BLASTX nr result
ID: Coptis25_contig00002302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002302
(1701 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini... 800 0.0
ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thal... 797 0.0
ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus commu... 796 0.0
gb|AGD80034.1| alpha-tubulin 1 [Hevea brasiliensis] 795 0.0
ref|XP_004149645.1| PREDICTED: tubulin alpha-3 chain-like [Cucum... 793 0.0
>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
Length = 449
Score = 800 bits (2066), Expect = 0.0
Identities = 393/430 (91%), Positives = 399/430 (92%)
Frame = +3
Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT+VGV HDAFNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVGHDAFNTFFSETGAGK 60
Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644
RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004
RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDLAALEK 1394
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
gi|15241179|ref|NP_197479.1| tubulin alpha-3/alpha-5
chain [Arabidopsis thaliana]
gi|297808045|ref|XP_002871906.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|297812159|ref|XP_002873963.1| tubulin alpha-3
[Arabidopsis lyrata subsp. lyrata]
gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName: Full=Tubulin
alpha-3 chain gi|408407918|sp|B9DHQ0.2|TBA5_ARATH
RecName: Full=Tubulin alpha-5 chain
gi|13605805|gb|AAK32888.1|AF367301_1 AT5g19770/T29J13_190
[Arabidopsis thaliana] gi|166912|gb|AAA32888.1|
alpha-tubulin [Arabidopsis thaliana]
gi|166918|gb|AAA32891.1| alpha-5 tubulin [Arabidopsis
thaliana] gi|14532776|gb|AAK64169.1| putative tubulin
alpha-5 chain [Arabidopsis thaliana]
gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
alpha-5 chain [Arabidopsis thaliana]
gi|23397154|gb|AAN31860.1| putative tubulin alpha-5 chain
[Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
putative tubulin alpha-5 chain [Arabidopsis thaliana]
gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
[Arabidopsis thaliana] gi|24899739|gb|AAN65084.1| unknown
protein [Arabidopsis thaliana]
gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1| tubulin
alpha-3 [Arabidopsis lyrata subsp. lyrata]
gi|332005364|gb|AED92747.1| tubulin alpha-3/alpha-5 chain
[Arabidopsis thaliana] gi|332005365|gb|AED92748.1|
tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
Length = 450
Score = 797 bits (2059), Expect = 0.0
Identities = 391/430 (90%), Positives = 398/430 (92%)
Frame = +3
Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT+VGVAHDAFNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644
RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004
RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLS+PEIT+AVFEP+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300
Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDLAALEK 1394
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus communis]
gi|223528272|gb|EEF30323.1| tubulin alpha chain, putative
[Ricinus communis]
Length = 449
Score = 796 bits (2056), Expect = 0.0
Identities = 390/430 (90%), Positives = 398/430 (92%)
Frame = +3
Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGV HDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVGHDAFNTFFSETGSGK 60
Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644
RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004
RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364
+VVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDLAALEK 1394
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>gb|AGD80034.1| alpha-tubulin 1 [Hevea brasiliensis]
Length = 449
Score = 795 bits (2054), Expect = 0.0
Identities = 389/430 (90%), Positives = 398/430 (92%)
Frame = +3
Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284
MREIISIHIGQAGIQVGNSCWELYCLEHGI PDGMMPSDTSVGVAHDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDTSVGVAHDAFNTFFSETGSGK 60
Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGPYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644
RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004
RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLA+VQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDLAALEK 1394
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>ref|XP_004149645.1| PREDICTED: tubulin alpha-3 chain-like [Cucumis sativus]
gi|449515790|ref|XP_004164931.1| PREDICTED: tubulin
alpha-3 chain-like [Cucumis sativus]
Length = 449
Score = 793 bits (2049), Expect = 0.0
Identities = 390/430 (90%), Positives = 397/430 (92%)
Frame = +3
Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTS GVAHDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSEGVAHDAFNTFFSETGSGK 60
Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464
HVPRAIFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644
RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI+RPTYTNLNR
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIDRPTYTNLNRLISQIISSLTT 240
Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004
RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364
TVVPGGDLA VQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLALVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 1365 AREDLAALEK 1394
AREDLAALEK
Sbjct: 421 AREDLAALEK 430