BLASTX nr result
ID: Coptis25_contig00002294
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002294 (609 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii] g... 71 1e-10 dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris] g... 71 1e-10 emb|CAF28642.1| ycf68 [Nymphaea alba] gi|50250389|emb|CAF28655.1... 62 8e-08 >dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii] gi|134286725|dbj|BAF50348.1| hypothetical protein [Crucihimalaya wallichii] gi|134286888|dbj|BAF50509.1| hypothetical protein [Lepidium virginicum] gi|134286902|dbj|BAF50523.1| hypothetical protein [Lepidium virginicum] gi|134286977|dbj|BAF50597.1| hypothetical protein [Lobularia maritima] gi|134286991|dbj|BAF50611.1| hypothetical protein [Lobularia maritima] Length = 111 Score = 71.2 bits (173), Expect = 1e-10 Identities = 34/50 (68%), Positives = 39/50 (78%) Frame = -1 Query: 372 YVFPRGLEKAAINRVSLILPTRKEVHEILFPFCRDQSIASRRTKNAWSLS 223 + FP GLEKAAINR+ LILP+RKE EILFPF RDQ I S R KNAW ++ Sbjct: 34 HAFPGGLEKAAINRIFLILPSRKEEREILFPFRRDQEIGSSRKKNAWLIN 83 >dbj|BAF50245.1| hypothetical protein [Capsella bursa-pastoris] gi|134286635|dbj|BAF50259.1| hypothetical protein [Capsella bursa-pastoris] Length = 111 Score = 71.2 bits (173), Expect = 1e-10 Identities = 34/50 (68%), Positives = 39/50 (78%) Frame = -1 Query: 372 YVFPRGLEKAAINRVSLILPTRKEVHEILFPFCRDQSIASRRTKNAWSLS 223 + FP GLEKAAINR+ LILP+RKE EILFPF RDQ I S R KNAW ++ Sbjct: 34 HAFPGGLEKAAINRIFLILPSRKEEREILFPFRRDQEIGSSRKKNAWLIN 83 >emb|CAF28642.1| ycf68 [Nymphaea alba] gi|50250389|emb|CAF28655.1| ycf68 [Nymphaea alba] Length = 101 Score = 62.0 bits (149), Expect = 8e-08 Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 2/49 (4%) Frame = -1 Query: 372 YVFPRGLEKAAINRVSLILPT--RKEVHEILFPFCRDQSIASRRTKNAW 232 + FP GLEKAAINR+SLI P+ RKE EILFPF DQ I S KNAW Sbjct: 51 HAFPGGLEKAAINRISLIFPSRKRKEEREILFPFRGDQEIGSSHKKNAW 99