BLASTX nr result
ID: Coptis25_contig00002302
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002302 (1701 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini... 800 0.0 ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thal... 797 0.0 ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus commu... 796 0.0 gb|AGD80034.1| alpha-tubulin 1 [Hevea brasiliensis] 795 0.0 ref|XP_004149645.1| PREDICTED: tubulin alpha-3 chain-like [Cucum... 793 0.0 >ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera] Length = 449 Score = 800 bits (2066), Expect = 0.0 Identities = 393/430 (91%), Positives = 399/430 (92%) Frame = +3 Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT+VGV HDAFNTFFSETGAGK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVGHDAFNTFFSETGAGK 60 Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120 Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644 RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180 Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300 Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360 Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364 TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420 Query: 1365 AREDLAALEK 1394 AREDLAALEK Sbjct: 421 AREDLAALEK 430 >ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] gi|15241179|ref|NP_197479.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] gi|297808045|ref|XP_002871906.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] gi|297812159|ref|XP_002873963.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName: Full=Tubulin alpha-3 chain gi|408407918|sp|B9DHQ0.2|TBA5_ARATH RecName: Full=Tubulin alpha-5 chain gi|13605805|gb|AAK32888.1|AF367301_1 AT5g19770/T29J13_190 [Arabidopsis thaliana] gi|166912|gb|AAA32888.1| alpha-tubulin [Arabidopsis thaliana] gi|166918|gb|AAA32891.1| alpha-5 tubulin [Arabidopsis thaliana] gi|14532776|gb|AAK64169.1| putative tubulin alpha-5 chain [Arabidopsis thaliana] gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis thaliana] gi|19310733|gb|AAL85097.1| putative tubulin alpha-5 chain [Arabidopsis thaliana] gi|23397154|gb|AAN31860.1| putative tubulin alpha-5 chain [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1| putative tubulin alpha-5 chain [Arabidopsis thaliana] gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190 [Arabidopsis thaliana] gi|24899739|gb|AAN65084.1| unknown protein [Arabidopsis thaliana] gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] gi|332005364|gb|AED92747.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] gi|332005365|gb|AED92748.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] Length = 450 Score = 797 bits (2059), Expect = 0.0 Identities = 391/430 (90%), Positives = 398/430 (92%) Frame = +3 Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT+VGVAHDAFNTFFSETGAGK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60 Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464 HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120 Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644 RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180 Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLS+PEIT+AVFEP+S Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300 Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPP Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360 Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364 TVVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420 Query: 1365 AREDLAALEK 1394 AREDLAALEK Sbjct: 421 AREDLAALEK 430 >ref|XP_002532068.1| tubulin alpha chain, putative [Ricinus communis] gi|223528272|gb|EEF30323.1| tubulin alpha chain, putative [Ricinus communis] Length = 449 Score = 796 bits (2056), Expect = 0.0 Identities = 390/430 (90%), Positives = 398/430 (92%) Frame = +3 Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGV HDAFNTFFSETG+GK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVGHDAFNTFFSETGSGK 60 Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464 HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120 Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644 RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180 Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300 Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360 Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364 +VVPGGDLAKVQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420 Query: 1365 AREDLAALEK 1394 AREDLAALEK Sbjct: 421 AREDLAALEK 430 >gb|AGD80034.1| alpha-tubulin 1 [Hevea brasiliensis] Length = 449 Score = 795 bits (2054), Expect = 0.0 Identities = 389/430 (90%), Positives = 398/430 (92%) Frame = +3 Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284 MREIISIHIGQAGIQVGNSCWELYCLEHGI PDGMMPSDTSVGVAHDAFNTFFSETG+GK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDTSVGVAHDAFNTFFSETGSGK 60 Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464 HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGPYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120 Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644 RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180 Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240 Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004 RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300 Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360 Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364 TVVPGGDLA+VQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE Sbjct: 361 TVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420 Query: 1365 AREDLAALEK 1394 AREDLAALEK Sbjct: 421 AREDLAALEK 430 >ref|XP_004149645.1| PREDICTED: tubulin alpha-3 chain-like [Cucumis sativus] gi|449515790|ref|XP_004164931.1| PREDICTED: tubulin alpha-3 chain-like [Cucumis sativus] Length = 449 Score = 793 bits (2049), Expect = 0.0 Identities = 390/430 (90%), Positives = 397/430 (92%) Frame = +3 Query: 105 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVAHDAFNTFFSETGAGK 284 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTS GVAHDAFNTFFSETG+GK Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSEGVAHDAFNTFFSETGSGK 60 Query: 285 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 464 HVPRAIFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120 Query: 465 RVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTA 644 RVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTA Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180 Query: 645 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXX 824 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI+RPTYTNLNR Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIDRPTYTNLNRLISQIISSLTT 240 Query: 825 XXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSIPEITSAVFEPSS 1004 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLS+PEIT+AVFEPSS Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300 Query: 1005 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVSTIKTKRTVQFVDWCPTGFKCGINYQPP 1184 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV+TIKTKRTVQFVDWCPTGFKCGINYQPP Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360 Query: 1185 TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 1364 TVVPGGDLA VQRAVCMISNNTAVAEVF+RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE Sbjct: 361 TVVPGGDLALVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420 Query: 1365 AREDLAALEK 1394 AREDLAALEK Sbjct: 421 AREDLAALEK 430