEMPSLMPPDDESIKTLYVGGLDDRIT 760
HEMPITGELSQQNIKDRYYG NDPVAMKLLNKAG+MPSL PP+DESIKTLYVGGLD RI
Sbjct: 181 HEMPITGELSQQNIKDRYYGVNDPVAMKLLNKAGDMPSLEPPEDESIKTLYVGGLDARIN 240
Query: 759 EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLLWGR 580
EQDLRD FYAHGEIES++MV QRA AFVTYTTREGAEKAA ELSN+LVIKGLRLKL+WGR
Sbjct: 241 EQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSNRLVIKGLRLKLMWGR 300
Query: 579 SQIAKAELENHDDEAARQQALAHGAMLPRAVISQQHSQHIQLPGTLEQPPPMHYFNIPPP 400
Q K E E+ DEA +Q A+AH MLPRAV+SQQH+ H+ PGT +Q PPMHYFNIPPP
Sbjct: 301 PQAPKPESES-SDEARQQAAMAHSGMLPRAVVSQQHN-HLNPPGTQDQHPPMHYFNIPPP 358
Query: 399 P-LERGYYPSMDPQRMGALVPSQEGTGNAPSGSGENKSGSDKQ 274
P ER +YPSMDPQRMGALV SQ+GT N P+GSGENKSG +KQ
Sbjct: 359 PQQERAFYPSMDPQRMGALVGSQDGTPNGPAGSGENKSGLEKQ 401
>ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|222850535|gb|EEE88082.1|
predicted protein [Populus trichocarpa]
Length = 531
Score = 706 bits (1823), Expect = 0.0
Identities = 340/403 (84%), Positives = 369/403 (91%), Gaps = 1/403 (0%)
Frame = -1
Query: 1479 MAHRLLRDPEADGWERSDFPIICESCLGDNPYLRMTKANFDKECKICTRPFTVFRWRPGR 1300
MAHRLL+DPEADGWERSDFPIICESCLGDNPY+RMT+A+FDKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLKDPEADGWERSDFPIICESCLGDNPYVRMTRADFDKECKICTRPFTVFRWRPGR 60
Query: 1299 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDSIPRSDVNREYFAE 1120
DAR+KKTE+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61 DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120
Query: 1119 EHDRRARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYR 940
EHDRRARAGIDYESS+GKA+ NDTILKLQRTTPYYKRNRAHVCSF+ RGECTRGAECPYR
Sbjct: 121 EHDRRARAGIDYESSYGKAQANDTILKLQRTTPYYKRNRAHVCSFFARGECTRGAECPYR 180
Query: 939 HEMPITGELSQQNIKDRYYGNNDPVAMKLLNKAGEMPSLMPPDDESIKTLYVGGLDDRIT 760
HEMPITGELSQQNIKDRYYG NDPVAMKLLNKAG+MPSL PP+DESIKTLYVGGLD RI
Sbjct: 181 HEMPITGELSQQNIKDRYYGVNDPVAMKLLNKAGDMPSLEPPEDESIKTLYVGGLDARIN 240
Query: 759 EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLLWGR 580
EQDLRD FYAHGEIES++MV QRA AFVTYTTREGAEKAA ELSN+LVIKGLRLKL+WGR
Sbjct: 241 EQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSNRLVIKGLRLKLMWGR 300
Query: 579 SQIAKAELENHDDEAARQQALAHGAMLPRAVISQQHSQHIQLPGTLEQPPPMHYFNIPPP 400
Q K E E+ DEA +Q A+AH MLPRAV+SQQH+ H+ PGT +Q PPMHYFNIPPP
Sbjct: 301 PQAPKPESES-SDEARQQAAMAHSGMLPRAVVSQQHN-HLNPPGTQDQHPPMHYFNIPPP 358
Query: 399 P-LERGYYPSMDPQRMGALVPSQEGTGNAPSGSGENKSGSDKQ 274
P ER +YPSMDPQRMGALV SQ+GT N P+GSGENKSG +KQ
Sbjct: 359 PQQERAFYPSMDPQRMGALVGSQDGTPNGPAGSGENKSGLEKQ 401
>ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus] gi|449525922|ref|XP_004169965.1|
PREDICTED: zinc finger CCCH domain-containing protein
40-like [Cucumis sativus]
Length = 517
Score = 701 bits (1809), Expect = 0.0
Identities = 358/499 (71%), Positives = 392/499 (78%), Gaps = 6/499 (1%)
Frame = -1
Query: 1479 MAHRLLRDPEADGWERSDFPIICESCLGDNPYLRMTKANFDKECKICTRPFTVFRWRPGR 1300
MAHRLLRD EADGWERSDFPIICESCLGDNPY+RMTKA++DKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
Query: 1299 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDSIPRSDVNREYFAE 1120
DARYKKTEICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120
Query: 1119 EHDRRARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYR 940
EHDR+ARAGIDYESS+GKARPNDTILKLQRTTPYYKRNRAHVCSFY+RGECTRG+ECPYR
Sbjct: 121 EHDRKARAGIDYESSYGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGSECPYR 180
Query: 939 HEMPITGELSQQNIKDRYYGNNDPVAMKLLNKAGEMPSLMPPDDESIKTLYVGGLDDRIT 760
HEMP TGELSQQNIKDRYYG NDPVA+KLLNKAGEMPSL PP+DESI+TLYVGGLD R++
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIRTLYVGGLDARVS 240
Query: 759 EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLLWGR 580
EQDLRD+FYAHGEIES+RMVLQRACAFVTYTTREGAEKAAEELSNKLVI+GLRLKL+WGR
Sbjct: 241 EQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELSNKLVIRGLRLKLMWGR 300
Query: 579 SQIAKAELENHDDEAARQQALAHGAMLPRAVISQQHSQHIQLPGTLEQPPPMHYFNIPPP 400
Q KAE+E D+ A+Q A+AH MLPRAVISQQH+Q + PGT +QP MHYFNIPPP
Sbjct: 301 PQAPKAEIEGSDE--AKQAAVAHSGMLPRAVISQQHNQ-LHPPGTHDQPQAMHYFNIPPP 357
Query: 399 P--LERGYYPSMDPQRMGALVPSQEG--TGNAPSGSGENKSGSDKQPQVFXXXXXXXXXX 232
P ER +YPSMDPQRMGALV + + N P+GS E + GSDKQ Q
Sbjct: 358 PPQQERAFYPSMDPQRMGALVSTHDAGMPPNGPTGSTEARPGSDKQHQ------------ 405
Query: 231 XXXXXXXXXXXXXXXXXXXXXXXXXXHAMRPPAP-HPTTHLYPAGAP-GSSQNRPSGTPS 58
H M PP P YP P G Q+ P P
Sbjct: 406 ---------------HQHQQGHQFPYHPMHPPPPAQYQQQFYPPPPPYGYVQHYPPYPPY 450
Query: 57 SSENPPSGAPSSSQNPPSG 1
S PP + +PPSG
Sbjct: 451 HSGMPPPPQSQTQPHPPSG 469
>gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 689 bits (1777), Expect = 0.0
Identities = 333/405 (82%), Positives = 363/405 (89%), Gaps = 3/405 (0%)
Frame = -1
Query: 1479 MAHRLLRDPEADGWERSDFPIICESCLGDNPYLRMTKANFDKECKICTRPFTVFRWRPGR 1300
MAHRLLRD EADGWERSDFPIICESCLGD+PY+RMTKA++DKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
Query: 1299 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDSIPRSDVNREYFAE 1120
DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE 120
Query: 1119 EHDRRARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYR 940
EHDRRARAGIDYESS+GK R NDTI+KLQRTTPYYKRNRAHVCSFY+RG+CTRG ECPYR
Sbjct: 121 EHDRRARAGIDYESSYGKVRANDTIMKLQRTTPYYKRNRAHVCSFYIRGQCTRGLECPYR 180
Query: 939 HEMPITGELSQQNIKDRYYGNNDPVAMKLLNKAGEMPSLMPPDDESIKTLYVGGLDDRIT 760
HEMP TGELSQQNIKDRYYG NDPVA+KLLNKAGEMPSL PPDDESI+TLYVGG+D RIT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPDDESIRTLYVGGVDARIT 240
Query: 759 EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLLWGR 580
EQDLRDHFYAHGEIES++MV+QR CAFVTYTTREGA KAAEEL+NKLVIKGLRLKLLWGR
Sbjct: 241 EQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTREGAVKAAEELANKLVIKGLRLKLLWGR 300
Query: 579 SQIAKAELENHDDEAARQQALAHGAMLPRAVISQQHSQHIQLPGTLEQPPPMHYFNIPP- 403
Q+ K E E DEA +Q AL H +LPRAV+SQQ +Q +Q PGT +QPP M YFNIPP
Sbjct: 301 PQVPKPESE-VSDEARQQAALTHSGLLPRAVVSQQQNQPLQPPGTQDQPPSMPYFNIPPM 359
Query: 402 PPLERGYYPSMDPQRMGALVPSQEG--TGNAPSGSGENKSGSDKQ 274
P +R YYPSMDPQRMGA++ SQEG + A SG GENK GSD Q
Sbjct: 360 PQQDRPYYPSMDPQRMGAVIASQEGASSSTAGSGPGENKIGSDHQ 404