BLASTX nr result

ID: Coptis25_contig00002352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002352
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238525.1| uncharacterized protein LOC100306161 [Glycin...   129   1e-27
gb|AFK33585.1| unknown [Medicago truncatula] gi|388495224|gb|AFK...   124   5e-26
ref|XP_003600619.1| hypothetical protein MTR_3g064350 [Medicago ...   124   5e-26
ref|XP_003538367.1| PREDICTED: uncharacterized protein LOC100305...   118   4e-24
emb|CBI27985.3| unnamed protein product [Vitis vinifera]              117   5e-24

>ref|NP_001238525.1| uncharacterized protein LOC100306161 [Glycine max]
           gi|255627733|gb|ACU14211.1| unknown [Glycine max]
          Length = 194

 Score =  129 bits (325), Expect = 1e-27
 Identities = 73/132 (55%), Positives = 93/132 (70%), Gaps = 8/132 (6%)
 Frame = -2

Query: 607 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKSCKSYGG 428
           PL +M SL QQLP KRGLSK YQGKSQSFTSL+NVRSLEDLAK +NP  K++KSCKSY G
Sbjct: 71  PLGDMTSLFQQLPIKRGLSKFYQGKSQSFTSLTNVRSLEDLAKPENPYNKRLKSCKSYAG 130

Query: 427 GLSETSNKVSHPKTCSKIISKK-----TAARGSWSSL-AAKRNNSFLGNRPPVPPQRTCS 266
           GL+E+ +        ++ +SK+     T++RGS SS        +F+G+RPP+PP R+ S
Sbjct: 131 GLAESHS--------TRAVSKRGMVHSTSSRGSCSSFRRGSATTNFMGSRPPIPPHRSTS 182

Query: 265 --TLFNQTSLFA 236
             T+ NQT LFA
Sbjct: 183 TNTIPNQTVLFA 194


>gb|AFK33585.1| unknown [Medicago truncatula] gi|388495224|gb|AFK35678.1| unknown
           [Medicago truncatula]
          Length = 205

 Score =  124 bits (311), Expect = 5e-26
 Identities = 70/134 (52%), Positives = 97/134 (72%), Gaps = 10/134 (7%)
 Frame = -2

Query: 607 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKSCKSYGG 428
           PL +M+SL QQLP KRGLSK YQGKSQSFTSL+NV+SLEDLAK ++P  K++KSC+SYGG
Sbjct: 75  PLSDMSSLFQQLPIKRGLSKFYQGKSQSFTSLTNVKSLEDLAKPESPYNKRLKSCRSYGG 134

Query: 427 GLSETSNKVSHPKTCSKIISKK----TAARGSWSSLAAKR--NNSFLGNRPPVPPQRTCS 266
                 ++ S  K+ S+++SK+     ++RGS SSL A++   ++F+G+RPP+ P    S
Sbjct: 135 FY---ESQESSFKSMSRLVSKRGVNSASSRGSCSSLNARKGSGSNFMGSRPPIHPHNRSS 191

Query: 265 T----LFNQTSLFA 236
           T    + NQT+LFA
Sbjct: 192 TSTNNISNQTALFA 205


>ref|XP_003600619.1| hypothetical protein MTR_3g064350 [Medicago truncatula]
           gi|355489667|gb|AES70870.1| hypothetical protein
           MTR_3g064350 [Medicago truncatula]
          Length = 201

 Score =  124 bits (311), Expect = 5e-26
 Identities = 70/134 (52%), Positives = 97/134 (72%), Gaps = 10/134 (7%)
 Frame = -2

Query: 607 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKSCKSYGG 428
           PL +M+SL QQLP KRGLSK YQGKSQSFTSL+NV+SLEDLAK ++P  K++KSC+SYGG
Sbjct: 71  PLSDMSSLFQQLPIKRGLSKFYQGKSQSFTSLTNVKSLEDLAKPESPYNKRLKSCRSYGG 130

Query: 427 GLSETSNKVSHPKTCSKIISKK----TAARGSWSSLAAKR--NNSFLGNRPPVPPQRTCS 266
                 ++ S  K+ S+++SK+     ++RGS SSL A++   ++F+G+RPP+ P    S
Sbjct: 131 FY---ESQESSFKSMSRLVSKRGVNSASSRGSCSSLNARKGSGSNFMGSRPPIHPHNRSS 187

Query: 265 T----LFNQTSLFA 236
           T    + NQT+LFA
Sbjct: 188 TSTNNISNQTALFA 201


>ref|XP_003538367.1| PREDICTED: uncharacterized protein LOC100305943 [Glycine max]
           gi|255627055|gb|ACU13872.1| unknown [Glycine max]
          Length = 235

 Score =  118 bits (295), Expect = 4e-24
 Identities = 70/133 (52%), Positives = 91/133 (68%), Gaps = 9/133 (6%)
 Frame = -2

Query: 607 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKSCKSYGG 428
           PL +M+SL QQLP KRGLSK YQGKSQSFTSL+NVRSLEDL K +NP  K++KS KSY G
Sbjct: 111 PLSDMSSLFQQLPIKRGLSKFYQGKSQSFTSLTNVRSLEDLVKPENPHNKRLKSYKSYAG 170

Query: 427 GLSETSNKVSHPKTCSKIISK-----KTAARGSWSSLAAKRNNSFLG--NRPPVPPQRTC 269
           GL+E+ +        ++++SK      T++RGS SSL      +F+G  +RP +P  R+ 
Sbjct: 171 GLAESHS--------TRVVSKGGMMHSTSSRGSCSSLGRGSVTNFMGSNSRPSIPSHRST 222

Query: 268 S--TLFNQTSLFA 236
           S  T+ NQT LFA
Sbjct: 223 STNTIPNQTVLFA 235


>emb|CBI27985.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  117 bits (294), Expect = 5e-24
 Identities = 68/118 (57%), Positives = 82/118 (69%)
 Frame = -2

Query: 628 TNNTKGGPLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMK 449
           T+    GPLYE++ LM QLP KRGLSK++QGKSQSFTSL++V+SLEDLAK   P +KKMK
Sbjct: 41  TSPLSNGPLYELSELMAQLPIKRGLSKYFQGKSQSFTSLASVKSLEDLAKKGTPSRKKMK 100

Query: 448 SCKSYGGGLSETSNKVSHPKTCSKIISKKTAARGSWSSLAAKRNNSFLGNRPPVPPQR 275
           SCKSYGGGL    +K+  PK     ISKK A+RGS  S   +R     G RPP P Q+
Sbjct: 101 SCKSYGGGLD--VHKLYTPKA---TISKK-ASRGSLLSSLGRRGVIMGGCRPPSPLQK 152


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