BLASTX nr result

ID: Coptis25_contig00002292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002292
         (1591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup5...   434   e-119
ref|XP_004135312.1| PREDICTED: uncharacterized protein LOC101211...   428   e-117
ref|XP_002514932.1| conserved hypothetical protein [Ricinus comm...   427   e-117
emb|CBI27624.3| unnamed protein product [Vitis vinifera]              426   e-116
ref|XP_002314540.1| predicted protein [Populus trichocarpa] gi|2...   421   e-115

>ref|XP_002279552.1| PREDICTED: nuclear pore complex protein Nup54-like [Vitis vinifera]
          Length = 371

 Score =  434 bits (1117), Expect = e-119
 Identities = 232/345 (67%), Positives = 251/345 (72%), Gaps = 14/345 (4%)
 Frame = +3

Query: 63   FGTPSTPAFGGXXXXXXXXXXXXXXXXXXXXX--------------GFGFQTPQTSSLFN 200
            FGTPSTP+F                                     GFG+QTP  +    
Sbjct: 39   FGTPSTPSFASGFGSSLFSTPFSQPQPQPQPQQQQQTPFFQQPSSSGFGYQTPFAAP--- 95

Query: 201  ITXXXXXXXXXXXXXXITTQMAPISPLPFSLPDRDIQAIVDAYKDEPGNPKYAFKHLLFS 380
                            +TTQMAP++PLPFSL DRD+QAIV+AY+DEPGNPKYAFKHLLFS
Sbjct: 96   ---------QSTPAPQLTTQMAPVAPLPFSLADRDVQAIVEAYRDEPGNPKYAFKHLLFS 146

Query: 381  VTDPAARTKPAGISDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKLQDEVMLS 560
            VTDP  R KPAG SDIMWAEAM KLEGMES+DRERLWPQLVQGFKDLSQRLKLQDEV+LS
Sbjct: 147  VTDPQFRVKPAGASDIMWAEAMGKLEGMESSDRERLWPQLVQGFKDLSQRLKLQDEVILS 206

Query: 561  DAERLRMTQSNVKMLQRHFQADTLPWIQRMRQNEQSLQRRLLRVMRIVEALEGKGCRVPL 740
            DAERLRMTQSNVK+LQRHFQADTLPWIQRMRQ EQ LQRRLLRVMRIVEALEGKG R+PL
Sbjct: 207  DAERLRMTQSNVKLLQRHFQADTLPWIQRMRQKEQGLQRRLLRVMRIVEALEGKGYRLPL 266

Query: 741  MKGEAELAEKLASLTMQLKGSGAEXXXXXXXXXXXXXXXANGIGGGNSIYLPGSTKIHEQ 920
            MKGE EL EKLA++T QLKGSGAE               AN IGGG S+YLPGSTKIHEQ
Sbjct: 267  MKGEVELVEKLAAITRQLKGSGAELSRRVQNLLTISRVQANAIGGGGSVYLPGSTKIHEQ 326

Query: 921  SLVDMQEVLQLQTEAIARLGNVLKRDIRDIEIIMGEDTEMAEEVN 1055
            SL DMQEVLQ QTEAIARLGNVLKRD RD+EIIM EDTEM ++ N
Sbjct: 327  SLADMQEVLQQQTEAIARLGNVLKRDSRDMEIIMSEDTEMTQDGN 371


>ref|XP_004135312.1| PREDICTED: uncharacterized protein LOC101211067 [Cucumis sativus]
            gi|449494920|ref|XP_004159683.1| PREDICTED:
            uncharacterized LOC101211067 [Cucumis sativus]
          Length = 389

 Score =  428 bits (1100), Expect = e-117
 Identities = 221/299 (73%), Positives = 241/299 (80%)
 Frame = +3

Query: 159  GFGFQTPQTSSLFNITXXXXXXXXXXXXXXITTQMAPISPLPFSLPDRDIQAIVDAYKDE 338
            GFGFQTP T+                    +TTQMAP++PLPFSL DRDIQAIV+AYKD+
Sbjct: 101  GFGFQTPFTAP----------QSTPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDD 150

Query: 339  PGNPKYAFKHLLFSVTDPAARTKPAGISDIMWAEAMAKLEGMESADRERLWPQLVQGFKD 518
             GNPKYAFKHLLFSVTDP  RTKP G+SDIMWAEAMAKLEGMESADRERLWPQLVQGFKD
Sbjct: 151  AGNPKYAFKHLLFSVTDPQYRTKPPGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKD 210

Query: 519  LSQRLKLQDEVMLSDAERLRMTQSNVKMLQRHFQADTLPWIQRMRQNEQSLQRRLLRVMR 698
            LSQRLK+QDEV+LSD+ERLRMTQSNVKMLQRHF ADTLPW+QR++Q EQ LQR LLRVMR
Sbjct: 211  LSQRLKIQDEVILSDSERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRHLLRVMR 270

Query: 699  IVEALEGKGCRVPLMKGEAELAEKLASLTMQLKGSGAEXXXXXXXXXXXXXXXANGIGGG 878
            IVEALE KGCRVP+MKGEAELAEKLA +T QLKGSGAE               ANG G G
Sbjct: 271  IVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTVTRGQANGSGPG 330

Query: 879  NSIYLPGSTKIHEQSLVDMQEVLQLQTEAIARLGNVLKRDIRDIEIIMGEDTEMAEEVN 1055
            NSIY  GS KIHEQSL DMQEVLQ QTEAIARLGNVLKRD+RD+EIIM ED EMA++ +
Sbjct: 331  NSIYFQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMADDAS 389


>ref|XP_002514932.1| conserved hypothetical protein [Ricinus communis]
            gi|223545983|gb|EEF47486.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 395

 Score =  427 bits (1099), Expect = e-117
 Identities = 233/344 (67%), Positives = 259/344 (75%), Gaps = 12/344 (3%)
 Frame = +3

Query: 60   AFGTPSTPAF--GGXXXXXXXXXXXXXXXXXXXXXG----FGFQTP------QTSSLFNI 203
            AFGTPSTP+F  GG                          F  QTP      QT +LF  
Sbjct: 56   AFGTPSTPSFAAGGFGSSLFSTPFSAQTQQQQQQQQQTPFFSQQTPSIGLGFQTGTLFTA 115

Query: 204  TXXXXXXXXXXXXXXITTQMAPISPLPFSLPDRDIQAIVDAYKDEPGNPKYAFKHLLFSV 383
                           +TTQMAP++PLPFSL DRDIQAIVDAYK++PGNPKYAFK+LLFSV
Sbjct: 116  NQTTTPFPNTQ----LTTQMAPVAPLPFSLCDRDIQAIVDAYKEDPGNPKYAFKYLLFSV 171

Query: 384  TDPAARTKPAGISDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKLQDEVMLSD 563
            TDP  R KPAG+SDIMWAEAMAKLEGMES+DRERLWPQLVQGFKDLS RLKLQDEV++SD
Sbjct: 172  TDPQHRVKPAGVSDIMWAEAMAKLEGMESSDRERLWPQLVQGFKDLSNRLKLQDEVIVSD 231

Query: 564  AERLRMTQSNVKMLQRHFQADTLPWIQRMRQNEQSLQRRLLRVMRIVEALEGKGCRVPLM 743
            AERLRMTQSNVKMLQRHFQA+TLP I+RMRQ EQSLQRRLLR+MRI+EALEGKG R+PLM
Sbjct: 232  AERLRMTQSNVKMLQRHFQAETLPRIERMRQKEQSLQRRLLRIMRIMEALEGKGYRMPLM 291

Query: 744  KGEAELAEKLASLTMQLKGSGAEXXXXXXXXXXXXXXXANGIGGGNSIYLPGSTKIHEQS 923
            KGE ELAEKLA++T QLKGSGAE               AN +G G SIYLPGSTKIHEQS
Sbjct: 292  KGETELAEKLAAITRQLKGSGAELSRRVQNLLTVSRIQANALGAGGSIYLPGSTKIHEQS 351

Query: 924  LVDMQEVLQLQTEAIARLGNVLKRDIRDIEIIMGEDTEMAEEVN 1055
            L DMQEVLQ QTEAIARLGNVLKRD+RD+EIIM EDTEM+++V+
Sbjct: 352  LADMQEVLQQQTEAIARLGNVLKRDMRDMEIIMAEDTEMSQDVS 395


>emb|CBI27624.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  426 bits (1094), Expect = e-116
 Identities = 215/265 (81%), Positives = 230/265 (86%)
 Frame = +3

Query: 261  MAPISPLPFSLPDRDIQAIVDAYKDEPGNPKYAFKHLLFSVTDPAARTKPAGISDIMWAE 440
            MAP++PLPFSL DRD+QAIV+AY+DEPGNPKYAFKHLLFSVTDP  R KPAG SDIMWAE
Sbjct: 1    MAPVAPLPFSLADRDVQAIVEAYRDEPGNPKYAFKHLLFSVTDPQFRVKPAGASDIMWAE 60

Query: 441  AMAKLEGMESADRERLWPQLVQGFKDLSQRLKLQDEVMLSDAERLRMTQSNVKMLQRHFQ 620
            AM KLEGMES+DRERLWPQLVQGFKDLSQRLKLQDEV+LSDAERLRMTQSNVK+LQRHFQ
Sbjct: 61   AMGKLEGMESSDRERLWPQLVQGFKDLSQRLKLQDEVILSDAERLRMTQSNVKLLQRHFQ 120

Query: 621  ADTLPWIQRMRQNEQSLQRRLLRVMRIVEALEGKGCRVPLMKGEAELAEKLASLTMQLKG 800
            ADTLPWIQRMRQ EQ LQRRLLRVMRIVEALEGKG R+PLMKGE EL EKLA++T QLKG
Sbjct: 121  ADTLPWIQRMRQKEQGLQRRLLRVMRIVEALEGKGYRLPLMKGEVELVEKLAAITRQLKG 180

Query: 801  SGAEXXXXXXXXXXXXXXXANGIGGGNSIYLPGSTKIHEQSLVDMQEVLQLQTEAIARLG 980
            SGAE               AN IGGG S+YLPGSTKIHEQSL DMQEVLQ QTEAIARLG
Sbjct: 181  SGAELSRRVQNLLTISRVQANAIGGGGSVYLPGSTKIHEQSLADMQEVLQQQTEAIARLG 240

Query: 981  NVLKRDIRDIEIIMGEDTEMAEEVN 1055
            NVLKRD RD+EIIM EDTEM ++ N
Sbjct: 241  NVLKRDSRDMEIIMSEDTEMTQDGN 265


>ref|XP_002314540.1| predicted protein [Populus trichocarpa] gi|222863580|gb|EEF00711.1|
            predicted protein [Populus trichocarpa]
          Length = 270

 Score =  421 bits (1081), Expect = e-115
 Identities = 211/262 (80%), Positives = 231/262 (88%)
 Frame = +3

Query: 249  ITTQMAPISPLPFSLPDRDIQAIVDAYKDEPGNPKYAFKHLLFSVTDPAARTKPAGISDI 428
            +TTQMAP++PLPFSL DRDIQAIVDAYK+EPGNPKYAFK+LL SVTDP  R KPAG+S+I
Sbjct: 9    LTTQMAPVAPLPFSLADRDIQAIVDAYKEEPGNPKYAFKYLLLSVTDPQHRVKPAGVSEI 68

Query: 429  MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKLQDEVMLSDAERLRMTQSNVKMLQ 608
            MWAEAMAKLEGM+SADRERLWPQLVQGFKDLS RLKLQDEV++SDAERLRMTQSNVKMLQ
Sbjct: 69   MWAEAMAKLEGMDSADRERLWPQLVQGFKDLSNRLKLQDEVIVSDAERLRMTQSNVKMLQ 128

Query: 609  RHFQADTLPWIQRMRQNEQSLQRRLLRVMRIVEALEGKGCRVPLMKGEAELAEKLASLTM 788
            RHFQA+TLPWI+RMRQ EQSLQRRLLRVMRI+EALEGKGCR+PL KGEAELAEKL ++  
Sbjct: 129  RHFQAETLPWIERMRQKEQSLQRRLLRVMRIMEALEGKGCRLPLTKGEAELAEKLVAIIR 188

Query: 789  QLKGSGAEXXXXXXXXXXXXXXXANGIGGGNSIYLPGSTKIHEQSLVDMQEVLQLQTEAI 968
            QLKGSGAE               ANGIG G S+YLPGSTKIHE+SL DMQEVLQ QTEAI
Sbjct: 189  QLKGSGAEFSRRVHNLLTVSRVQANGIGAGGSLYLPGSTKIHEESLADMQEVLQQQTEAI 248

Query: 969  ARLGNVLKRDIRDIEIIMGEDT 1034
            ARLGNVLKRDIRD+EI+M EDT
Sbjct: 249  ARLGNVLKRDIRDMEIMMAEDT 270


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