BLASTX nr result
ID: Coptis25_contig00002353
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002353 (1040 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27434.3| unnamed protein product [Vitis vinifera] 65 4e-08 ref|XP_003540862.1| PREDICTED: putative F-box/FBD/LRR-repeat pro... 61 4e-07 ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g... 61 4e-07 ref|XP_003636673.1| F-box family protein [Medicago truncatula] g... 58 3e-06 ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 57 1e-05 >emb|CBI27434.3| unnamed protein product [Vitis vinifera] Length = 452 Score = 64.7 bits (156), Expect = 4e-08 Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 5/172 (2%) Frame = +1 Query: 115 KILSGLHNVKKLSFEGSFVELVTRD---RELPTLQACCSLKHLQLNMHATKNQVQAITLL 285 KI L V+KL EG F+E + + LP L + HL + +++ L Sbjct: 285 KIGRSLPAVEKLYLEGYFLEFLALGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCL 344 Query: 286 LRIYPNLQTLDILCYQGASPSSNKLNMEEYWRTEELSTRDVLKRLKEVQIRLHKGAEIEL 465 + PNL+ L ++ Y G + + EY+ T+ LS LKRL++V++ E EL Sbjct: 345 ITSSPNLEELRVVAYAG---DIARDAVVEYFGTQNLSHHS-LKRLQKVKMEEISNFEPEL 400 Query: 466 DLVRYLLGSADNLEKMSIKFLGD--NENRMRISMKLLTFTRVSPNAAIFFLQ 615 + ++++L S+ +LE+M + D E+ ++ +L+ F R SP A + +LQ Sbjct: 401 EFIKFILASSPSLEEMEVLRSEDTVGEDERKMWKELMRFRRASPKAEVIYLQ 452 >ref|XP_003540862.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220-like [Glycine max] Length = 510 Score = 61.2 bits (147), Expect = 4e-07 Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 24/216 (11%) Frame = +1 Query: 34 SIARIGLFPPSTSSNDANNEFC----DNYARKI------LSGLHNVKKLSFEGSFVELVT 183 +I + +F PS N+ F DN K+ LSGL + + LS E +E+++ Sbjct: 296 AITDMTMFGPSNLLNEVTVGFYVFTRDNILGKLQSAIDLLSGLSHARSLSLERQTIEILS 355 Query: 184 RDRELPTLQACCSLKHLQLNMHATKNQVQAITLLLRIYPNLQTLDILCYQGASPSSNKLN 363 + L Q +LKHL+L+ K+ V +T L + P L TL + + N Sbjct: 356 NNHLL--FQPFYNLKHLELHTGFNKSDVPGLTCLFKSSPTLDTLILKIIHEYRIERKEWN 413 Query: 364 M----------EEYWRTEELSTRDVLKRLKEVQIRLHKGAEIELDLVRYLLGSADNLEKM 513 E+YW ++ + L+ LK V+I E E+ L ++LL LE+M Sbjct: 414 RDLWDMTITEGEQYWESQIRTLESFLQHLKVVKIHGFLDYENEVALAKFLLKHGKALEEM 473 Query: 514 SIKF----LGDNENRMRISMKLLTFTRVSPNAAIFF 609 + D R +I +++ F+ S NA + F Sbjct: 474 ILHTGHCNARDTLRRQKIRSQMMGFSWASSNAKVAF 509 >ref|XP_002319944.1| f-box family protein [Populus trichocarpa] gi|222858320|gb|EEE95867.1| f-box family protein [Populus trichocarpa] Length = 511 Score = 61.2 bits (147), Expect = 4e-07 Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 16/217 (7%) Frame = +1 Query: 10 SIQNLSSVSIARIGLFPPSTSSNDANNEFCDNYARKILSGLHNVKKLSFEGSFVELVTRD 189 S+ NL+S+ A +G + + + N+ LSGL +V L+ + VE+++ Sbjct: 296 SLVNLTSLHEASVGFSLLHENLSVEKLQSVCNF----LSGLSHVHSLTLDSQCVEILSNK 351 Query: 190 RELPTL-QACCSLKHLQLNMHATKNQVQAITLLLRIYPNLQTLDILCYQGASPSSNKLNM 366 ++ L +LK L+L+ KN V + L R P L TL + + N Sbjct: 352 NDIINLLHPFNNLKVLELHTGFEKNNVPGLAFLFRSSPTLHTLILKIINDFKTERRQWNR 411 Query: 367 ----------EEYWRTEELSTRDVLKRLKEVQIRLHKGAEIELDLVRYLLGSADNLEKMS 516 E+YW ++ + R L LK V+I E E+ L ++LL +L++M+ Sbjct: 412 DLWDLSTSAEEQYWESQLQALRPFLDHLKVVKIHGFLECENEVSLAKFLLKHGKDLQEMT 471 Query: 517 IKFLG-----DNENRMRISMKLLTFTRVSPNAAIFFL 612 + D+ R ++ +++ F+ S NA I FL Sbjct: 472 LCTANCCNFKDSLRRQKVRSQIMGFSWASSNAKIVFL 508 >ref|XP_003636673.1| F-box family protein [Medicago truncatula] gi|355502608|gb|AES83811.1| F-box family protein [Medicago truncatula] Length = 515 Score = 58.2 bits (139), Expect = 3e-06 Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 14/181 (7%) Frame = +1 Query: 109 ARKILSGLHNVKKLSFEGSFVELVTRDRELPTLQACCSLKHLQLNMHATKNQVQAITLLL 288 A SGL + L+ +E++++ + + +Q +LK L+L+ K+ VQA+ L Sbjct: 336 ANNFFSGLSHAHSLTLNTQTIEILSKYKFI--IQPFYNLKSLELHTSLNKSNVQALACLF 393 Query: 289 RIYPNLQTLDILCYQGASPSSNKLNM----------EEYWRTEELSTRDVLKRLKEVQIR 438 R P L T ++ N E+YW ++ S + L+ LK V+I+ Sbjct: 394 RSCPTLHTFNLEIINDYKIERKLWNRDLWDMTSTEEEQYWESQIPSLKSFLQHLKVVKIK 453 Query: 439 LHKGAEIELDLVRYLLGSADNLEKMSI----KFLGDNENRMRISMKLLTFTRVSPNAAIF 606 E+ LV++LL LE+M + D R +I +++ F+ S NA + Sbjct: 454 GFLDCANEVTLVKFLLKHGKGLEEMRLCTGHSNRRDTLRRQKIKSQMMGFSWASSNAKVE 513 Query: 607 F 609 F Sbjct: 514 F 514 >ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max] Length = 427 Score = 56.6 bits (135), Expect = 1e-05 Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 2/208 (0%) Frame = +1 Query: 1 ENFSIQNLSSVSIARIGLFPPSTSSNDANNEFCDNYARKILSGLHNVKKLSFEGSFVE-L 177 E+ S +N +++ IGL+ + N + + K L +V++L + F++ L Sbjct: 226 EDISFENTFQLAVVSIGLYL-NFEINQSRLHGGSSNLLKFFVHLPHVQRLEVQSYFLKYL 284 Query: 178 VTRDRELPTLQACCSLKHLQLNMHATK-NQVQAITLLLRIYPNLQTLDILCYQGASPSSN 354 + + C L +L + ++ ++ A LLR PNLQ L+IL A P Sbjct: 285 AVGVVPIKLPRPCIDLSYLSIRINFNDLKEISASLCLLRSSPNLQELEIL----ARPEEQ 340 Query: 355 KLNMEEYWRTEELSTRDVLKRLKEVQIRLHKGAEIELDLVRYLLGSADNLEKMSIKFLGD 534 + + + E++ + +L+ V+I G + ELD + +LL + LE+M++K + + Sbjct: 341 TVLLTHTYCWEDVYFSCPVMQLRYVKIDGISGIKPELDFINFLLLHSPVLERMTVKPVAN 400 Query: 535 NENRMRISMKLLTFTRVSPNAAIFFLQP 618 + + +LL F R S A I +L+P Sbjct: 401 --VGLELMKELLRFRRASGQAEIIYLEP 426