BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002319
         (1581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284120.1| PREDICTED: probable thylakoidal processing p...   326   1e-86
ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|2...   311   3e-82
ref|XP_003523894.1| PREDICTED: probable thylakoidal processing p...   304   5e-80
ref|XP_002879265.1| chloroplast thylakoidal processing peptidase...   301   4e-79
ref|NP_172171.1| signal peptidase I [Arabidopsis thaliana] gi|75...   298   2e-78

>ref|XP_002284120.1| PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic
            [Vitis vinifera] gi|147810057|emb|CAN78280.1|
            hypothetical protein VITISV_021649 [Vitis vinifera]
          Length = 368

 Score =  326 bits (835), Expect = 1e-86
 Identities = 192/389 (49%), Positives = 241/389 (61%), Gaps = 42/389 (10%)
 Frame = -3

Query: 1372 MAIRVTLSYSGYLAHNLASN--------------------LCPSSKV------------S 1289
            MAI++T++YSGY+A NLAS+                     CPS K             +
Sbjct: 1    MAIKLTVTYSGYVAQNLASSAGIRVGNCRSIHECWVRSRFFCPSQKPEVDSPVPSRAYQA 60

Query: 1288 NYRLFQTTCTARSSSLVFKSNNTKYSEIGSVRCETPXXXXXXXXXXXXXXXXXXXXXXXG 1109
            +YR  +  C A+ S+  +   +T   E+    C  P                        
Sbjct: 61   DYRRPKANCWAKVSTSAY---STLAGEVFGDSCRNPLIVGLISLMK-------------- 103

Query: 1108 VTSTG-SSSILGGF-----KPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEED 947
             +STG S S +G F     K +SI+PF    KWLP +EP                 DE D
Sbjct: 104  -SSTGVSESSVGVFGVSPLKATSILPFLPGSKWLPCNEPIQGSVG-----------DEVD 151

Query: 946  RERTR----KILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRS 779
            +  T+    ++++   ++ V  RS+WLSKL N CSED + + TA+TVSLL  S LAEPRS
Sbjct: 152  KGGTQCCDVEVISKPLDRKVLERSNWLSKLLNCCSEDARAVFTAVTVSLLFRSPLAEPRS 211

Query: 778  IPSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAK 599
            IPS SMYPTLDVGDRILAEKVSY FR PEV+DIVIFK P  LQ+ G+S+GDVFIKRIVAK
Sbjct: 212  IPSASMYPTLDVGDRILAEKVSYVFRNPEVSDIVIFKVPPILQEIGYSAGDVFIKRIVAK 271

Query: 598  EGDHVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGP 419
             GD+VEV +GKL+VN + Q+E++ILEPLAY M+ VLVP+GYVFV+GDNRNNSFDSHNWGP
Sbjct: 272  AGDYVEVSEGKLMVNGVAQEEDFILEPLAYNMDPVLVPEGYVFVLGDNRNNSFDSHNWGP 331

Query: 418  LPIKNIVGRSLLRYWPPSKISNTIYEQQA 332
            LPIKNIVGRS+LRYWPPSK+S+TIYE +A
Sbjct: 332  LPIKNIVGRSVLRYWPPSKVSDTIYEPEA 360


>ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|222835229|gb|EEE73664.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  311 bits (797), Expect = 3e-82
 Identities = 189/366 (51%), Positives = 224/366 (61%), Gaps = 22/366 (6%)
 Frame = -3

Query: 1372 MAIRVTLSYSGYLAHNLASNLCPSSKVSNY----RLFQ---TTCTARSSSLV-------- 1238
            MAIRVT S+SGY+A NL   +     ++      R+F    TT T  +S +         
Sbjct: 1    MAIRVTFSFSGYVAQNLGVRVGNCRYLNECFIRSRIFASPATTTTTHNSDIEPPGPRTGT 60

Query: 1237 -FKSNNTKYSEIGSVRCETPXXXXXXXXXXXXXXXXXXXXXXXGVTSTGSSSILGG---- 1073
             F+  N K +   S    +                          T+  S S +G     
Sbjct: 61   DFRRRNLKRNYSNSAAMYSTMAGEIFGDNCKGSAIAVGLVSLMKSTAGVSCSNMGACGIS 120

Query: 1072 -FKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRKILNDNGEKAVG 896
             FK  SI+PF +  +WLP +E      S            E DR  T  +   + EK   
Sbjct: 121  PFKAVSILPFLQGSRWLPCNEAVLGSRSP-----------EVDRGGTGTV--KSVEKVSE 167

Query: 895  GRS-SWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEK 719
             +S SW S++ N CSED K + TA TVSLL  S LAEPRSIPS SM PTLDVGDRILAEK
Sbjct: 168  SKSRSWFSRVFNVCSEDAKAMFTAATVSLLFRSTLAEPRSIPSSSMSPTLDVGDRILAEK 227

Query: 718  VSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDGKLLVNDIIQD 539
            VSY FRKPEV+DIVIFKAP  LQ+ GFSSGDVFIKRIVAK GD+VEV +GKL VN ++QD
Sbjct: 228  VSYVFRKPEVSDIVIFKAPPILQEFGFSSGDVFIKRIVAKAGDYVEVREGKLYVNGVVQD 287

Query: 538  EEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKI 359
            EE+I EPLAYEME VLVP+GYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS+ RYWPPSK+
Sbjct: 288  EEFIKEPLAYEMELVLVPEGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSVFRYWPPSKV 347

Query: 358  SNTIYE 341
            S+TIY+
Sbjct: 348  SDTIYD 353


>ref|XP_003523894.1| PREDICTED: probable thylakoidal processing peptidase 2,
            chloroplastic-like [Glycine max]
          Length = 362

 Score =  304 bits (778), Expect = 5e-80
 Identities = 177/361 (49%), Positives = 224/361 (62%), Gaps = 20/361 (5%)
 Frame = -3

Query: 1372 MAIRVTLSYSGYLAHNLASNLCPSSKVSNYRLFQTTCTARSSSLVFKSNNTKYSEIGSVR 1193
            MAIRVT S+SGY+A +LAS+     +V+N R  Q  C  R+            S  G VR
Sbjct: 1    MAIRVTFSFSGYVAQSLASSA--GVRVANSRCVQE-CWIRTRLSGATQKTDLDSSAGGVR 57

Query: 1192 ----------CETPXXXXXXXXXXXXXXXXXXXXXXXGVTST----GSSSILGG------ 1073
                       ++                         + ST    GSS+   G      
Sbjct: 58   NFAGPKPNCWAQSTYSTLTGEFLGDGCKSPIILGLISIMKSTAGVSGSSAAAAGIFGISP 117

Query: 1072 FKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRKILNDNGEKAVGG 893
            FK +SI+PF    KWLP +E   D  +            E D+  TR++++D        
Sbjct: 118  FKTTSIVPFLPGSKWLPCNESVPDPTTSW----------EVDKGGTRRVVSDTESNFA-- 165

Query: 892  RSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEKVS 713
            ++SWLS+L N CSED K   TA+TVSLL  S LAEPRSIPS SMYPTL+VGDR+L EKVS
Sbjct: 166  KTSWLSRLMNVCSEDAKAAFTAVTVSLLFKSSLAEPRSIPSSSMYPTLEVGDRVLTEKVS 225

Query: 712  YYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDGKLLVNDIIQDEE 533
            ++FRKP+V+DIVIFKAP  L++ GFSS DVFIKRIVAK GD VEV DGKLLVN   ++ +
Sbjct: 226  FFFRKPDVSDIVIFKAPPCLEEFGFSSSDVFIKRIVAKAGDTVEVRDGKLLVNGAAEERQ 285

Query: 532  YILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKISN 353
            +++EPLAYEM+ ++VP+GYVFVMGDNRNNSFDSHNWGPLP++NIVGRS+ RYWPPSK+S+
Sbjct: 286  FVVEPLAYEMDPMVVPEGYVFVMGDNRNNSFDSHNWGPLPVENIVGRSMFRYWPPSKVSD 345

Query: 352  T 350
            T
Sbjct: 346  T 346


>ref|XP_002879265.1| chloroplast thylakoidal processing peptidase [Arabidopsis lyrata
            subsp. lyrata] gi|297325104|gb|EFH55524.1| chloroplast
            thylakoidal processing peptidase [Arabidopsis lyrata
            subsp. lyrata]
          Length = 339

 Score =  301 bits (770), Expect = 4e-79
 Identities = 154/259 (59%), Positives = 190/259 (73%), Gaps = 2/259 (0%)
 Frame = -3

Query: 1102 STGSSSILG--GFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRK 929
            S+ + ++LG   FK SSIIPF +  KW+ +       E +D      +  D++D+E    
Sbjct: 89   SSTTMNVLGVSSFKASSIIPFLQGSKWMKNPP-----EVDDVDKGGTLCDDDDDKESR-- 141

Query: 928  ILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTL 749
                       G S W++KL N CSED K   TA+TVS+L  S LAEP+SIPS SMYPTL
Sbjct: 142  ----------SGGSGWVNKLLNICSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTL 191

Query: 748  DVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDG 569
            DVGDR++AEKVSY+FRKPEV+DIVIFKAP  L    +SS DVFIKRIVA EG+ VEV DG
Sbjct: 192  DVGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLDYDYSSNDVFIKRIVASEGNWVEVRDG 251

Query: 568  KLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS 389
            KLLVNDI+Q+E+++LEP++YEME + VPKGYVFV+GDNRN SFDSHNWGPLPI+NIVGRS
Sbjct: 252  KLLVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRS 311

Query: 388  LLRYWPPSKISNTIYEQQA 332
            + RYWPPSK+S+TIY  QA
Sbjct: 312  VFRYWPPSKVSDTIYHDQA 330


>ref|NP_172171.1| signal peptidase I [Arabidopsis thaliana]
            gi|75312311|sp|Q9M9Z2.1|TPP2_ARATH RecName: Full=Probable
            thylakoidal processing peptidase 2, chloroplastic;
            AltName: Full=Signal peptidase I-2; Flags: Precursor
            gi|7523697|gb|AAF63136.1|AC011001_6 putative signal
            peptidase [Arabidopsis thaliana]
            gi|89000987|gb|ABD59083.1| At1g06870 [Arabidopsis
            thaliana] gi|332189926|gb|AEE28047.1| signal peptidase I
            [Arabidopsis thaliana]
          Length = 367

 Score =  298 bits (764), Expect = 2e-78
 Identities = 174/373 (46%), Positives = 221/373 (59%), Gaps = 27/373 (7%)
 Frame = -3

Query: 1372 MAIRVTLSYSGYLAHNLASNLCPSSKVSNYR-LFQTTCTAR------------------- 1253
            MAIRVT +YS Y+A ++AS+        + R  F+T    R                   
Sbjct: 1    MAIRVTFTYSSYVARSIASSAGTRVGTGDVRSCFETWVRPRFCGHNQIPDIVDKSPGSNT 60

Query: 1252 ---SSSLVFKSNNTKYS----EIGSVRCETPXXXXXXXXXXXXXXXXXXXXXXXGVTSTG 1094
               SS    +  ++ YS    EI    C++P                        +T  G
Sbjct: 61   WGPSSGPRARPASSMYSTIAREILEEGCKSPLVLGMISLMNLTGAPQFSG-----MTGLG 115

Query: 1093 SSSILGGFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRKILNDN 914
             S     FK SS+IPF +  KW+P       C      S+     D   +    K+  + 
Sbjct: 116  ISP----FKTSSVIPFLRGSKWMP-------CSIPATLSTDIAEVDRGGKVCDPKVKLEL 164

Query: 913  GEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDR 734
             +K   G + W++KL N CSED K   TA+TVSLL  S LAEP+SIPS SM PTLDVGDR
Sbjct: 165  SDKVSNGGNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDR 224

Query: 733  ILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDGKLLVN 554
            ++AEKVSY+FRKPEV+DIVIFKAP  L ++G+S  DVFIKRIVA EGD VEVCDGKLLVN
Sbjct: 225  VIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVN 284

Query: 553  DIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYW 374
            D +Q E+++LEP+ YEME + VP+GYVFV+GDNRN SFDSHNWGPLPIKNI+GRS+ RYW
Sbjct: 285  DTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYW 344

Query: 373  PPSKISNTIYEQQ 335
            PPSK+S+ I+ +Q
Sbjct: 345  PPSKVSDIIHHEQ 357