BLASTX nr result

ID: Coptis25_contig00002317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002317
         (1902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517855.1| DNA binding protein, putative [Ricinus commu...   303   1e-79
emb|CBI21901.3| unnamed protein product [Vitis vinifera]              285   4e-79
ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like...   296   1e-77
ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycin...   269   2e-69
ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like...   267   6e-69

>ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
            gi|223542837|gb|EEF44373.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 424

 Score =  303 bits (776), Expect = 1e-79
 Identities = 190/384 (49%), Positives = 211/384 (54%), Gaps = 16/384 (4%)
 Frame = +1

Query: 514  VLPDLEMDSDMLA----XXXXXXXXXXXXNTSYSNEKVXXXXXXXXXXXXXXXXXXXXXX 681
            VLPDLEMD ++LA                NT  SNEK+                      
Sbjct: 46   VLPDLEMDPEILAEFSVSSAGSGGEESDINTPVSNEKL-EDSSRKDEEDKISGSGLDSSL 104

Query: 682  XXXXXXIVSKRHESVRVNSSPKE------XXXXXXXXXXXXXXXXMKVDWTPELHRRFVQ 843
                  IVSKR ESV VN   KE                      +KVDWTP+LHRRFVQ
Sbjct: 105  STRGEEIVSKRDESVVVNLVSKESDKGRKSSSTQAKNSNHQGKRKVKVDWTPDLHRRFVQ 164

Query: 844  AVEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHIY 1023
            AVEQLG+DKAVPSRILELMGIDCLTRHNIASHLQKYRSH+KHL AREAEAA+W+ RR +Y
Sbjct: 165  AVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAATWSHRRQVY 224

Query: 1024 G--GVGGGSKRDLTSW---XXXXXXXXXXXXXXXXXXXLHVWGHPAAVEKPVMPMWPKHI 1188
            G  G GGG KR++T W                      LHVWGHP  +E+P++ MWPKH+
Sbjct: 225  GAPGGGGGGKREVTPWHAPTMGFPPITPMHHHHPHFRPLHVWGHP-PMEQPLVHMWPKHL 283

Query: 1189 AHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVPSALTPGTPCFPPIHAPTRFPT 1368
            AHS                                  VPS L PGTPCFP   APTRF T
Sbjct: 284  AHSPSPPPPPPRTWSPHPPPDPSYWHHHPHQQR----VPSGLIPGTPCFPQPVAPTRFAT 339

Query: 1369 PAVPGIPPPLAMYKVDQGIGVSSAQSHSH-PPFDFHPSKESIDAAIGDVLSKXXXXXXXX 1545
            P VPGIPP  AMYKVD GIGV + QS  + PPFDFHPSKESIDAAIGDV+SK        
Sbjct: 340  PPVPGIPPH-AMYKVDPGIGVPTRQSGPNPPPFDFHPSKESIDAAIGDVISKPWLPLPLG 398

Query: 1546 XXXXXXDCVMVELQRQGVPKIPPT 1617
                  D V+ ELQRQGV KIPPT
Sbjct: 399  LKPPSLDGVIGELQRQGVAKIPPT 422


>emb|CBI21901.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  285 bits (729), Expect(2) = 4e-79
 Identities = 168/315 (53%), Positives = 184/315 (58%), Gaps = 9/315 (2%)
 Frame = +1

Query: 700  IVSKRHESVRVNSSPKEXXXXXXXXXXXXXXXX---MKVDWTPELHRRFVQAVEQLGMDK 870
            IVSKR ESV  N+SPKE                   +KVDWTPELHRRFVQAVEQLG+DK
Sbjct: 59   IVSKRSESVATNASPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDK 118

Query: 871  AVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHIYG--GVGGGS 1044
            AVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+Q+R +YG    GGG 
Sbjct: 119  AVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQKRQMYGVAAGGGGH 178

Query: 1045 KRDLTSW-XXXXXXXXXXXXXXXXXXXLHVWGHPAAVEKPVMPMWPKHIAHSXXXXXXXX 1221
            KR++  W                    LHVWGHP  V++  M MWPKH+ HS        
Sbjct: 179  KREMGGWIPPTMGFPHITPMHHHPFRPLHVWGHP-TVDQSAMHMWPKHLPHSPSPPPPPP 237

Query: 1222 XXXXXXXXXXXXXXXXXXXXXXXXXLVPSALTPGTPCFPPIHAPTRFPTPAVPGIPPPLA 1401
                                      VP+ LT GTPCFP   A  RF TP V GIPP   
Sbjct: 238  PTWPPSATPPSPSPDPYWHPHHQR--VPNGLTQGTPCFPQPLAAARFATPPVTGIPPH-P 294

Query: 1402 MYKVDQ---GIGVSSAQSHSHPPFDFHPSKESIDAAIGDVLSKXXXXXXXXXXXXXXDCV 1572
            MYKVD    GIGV +  S   P FDFHPSKE+IDAAIGD LSK              D V
Sbjct: 295  MYKVDHNHPGIGVPARHSGPFPLFDFHPSKETIDAAIGDALSKPWQPLPLGLKPPSLDGV 354

Query: 1573 MVELQRQGVPKIPPT 1617
            MVELQRQGVPKIPPT
Sbjct: 355  MVELQRQGVPKIPPT 369



 Score = 38.5 bits (88), Expect(2) = 4e-79
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +2

Query: 443 TSTGSLCLMILISMIYLLASVKETYCQTWRWIQTCWLSFHLVEARSQSLIR 595
           TS    C  + IS I+  A   E YC+TWRW Q   L+F L   ++ +  R
Sbjct: 5   TSMKGTCSNVSISTIFSSAYTTERYCRTWRWTQKFSLNFPLAPEKNPTSSR 55


>ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
          Length = 432

 Score =  296 bits (759), Expect = 1e-77
 Identities = 195/434 (44%), Positives = 218/434 (50%), Gaps = 19/434 (4%)
 Frame = +1

Query: 373  MLAVSSLISTSNGREGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VLPDLEM 534
            MLAVS L ST++ REGEM                                   +LPDLEM
Sbjct: 1    MLAVSPLRSTNDEREGEMESFSIGADDFPDFYEGNLLECIDFDDLFIGIHDGEILPDLEM 60

Query: 535  DSDMLAXXXXXXXXXXXXNTSYSNEKVXXXXXXXXXXXXXXXXXXXXXXXXXXXX----I 702
            D ++LA            NTS + +KV                                I
Sbjct: 61   DPEILAEFSVSAGEESDVNTSVTEKKVEDNPKKEEEDKVSDTGSGSGLGYGSSSSRGEEI 120

Query: 703  VSKRHESVRVNSSPKEXXXXXXXXXXXXXXXX---MKVDWTPELHRRFVQAVEQLGMDKA 873
            VSKR ESV  N+SPKE                   +KVDWTPELHRRFVQAVEQLG+DKA
Sbjct: 121  VSKRSESVATNASPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKA 180

Query: 874  VPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHIYG--GVGGGSK 1047
            VPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+Q+R +YG    GGG K
Sbjct: 181  VPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQKRQMYGVAAGGGGHK 240

Query: 1048 RDLTSW-XXXXXXXXXXXXXXXXXXXLHVWGHPAAVEKPVMPMWPKHIAHSXXXXXXXXX 1224
            R++  W                    LHVWGHP  V++  M MWPKH+ HS         
Sbjct: 241  REMGGWIPPTMGFPHITPMHHHPFRPLHVWGHP-TVDQSAMHMWPKHLPHSPSPPPPPPP 299

Query: 1225 XXXXXXXXXXXXXXXXXXXXXXXXLVPSALTPGTPCFPPIHAPTRFPTPAVPGIPPPLAM 1404
                                     VP+ LT GTPCFP   A  RF TP V GIPP   M
Sbjct: 300  TWPPSATPPSPSPDPYWHPHHQR--VPNGLTQGTPCFPQPLAAARFATPPVTGIPPH-PM 356

Query: 1405 YKVDQ---GIGVSSAQSHSHPPFDFHPSKESIDAAIGDVLSKXXXXXXXXXXXXXXDCVM 1575
            YKVD    GIGV +  S   P FDFHPSKE+IDAAIGD LSK              D VM
Sbjct: 357  YKVDHNHPGIGVPARHSGPFPLFDFHPSKETIDAAIGDALSKPWQPLPLGLKPPSLDGVM 416

Query: 1576 VELQRQGVPKIPPT 1617
            VELQRQGVPKIPPT
Sbjct: 417  VELQRQGVPKIPPT 430


>ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycine max]
            gi|255638900|gb|ACU19752.1| unknown [Glycine max]
          Length = 426

 Score =  269 bits (688), Expect = 2e-69
 Identities = 157/319 (49%), Positives = 183/319 (57%), Gaps = 11/319 (3%)
 Frame = +1

Query: 700  IVSKRHESVRVNSSPKEXXXXXXXXXXXXXXXX-----------MKVDWTPELHRRFVQA 846
            IVS+R ESV VN +PK+                           +KVDWTPELHRRFVQA
Sbjct: 132  IVSERDESVVVNPAPKDGGKGRKSSSAQSKNNSSSNNNPQGKRKVKVDWTPELHRRFVQA 191

Query: 847  VEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHIYG 1026
            VEQLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+QRR +  
Sbjct: 192  VEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQL-- 249

Query: 1027 GVGGGSKRDLTSWXXXXXXXXXXXXXXXXXXXLHVWGHPAAVEKPVMPMWPKHIAHSXXX 1206
               GG KR+ + W                   LHVWGHP ++++  M MWPKH+ +S   
Sbjct: 250  -CAGGGKREGSPWLAPTMGFPPMTPPMHHFRPLHVWGHP-SMDQSFMHMWPKHLPNS--- 304

Query: 1207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVPSALTPGTPCFPPIHAPTRFPTPAVPGI 1386
                                          LVP+AL PGT CFP +  PTRF +P VPGI
Sbjct: 305  ----------PPLSWPPPAAPPQEPSFWHQLVPNALIPGTACFPQLLTPTRFGSPPVPGI 354

Query: 1387 PPPLAMYKVDQGIGVSSAQSHSHPPFDFHPSKESIDAAIGDVLSKXXXXXXXXXXXXXXD 1566
            PP  AMYK D  IG+        P FDF+PSKE IDAAIGDVLSK              D
Sbjct: 355  PPH-AMYKADHDIGLPG------PLFDFYPSKECIDAAIGDVLSKPWLPLPIGLKAPALD 407

Query: 1567 CVMVELQRQGVPKIPPTTS 1623
             VM ELQRQG+P IPP+++
Sbjct: 408  SVMSELQRQGIPNIPPSSA 426


>ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like [Glycine max]
          Length = 436

 Score =  267 bits (683), Expect = 6e-69
 Identities = 175/387 (45%), Positives = 199/387 (51%), Gaps = 19/387 (4%)
 Frame = +1

Query: 514  VLPDLEMDSDMLAXXXXXXXXXXXXNTSYS--------NEKVXXXXXXXXXXXXXXXXXX 669
            VLPDLEMD +MLA            ++S S        N  V                  
Sbjct: 57   VLPDLEMDPEMLAEFSLSTEDSEIASSSVSVANNNNDGNNIVTTTEKQDDEVIIIASNSS 116

Query: 670  XXXXXXXXXXIVSKRHES-VRVNSSPKEXXXXXXXXXXXXXXXX-----MKVDWTPELHR 831
                      IVSK  ES V VN SPKE                     +KVDWTPELHR
Sbjct: 117  SDSGSSQGEEIVSKSDESEVVVNPSPKESEKGRKSSNHASRNNNQGKRKVKVDWTPELHR 176

Query: 832  RFVQAVEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQR 1011
            RFVQAVEQLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAA W+QR
Sbjct: 177  RFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAARWSQR 236

Query: 1012 RHIYG----GVGGGSKRDLTSWXXXXXXXXXXXXXXXXXXXLHVWGHPAAVEKPVMPMWP 1179
            + + G    G GGGSKR++  W                   LHVWGH   +++  M MWP
Sbjct: 237  KQLLGAAGAGRGGGSKREVNPW-LAPTMGFPPMSPMHHFRPLHVWGH-HNMDQSFMHMWP 294

Query: 1180 KHIAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVPSALTPGTPCFPPIHAPTR 1359
            KH  +S                                 L P+A T GTPCFP     TR
Sbjct: 295  KHPPYS-------PSPPAWPPRTAPSPPSPDPLYWHQHQLAPNAPTTGTPCFPQPLTTTR 347

Query: 1360 FPTPAVPGIPPPLAMYK-VDQGIGVSSAQSHSHPPFDFHPSKESIDAAIGDVLSKXXXXX 1536
            F +  VPGIPP  AMY+ VD GIG+ ++Q    P  DFHPSKESIDAAI DVLSK     
Sbjct: 348  FGSQTVPGIPPRHAMYQIVDPGIGIPASQPPPRPLVDFHPSKESIDAAISDVLSKPWLPL 407

Query: 1537 XXXXXXXXXDCVMVELQRQGVPKIPPT 1617
                     D VM ELQRQG+PKIPP+
Sbjct: 408  PLGLKAPALDGVMGELQRQGIPKIPPS 434


Top