BLASTX nr result
ID: Coptis25_contig00002285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00002285 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528788.1| PREDICTED: exportin-2-like [Glycine max] 65 3e-12 ref|XP_003548351.1| PREDICTED: exportin-2-like isoform 1 [Glycin... 65 4e-12 ref|XP_002880249.1| hypothetical protein ARALYDRAFT_904119 [Arab... 74 9e-12 ref|XP_004170488.1| PREDICTED: LOW QUALITY PROTEIN: exportin-2-l... 65 1e-11 ref|XP_004133808.1| PREDICTED: exportin-2-like [Cucumis sativus] 65 1e-11 >ref|XP_003528788.1| PREDICTED: exportin-2-like [Glycine max] Length = 962 Score = 65.1 bits (157), Expect(2) = 3e-12 Identities = 35/67 (52%), Positives = 45/67 (67%) Frame = +2 Query: 68 PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247 P+LLD +A+ G+M+DSIVTLLS MPDI E GY+ TFV L+NAG KK Sbjct: 846 PVLLDPAASVSWGKMVDSIVTLLSRPEEDRVQEEPDMPDITENAGYSTTFVLLYNAG-KK 904 Query: 248 DEDPVKE 268 +EDP+K+ Sbjct: 905 EEDPLKD 911 Score = 31.2 bits (69), Expect(2) = 3e-12 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = +3 Query: 21 ELKLTSVASTKLICES 68 ELKLT+VAST+LICES Sbjct: 830 ELKLTAVASTRLICES 845 >ref|XP_003548351.1| PREDICTED: exportin-2-like isoform 1 [Glycine max] gi|356560137|ref|XP_003548352.1| PREDICTED: exportin-2-like isoform 2 [Glycine max] Length = 962 Score = 65.1 bits (157), Expect(2) = 4e-12 Identities = 35/67 (52%), Positives = 45/67 (67%) Frame = +2 Query: 68 PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247 P+LLD +A+ G+M+DSIVTLLS MPDI E GY+ TFV L+NAG KK Sbjct: 846 PVLLDPAASVSWGKMVDSIVTLLSRPEEDRVQEEPDMPDITENAGYSTTFVLLYNAG-KK 904 Query: 248 DEDPVKE 268 +EDP+K+ Sbjct: 905 EEDPLKD 911 Score = 30.8 bits (68), Expect(2) = 4e-12 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 21 ELKLTSVASTKLICES 68 ELKLT+VAST+L+CES Sbjct: 830 ELKLTAVASTRLVCES 845 >ref|XP_002880249.1| hypothetical protein ARALYDRAFT_904119 [Arabidopsis lyrata subsp. lyrata] gi|297326088|gb|EFH56508.1| hypothetical protein ARALYDRAFT_904119 [Arabidopsis lyrata subsp. lyrata] Length = 972 Score = 74.3 bits (181), Expect = 9e-12 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Frame = +2 Query: 8 LLLG*VEVDFGCFNQTYL*--VPLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMP 181 L++G +EV T L P LLD SAA + G+MLDSIVTL+S MP Sbjct: 834 LIMGSIEVKLTAVAATRLICETPALLDPSAAKLWGKMLDSIVTLVSRPEQERVLDEPEMP 893 Query: 182 DIGEAVGYTATFVPLHNAGKKKDEDPVKE 268 +I E VGYTA FV LHNAG KK+EDP+K+ Sbjct: 894 EISENVGYTAAFVNLHNAG-KKEEDPLKD 921 >ref|XP_004170488.1| PREDICTED: LOW QUALITY PROTEIN: exportin-2-like [Cucumis sativus] Length = 977 Score = 64.7 bits (156), Expect(2) = 1e-11 Identities = 36/67 (53%), Positives = 44/67 (65%) Frame = +2 Query: 68 PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247 P LLD + G+MLDSIVTLLS MPDI E VGY+A+FV L+NAGKK+ Sbjct: 861 PALLDPAFVEDWGKMLDSIVTLLSRPEQERVDEEPEMPDISENVGYSASFVRLYNAGKKE 920 Query: 248 DEDPVKE 268 D DP+K+ Sbjct: 921 D-DPLKD 926 Score = 29.6 bits (65), Expect(2) = 1e-11 Identities = 13/15 (86%), Positives = 15/15 (100%) Frame = +3 Query: 21 ELKLTSVASTKLICE 65 ELKLT+VAST+LICE Sbjct: 845 ELKLTAVASTRLICE 859 >ref|XP_004133808.1| PREDICTED: exportin-2-like [Cucumis sativus] Length = 977 Score = 64.7 bits (156), Expect(2) = 1e-11 Identities = 36/67 (53%), Positives = 44/67 (65%) Frame = +2 Query: 68 PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247 P LLD + G+MLDSIVTLLS MPDI E VGY+A+FV L+NAGKK+ Sbjct: 861 PALLDPAFVEDWGKMLDSIVTLLSRPEQERVDEEPEMPDISENVGYSASFVRLYNAGKKE 920 Query: 248 DEDPVKE 268 D DP+K+ Sbjct: 921 D-DPLKD 926 Score = 29.6 bits (65), Expect(2) = 1e-11 Identities = 13/15 (86%), Positives = 15/15 (100%) Frame = +3 Query: 21 ELKLTSVASTKLICE 65 ELKLT+VAST+LICE Sbjct: 845 ELKLTAVASTRLICE 859