BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002323
         (2000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...   870   0.0  
ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...   836   0.0  
ref|XP_002509464.1| eukaryotic translation initiation factor 3 s...   828   0.0  
ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation...   826   0.0  
ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation...   822   0.0  

>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Vitis vinifera]
          Length = 567

 Score =  870 bits (2249), Expect = 0.0
 Identities = 441/564 (78%), Positives = 475/564 (84%), Gaps = 3/564 (0%)
 Frame = -1

Query: 1946 FEIGTVPFNPDGWGPPETPSSLLSNHPNNVPFAPFNRSDKLGRIADWTXXXXXXXXXXNK 1767
            FE+G VPFNPDGWGPPE+ S  L NHP NVPFAPF+RSDKLGRIADWT           +
Sbjct: 5    FEVGAVPFNPDGWGPPESASPHLPNHPINVPFAPFSRSDKLGRIADWTRTYNNPSRNPLR 64

Query: 1766 TPISDSPFLLEDDVASGF---PDDDSTFRLVDXXXXXXXXXXXXXXFQQQRQLPQXXXXX 1596
             P SDS F    D + G     D+DS+FRLVD              FQQQRQLPQ     
Sbjct: 65   NP-SDSVFDFTGDDSFGAGIAADEDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEE 123

Query: 1595 XXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFTKM 1416
                            RLYN NR+G N  RREAAVFKSSVDIQPEW MLDQIPFSTF+K+
Sbjct: 124  VEARKREAEKERARRDRLYNLNRSGGNNQRREAAVFKSSVDIQPEWNMLDQIPFSTFSKL 183

Query: 1415 SFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLANED 1236
            SF+V EPEDLL+CG LE+YD++YDRV PK+E+RLERFKNRNFFKVTTTDDPVIRRLANED
Sbjct: 184  SFSVPEPEDLLLCGALEFYDRSYDRVTPKNERRLERFKNRNFFKVTTTDDPVIRRLANED 243

Query: 1235 KATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLPE 1056
            KATVFATD+ILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSV+ETSQEPLPE
Sbjct: 244  KATVFATDSILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPE 303

Query: 1055 AKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRRWK 876
            AKEDINSAYSLSVEAAYINQNFSQQVL+RDGNKVTFEE NPFA+EGEEVAS AYRYRRWK
Sbjct: 304  AKEDINSAYSLSVEAAYINQNFSQQVLIRDGNKVTFEEPNPFANEGEEVASVAYRYRRWK 363

Query: 875  LDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATELK 696
            LD+DMYLVARCEVQS +EV  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATELK
Sbjct: 364  LDDDMYLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELK 423

Query: 695  NNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNTSN 516
            NNANKLAKWTAQ+LLASAD+MKLGYVSR+HPRDHFNHVIL VVGYKPREFA QINLNT+N
Sbjct: 424  NNANKLAKWTAQALLASADLMKLGYVSRVHPRDHFNHVILAVVGYKPREFAAQINLNTTN 483

Query: 515  MWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPT 336
            MWGI+KSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP 
Sbjct: 484  MWGIIKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPA 543

Query: 335  EEEANAGEADAPANDAEDKEVVAE 264
             EEAN GEA+A   D E+KEV AE
Sbjct: 544  -EEANGGEANAAITDVEEKEVTAE 566


>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            isoform 1 [Glycine max] gi|356555340|ref|XP_003545991.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like isoform 2 [Glycine max]
          Length = 565

 Score =  836 bits (2160), Expect = 0.0
 Identities = 424/561 (75%), Positives = 461/561 (82%), Gaps = 2/561 (0%)
 Frame = -1

Query: 1949 AFEIGTVPFNPDGWGPPETPSSLLSNH--PNNVPFAPFNRSDKLGRIADWTXXXXXXXXX 1776
            AF+IG VPFN DGWGPP+  +S  +N+  P NVPFAPF+RSDKLGRIADWT         
Sbjct: 4    AFDIGAVPFNADGWGPPDNATSGSNNNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRS 63

Query: 1775 XNKTPISDSPFLLEDDVASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQRQLPQXXXXX 1596
              K P         DD      DDD++FRLVD              FQQQRQLPQ     
Sbjct: 64   --KNPADAVFDFANDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEE 121

Query: 1595 XXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFTKM 1416
                            RLY+ NR+  NQ RREAAVFKSSVDIQPEW M DQIPFSTF+K+
Sbjct: 122  VEAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKL 181

Query: 1415 SFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLANED 1236
            SF V EPEDLL+CG LEYYD+TYDR+ PK+E+RLERFKNRNFFKVTTTDDPVIRRLANED
Sbjct: 182  SFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANED 241

Query: 1235 KATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLPE 1056
            KATVFATD ILSTLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLLSV+ETSQEPLPE
Sbjct: 242  KATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPE 301

Query: 1055 AKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRRWK 876
            +K+DINSA+SLSVEAAYINQNFSQQVL+RDGNKVTF+E NPFA+EGEEVAS AYRYRRWK
Sbjct: 302  SKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWK 361

Query: 875  LDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATELK 696
            LD+DMYLVARCEV S ++V  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATELK
Sbjct: 362  LDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELK 421

Query: 695  NNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNTSN 516
            NNANKLAKWTAQ+LLASAD MKLGYVSRIHPRDHFNHVIL VVGYKPR+FA QINLNT+N
Sbjct: 422  NNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTN 481

Query: 515  MWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPT 336
            MWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP 
Sbjct: 482  MWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPA 541

Query: 335  EEEANAGEADAPANDAEDKEV 273
             E A  GEA A  ND EDK++
Sbjct: 542  -EGAEGGEAAATTNDVEDKQI 561


>ref|XP_002509464.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223549363|gb|EEF50851.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 574

 Score =  828 bits (2140), Expect = 0.0
 Identities = 425/573 (74%), Positives = 471/573 (82%), Gaps = 10/573 (1%)
 Frame = -1

Query: 1952 MAFEIGTVPFNPDGWGPPE----TPSSLLSNHPNNVPFAPFNRSDKLGRIADWTXXXXXX 1785
            + FE+G VPFNPDGWGPP+    + ++  S  P NVPFAPF+RSDKLGRIADWT      
Sbjct: 2    VGFEVGFVPFNPDGWGPPDAAFASAATTTSTLPLNVPFAPFSRSDKLGRIADWTRNINPN 61

Query: 1784 XXXXN-KTPISDSPFLLEDD----VASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQRQ 1620
                N K   SDS F    D     A+   DDDSTFRLVD              F Q RQ
Sbjct: 62   ANRPNSKQNASDSVFDFTADDSFPAATAAGDDDSTFRLVDGKPPPRPKFGPKWRFNQHRQ 121

Query: 1619 -LPQXXXXXXXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQ 1443
             LPQ                     RLYN NR+  NQPRREAAVFKSSVDIQPEW MLDQ
Sbjct: 122  QLPQRRDEEVEARKREAEKERARRDRLYNMNRSNQNQPRREAAVFKSSVDIQPEWNMLDQ 181

Query: 1442 IPFSTFTKMSFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDP 1263
            IPFSTF+K+SF+V EPEDLL+CGGLE+YD+++DR+ PK+E+RLERFKNRNFFKVTTTDDP
Sbjct: 182  IPFSTFSKLSFSVPEPEDLLLCGGLEFYDRSFDRITPKNERRLERFKNRNFFKVTTTDDP 241

Query: 1262 VIRRLANEDKATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVN 1083
            VIRRLANEDKATVFATD IL+TLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSV+
Sbjct: 242  VIRRLANEDKATVFATDTILATLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVH 301

Query: 1082 ETSQEPLPEAKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVAS 903
            ETSQEPLPEAK+D+NSAYSLSVEAAYINQNFSQQVL+RDGNKV+F+E NPFA+EGEEVAS
Sbjct: 302  ETSQEPLPEAKDDMNSAYSLSVEAAYINQNFSQQVLIRDGNKVSFDEPNPFATEGEEVAS 361

Query: 902  AAYRYRRWKLDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQR 723
             AYRYRRWKLD+DM+LVARCEVQS +EV  ++SF+TLNALNEFDPKYSGVDWR+KLETQR
Sbjct: 362  VAYRYRRWKLDDDMHLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQR 421

Query: 722  GAVLATELKNNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFA 543
            GAVLATELKNNANKLAKWTAQ+LLASAD+MKLGYVSR+HPRDH+NHVIL VVGYKPR+FA
Sbjct: 422  GAVLATELKNNANKLAKWTAQALLASADLMKLGYVSRVHPRDHYNHVILAVVGYKPRDFA 481

Query: 542  MQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLP 363
             QINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLP
Sbjct: 482  AQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLP 541

Query: 362  EDEQVQPPTEEEANAGEADAPANDAEDKEVVAE 264
            E+EQVQPP E+  NA EA+    D E K++ A+
Sbjct: 542  EEEQVQPPGEDTENA-EANGGTVDVEAKDIDAQ 573


>ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Glycine max]
          Length = 557

 Score =  826 bits (2133), Expect = 0.0
 Identities = 421/560 (75%), Positives = 460/560 (82%), Gaps = 1/560 (0%)
 Frame = -1

Query: 1949 AFEIGTVPFNPDGWGPPE-TPSSLLSNHPNNVPFAPFNRSDKLGRIADWTXXXXXXXXXX 1773
            AF+IG VPFN +GWGPP+ T +    N P NVPFAPF+RSDKLGRIADWT          
Sbjct: 4    AFDIGAVPFNAEGWGPPDSTITGSNINLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRS- 62

Query: 1772 NKTPISDSPFLLEDDVASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQRQLPQXXXXXX 1593
             K P +D+ F   +D      DDD TF LVD              F QQRQLPQ      
Sbjct: 63   -KNP-ADAVFDFTND------DDDDTFHLVDPKPPPRPKFGPKWRFPQQRQLPQRRDEEV 114

Query: 1592 XXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFTKMS 1413
                           RLY+ NR+  NQ RREAAVFKSSVDIQPEW M DQIPFSTF+K+S
Sbjct: 115  EAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLS 174

Query: 1412 FAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLANEDK 1233
            F V EPEDLL+CG LEYYD+TYDR+ PK+E+RLERFKNRNFFKVTTTDDP+IRRLANEDK
Sbjct: 175  FTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPIIRRLANEDK 234

Query: 1232 ATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLPEA 1053
            ATVFATD ILSTLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLLSV+ETSQEPLPE+
Sbjct: 235  ATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPES 294

Query: 1052 KEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRRWKL 873
            K+DINSA+SLSVEAAYINQNFSQQVL+RDGNKVTF+E NPFA+EGEEVAS AYRYRRWKL
Sbjct: 295  KDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKL 354

Query: 872  DNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATELKN 693
            D+DMYLVARCEV S ++V  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATELKN
Sbjct: 355  DDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKN 414

Query: 692  NANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNTSNM 513
            NANKLAKWTAQ+LLASAD MKLGYVSRIHPRDHFNHVIL VVGYKPR+FA QINLNT+NM
Sbjct: 415  NANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNM 474

Query: 512  WGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPTE 333
            WGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP+ 
Sbjct: 475  WGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPS- 533

Query: 332  EEANAGEADAPANDAEDKEV 273
            E A  GEA    ND EDK++
Sbjct: 534  EGAEGGEATTTTNDVEDKQI 553


>ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Cucumis sativus] gi|449506762|ref|XP_004162841.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like [Cucumis sativus]
          Length = 566

 Score =  822 bits (2123), Expect = 0.0
 Identities = 422/560 (75%), Positives = 466/560 (83%), Gaps = 4/560 (0%)
 Frame = -1

Query: 1946 FEIGTVPFNPDGWGPPETPSSLL--SNHPNNVPFAPFNRSDKLGRIADWTXXXXXXXXXX 1773
            FE+G VP+NPDGWGPP++ ++L+  SN P NVPFAPF+RSDKLGRIADWT          
Sbjct: 5    FEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRP- 63

Query: 1772 NKTPISDSPF-LLEDDVASGFPDDDSTFRLVDXXXXXXXXXXXXXXFQQQR-QLPQXXXX 1599
             KT  SDS F    DD      D+D +FRLVD              F QQR QLPQ    
Sbjct: 64   -KTA-SDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDE 121

Query: 1598 XXXXXXXXXXXXXXXXXRLYNQNRTGNNQPRREAAVFKSSVDIQPEWTMLDQIPFSTFTK 1419
                             RLYN NR+  N PRREAAVFKSSV+IQPEW MLDQIPFSTF+K
Sbjct: 122  EVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSK 181

Query: 1418 MSFAVSEPEDLLVCGGLEYYDKTYDRVNPKSEKRLERFKNRNFFKVTTTDDPVIRRLANE 1239
            +SF+V EPEDLL+CGGLE+YD+ YDR+ PK+E+RLERFKNRNFFKVTTTDDPVIRRLANE
Sbjct: 182  LSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANE 241

Query: 1238 DKATVFATDAILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLP 1059
            DKATVFATDAILSTLMCA RSVYSWDIV+QRVGNKLFFDKRDGSQLDLL+V+ETSQEPLP
Sbjct: 242  DKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLP 301

Query: 1058 EAKEDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEEGNPFASEGEEVASAAYRYRRW 879
            EAK+DINSAYSLSVEAAYINQNFSQQVLVRDGNKV F+E NPFA+EGEEVAS AYRYRRW
Sbjct: 302  EAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRW 361

Query: 878  KLDNDMYLVARCEVQSAIEVKGEQSFITLNALNEFDPKYSGVDWRKKLETQRGAVLATEL 699
            KLD+DMYLVARCEVQS +EV  ++SF+TLNALNEFDPKYSGVDWR+KLETQRGAVLATEL
Sbjct: 362  KLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATEL 421

Query: 698  KNNANKLAKWTAQSLLASADVMKLGYVSRIHPRDHFNHVILGVVGYKPREFAMQINLNTS 519
            KNNANKLAKWTAQ+LLASAD+MKLGYVSR+HPRDHFNHVIL VVGYKP++FA QINLNTS
Sbjct: 422  KNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNTS 481

Query: 518  NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPP 339
            NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPL E++QVQPP
Sbjct: 482  NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPP 541

Query: 338  TEEEANAGEADAPANDAEDK 279
             E+E N    +A  +DAE+K
Sbjct: 542  AEDE-NGVTPNAATDDAEEK 560