BLASTX nr result

ID: Coptis25_contig00002289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002289
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274031.1| PREDICTED: arogenate dehydrogenase 1, chloro...    64   1e-08
emb|CAN64032.1| hypothetical protein VITISV_028158 [Vitis vinifera]    64   1e-08
ref|XP_002312190.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
gb|AFK44892.1| unknown [Medicago truncatula]                           62   5e-08
ref|XP_003616719.1| Arogenate dehydrogenase [Medicago truncatula...    62   5e-08

>ref|XP_002274031.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic [Vitis
           vinifera] gi|297736539|emb|CBI25410.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -2

Query: 492 KDDIVKNSFDLYSGLFVHNRFAKQELNNLEIALETIKEKL 373
           KD  +++SFDLYSGLFVHN+FAKQELNNL +A E +K+KL
Sbjct: 219 KDSTIRDSFDLYSGLFVHNKFAKQELNNLVLAFEKVKQKL 258


>emb|CAN64032.1| hypothetical protein VITISV_028158 [Vitis vinifera]
          Length = 245

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -2

Query: 492 KDDIVKNSFDLYSGLFVHNRFAKQELNNLEIALETIKEKL 373
           KD  +++SFDLYSGLFVHN+FAKQELNNL +A E +K+KL
Sbjct: 192 KDSTIRDSFDLYSGLFVHNKFAKQELNNLVLAFEKVKQKL 231


>ref|XP_002312190.1| predicted protein [Populus trichocarpa] gi|222852010|gb|EEE89557.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/46 (63%), Positives = 39/46 (84%)
 Frame = -2

Query: 492 KDDIVKNSFDLYSGLFVHNRFAKQELNNLEIALETIKEKLLDKVTE 355
           K+  +K+S DL+SGLFV+NRFAKQEL NLE++LE +K+ L DK+TE
Sbjct: 228 KESTMKDSSDLFSGLFVYNRFAKQELKNLELSLEKVKQMLQDKMTE 273


>gb|AFK44892.1| unknown [Medicago truncatula]
          Length = 266

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = -2

Query: 492 KDDIVKNSFDLYSGLFVHNRFAKQELNNLEIALETIKEKLLDKVTE 355
           K+  +++SFDLYSGLFVHNRFAKQEL NL+ AL+ +KE L+ ++ E
Sbjct: 214 KNTTMRDSFDLYSGLFVHNRFAKQELENLQRALDRVKEMLVQRMRE 259


>ref|XP_003616719.1| Arogenate dehydrogenase [Medicago truncatula]
           gi|355518054|gb|AES99677.1| Arogenate dehydrogenase
           [Medicago truncatula]
          Length = 266

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = -2

Query: 492 KDDIVKNSFDLYSGLFVHNRFAKQELNNLEIALETIKEKLLDKVTE 355
           K+  +++SFDLYSGLFVHNRFAKQEL NL+ AL+ +KE L+ ++ E
Sbjct: 214 KNTTMRDSFDLYSGLFVHNRFAKQELENLQRALDRVKEMLVQRMRE 259


Top