BLASTX nr result

ID: Coptis25_contig00002285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002285
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528788.1| PREDICTED: exportin-2-like [Glycine max]           65   3e-12
ref|XP_003548351.1| PREDICTED: exportin-2-like isoform 1 [Glycin...    65   4e-12
ref|XP_002880249.1| hypothetical protein ARALYDRAFT_904119 [Arab...    74   9e-12
ref|XP_004170488.1| PREDICTED: LOW QUALITY PROTEIN: exportin-2-l...    65   1e-11
ref|XP_004133808.1| PREDICTED: exportin-2-like [Cucumis sativus]       65   1e-11

>ref|XP_003528788.1| PREDICTED: exportin-2-like [Glycine max]
          Length = 962

 Score = 65.1 bits (157), Expect(2) = 3e-12
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = +2

Query: 68   PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247
            P+LLD +A+   G+M+DSIVTLLS            MPDI E  GY+ TFV L+NAG KK
Sbjct: 846  PVLLDPAASVSWGKMVDSIVTLLSRPEEDRVQEEPDMPDITENAGYSTTFVLLYNAG-KK 904

Query: 248  DEDPVKE 268
            +EDP+K+
Sbjct: 905  EEDPLKD 911



 Score = 31.2 bits (69), Expect(2) = 3e-12
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +3

Query: 21  ELKLTSVASTKLICES 68
           ELKLT+VAST+LICES
Sbjct: 830 ELKLTAVASTRLICES 845


>ref|XP_003548351.1| PREDICTED: exportin-2-like isoform 1 [Glycine max]
            gi|356560137|ref|XP_003548352.1| PREDICTED:
            exportin-2-like isoform 2 [Glycine max]
          Length = 962

 Score = 65.1 bits (157), Expect(2) = 4e-12
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = +2

Query: 68   PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247
            P+LLD +A+   G+M+DSIVTLLS            MPDI E  GY+ TFV L+NAG KK
Sbjct: 846  PVLLDPAASVSWGKMVDSIVTLLSRPEEDRVQEEPDMPDITENAGYSTTFVLLYNAG-KK 904

Query: 248  DEDPVKE 268
            +EDP+K+
Sbjct: 905  EEDPLKD 911



 Score = 30.8 bits (68), Expect(2) = 4e-12
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +3

Query: 21  ELKLTSVASTKLICES 68
           ELKLT+VAST+L+CES
Sbjct: 830 ELKLTAVASTRLVCES 845


>ref|XP_002880249.1| hypothetical protein ARALYDRAFT_904119 [Arabidopsis lyrata subsp.
            lyrata] gi|297326088|gb|EFH56508.1| hypothetical protein
            ARALYDRAFT_904119 [Arabidopsis lyrata subsp. lyrata]
          Length = 972

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 8    LLLG*VEVDFGCFNQTYL*--VPLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMP 181
            L++G +EV       T L    P LLD SAA + G+MLDSIVTL+S            MP
Sbjct: 834  LIMGSIEVKLTAVAATRLICETPALLDPSAAKLWGKMLDSIVTLVSRPEQERVLDEPEMP 893

Query: 182  DIGEAVGYTATFVPLHNAGKKKDEDPVKE 268
            +I E VGYTA FV LHNAG KK+EDP+K+
Sbjct: 894  EISENVGYTAAFVNLHNAG-KKEEDPLKD 921


>ref|XP_004170488.1| PREDICTED: LOW QUALITY PROTEIN: exportin-2-like [Cucumis sativus]
          Length = 977

 Score = 64.7 bits (156), Expect(2) = 1e-11
 Identities = 36/67 (53%), Positives = 44/67 (65%)
 Frame = +2

Query: 68   PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247
            P LLD +     G+MLDSIVTLLS            MPDI E VGY+A+FV L+NAGKK+
Sbjct: 861  PALLDPAFVEDWGKMLDSIVTLLSRPEQERVDEEPEMPDISENVGYSASFVRLYNAGKKE 920

Query: 248  DEDPVKE 268
            D DP+K+
Sbjct: 921  D-DPLKD 926



 Score = 29.6 bits (65), Expect(2) = 1e-11
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 21  ELKLTSVASTKLICE 65
           ELKLT+VAST+LICE
Sbjct: 845 ELKLTAVASTRLICE 859


>ref|XP_004133808.1| PREDICTED: exportin-2-like [Cucumis sativus]
          Length = 977

 Score = 64.7 bits (156), Expect(2) = 1e-11
 Identities = 36/67 (53%), Positives = 44/67 (65%)
 Frame = +2

Query: 68   PLLLDASAATICGRMLDSIVTLLSXXXXXXXXXXXXMPDIGEAVGYTATFVPLHNAGKKK 247
            P LLD +     G+MLDSIVTLLS            MPDI E VGY+A+FV L+NAGKK+
Sbjct: 861  PALLDPAFVEDWGKMLDSIVTLLSRPEQERVDEEPEMPDISENVGYSASFVRLYNAGKKE 920

Query: 248  DEDPVKE 268
            D DP+K+
Sbjct: 921  D-DPLKD 926



 Score = 29.6 bits (65), Expect(2) = 1e-11
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 21  ELKLTSVASTKLICE 65
           ELKLT+VAST+LICE
Sbjct: 845 ELKLTAVASTRLICE 859


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