BLASTX nr result

ID: Coptis25_contig00002284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002284
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464900.1| hypothetical protein SORBIDRAFT_01g028520 [S...   394   e-108
ref|NP_001065446.1| Os10g0569200 [Oryza sativa Japonica Group] g...   394   e-107
gb|EEE51441.1| hypothetical protein OsJ_32527 [Oryza sativa Japo...   394   e-107
gb|EEC67477.1| hypothetical protein OsI_34716 [Oryza sativa Indi...   394   e-107
ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation...   393   e-107

>ref|XP_002464900.1| hypothetical protein SORBIDRAFT_01g028520 [Sorghum bicolor]
           gi|241918754|gb|EER91898.1| hypothetical protein
           SORBIDRAFT_01g028520 [Sorghum bicolor]
          Length = 720

 Score =  394 bits (1012), Expect = e-108
 Identities = 185/217 (85%), Positives = 208/217 (95%)
 Frame = -3

Query: 652 NVISVYETETFTLIDKKSLKVQNVIDFSWSPTDPIIALFVPELGGGNQPAKVSLVQIPGK 473
           N+ISVYET TF+L+DKKSLKV+NV+DFSWSPTDPII+LFVPE+GGGNQPA+VSLVQIPGK
Sbjct: 342 NIISVYETNTFSLLDKKSLKVENVVDFSWSPTDPIISLFVPEMGGGNQPARVSLVQIPGK 401

Query: 472 EELRQKNLFSVSDCRMYWQSSGDYLAVMVARYTKTKKSTHTSFELFRIKERDIPIEVLEL 293
           EELRQKNLFSVSDC+MYWQ+SG+YLAV V RYTKTKKST+T FELFRIKERDIPIEVLEL
Sbjct: 402 EELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLEL 461

Query: 292 ENKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMRTSSNTDHVSKLTTIKGKQANALF 113
           ENKNDKIIAFAWEPKGHRFA+IHGD PRPD+SFY+MRT++NT+ VSKLTT+K KQANAL+
Sbjct: 462 ENKNDKIIAFAWEPKGHRFAIIHGDGPRPDVSFYTMRTANNTNRVSKLTTLKAKQANALY 521

Query: 112 WSPAGRFILLAGLKEFNGQLEFFDVDELETMQTGEHF 2
           WSPAGRFI+LAGLK FNGQLEF++VDELETM TGEHF
Sbjct: 522 WSPAGRFIVLAGLKGFNGQLEFYNVDELETMATGEHF 558


>ref|NP_001065446.1| Os10g0569200 [Oryza sativa Japonica Group]
           gi|19224988|gb|AAL86464.1|AC077693_3 putative eukaryotic
           initiation factor subunit [Oryza sativa Japonica Group]
           gi|31433598|gb|AAP55090.1| Eukaryotic translation
           initiation factor 3 subunit 9, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113639978|dbj|BAF27283.1| Os10g0569200 [Oryza sativa
           Japonica Group] gi|215695511|dbj|BAG90702.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 719

 Score =  394 bits (1011), Expect = e-107
 Identities = 188/217 (86%), Positives = 205/217 (94%)
 Frame = -3

Query: 652 NVISVYETETFTLIDKKSLKVQNVIDFSWSPTDPIIALFVPELGGGNQPAKVSLVQIPGK 473
           NVISVYETETF+L+DKKSLKV+NV+DF WSPTDPIIALFVPELGGGNQPA+VSLVQIPGK
Sbjct: 342 NVISVYETETFSLLDKKSLKVENVVDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPGK 401

Query: 472 EELRQKNLFSVSDCRMYWQSSGDYLAVMVARYTKTKKSTHTSFELFRIKERDIPIEVLEL 293
           EELRQKNLFSVSDC+MYWQ+SG+YLAV V RYTKTKKST+T FELFRIKERDIPIEVLEL
Sbjct: 402 EELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLEL 461

Query: 292 ENKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMRTSSNTDHVSKLTTIKGKQANALF 113
           +NKNDKIIAFAWEPKGHRFAVIHGD P+PDISFYSM+TS+N   VSKLTT+KGKQANALF
Sbjct: 462 DNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSKLTTLKGKQANALF 521

Query: 112 WSPAGRFILLAGLKEFNGQLEFFDVDELETMQTGEHF 2
           WSP GRFI+ AGLK FNGQLEF++VDELETM TGEHF
Sbjct: 522 WSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEHF 558


>gb|EEE51441.1| hypothetical protein OsJ_32527 [Oryza sativa Japonica Group]
          Length = 697

 Score =  394 bits (1011), Expect = e-107
 Identities = 188/217 (86%), Positives = 205/217 (94%)
 Frame = -3

Query: 652 NVISVYETETFTLIDKKSLKVQNVIDFSWSPTDPIIALFVPELGGGNQPAKVSLVQIPGK 473
           NVISVYETETF+L+DKKSLKV+NV+DF WSPTDPIIALFVPELGGGNQPA+VSLVQIPGK
Sbjct: 342 NVISVYETETFSLLDKKSLKVENVVDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPGK 401

Query: 472 EELRQKNLFSVSDCRMYWQSSGDYLAVMVARYTKTKKSTHTSFELFRIKERDIPIEVLEL 293
           EELRQKNLFSVSDC+MYWQ+SG+YLAV V RYTKTKKST+T FELFRIKERDIPIEVLEL
Sbjct: 402 EELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLEL 461

Query: 292 ENKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMRTSSNTDHVSKLTTIKGKQANALF 113
           +NKNDKIIAFAWEPKGHRFAVIHGD P+PDISFYSM+TS+N   VSKLTT+KGKQANALF
Sbjct: 462 DNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSKLTTLKGKQANALF 521

Query: 112 WSPAGRFILLAGLKEFNGQLEFFDVDELETMQTGEHF 2
           WSP GRFI+ AGLK FNGQLEF++VDELETM TGEHF
Sbjct: 522 WSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEHF 558


>gb|EEC67477.1| hypothetical protein OsI_34716 [Oryza sativa Indica Group]
          Length = 720

 Score =  394 bits (1011), Expect = e-107
 Identities = 188/217 (86%), Positives = 205/217 (94%)
 Frame = -3

Query: 652 NVISVYETETFTLIDKKSLKVQNVIDFSWSPTDPIIALFVPELGGGNQPAKVSLVQIPGK 473
           NVISVYETETF+L+DKKSLKV+NV+DF WSPTDPIIALFVPELGGGNQPA+VSLVQIPGK
Sbjct: 342 NVISVYETETFSLLDKKSLKVENVVDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPGK 401

Query: 472 EELRQKNLFSVSDCRMYWQSSGDYLAVMVARYTKTKKSTHTSFELFRIKERDIPIEVLEL 293
           EELRQKNLFSVSDC+MYWQ+SG+YLAV V RYTKTKKST+T FELFRIKERDIPIEVLEL
Sbjct: 402 EELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLEL 461

Query: 292 ENKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMRTSSNTDHVSKLTTIKGKQANALF 113
           +NKNDKIIAFAWEPKGHRFAVIHGD P+PDISFYSM+TS+N   VSKLTT+KGKQANALF
Sbjct: 462 DNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSKLTTLKGKQANALF 521

Query: 112 WSPAGRFILLAGLKEFNGQLEFFDVDELETMQTGEHF 2
           WSP GRFI+ AGLK FNGQLEF++VDELETM TGEHF
Sbjct: 522 WSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEHF 558


>ref|XP_004150392.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Cucumis sativus]
          Length = 718

 Score =  393 bits (1009), Expect = e-107
 Identities = 189/217 (87%), Positives = 206/217 (94%)
 Frame = -3

Query: 652 NVISVYETETFTLIDKKSLKVQNVIDFSWSPTDPIIALFVPELGGGNQPAKVSLVQIPGK 473
           NVISVYETETF+LIDKKSLKV+NV+DF WSPTDPIIALFVPELGGGNQPA+VSLVQIP K
Sbjct: 341 NVISVYETETFSLIDKKSLKVENVMDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPSK 400

Query: 472 EELRQKNLFSVSDCRMYWQSSGDYLAVMVARYTKTKKSTHTSFELFRIKERDIPIEVLEL 293
           EELRQKNLFSVSDC+MYWQS+GDYLAV V RYTKTKKST+T FELFRIKERDIPIEVLEL
Sbjct: 401 EELRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLEL 460

Query: 292 ENKNDKIIAFAWEPKGHRFAVIHGDSPRPDISFYSMRTSSNTDHVSKLTTIKGKQANALF 113
           ENKNDKIIAFAWEPKGHRFAVIHGD+PRPD+SFYSMR+++N+  VSKL T+KGKQANALF
Sbjct: 461 ENKNDKIIAFAWEPKGHRFAVIHGDNPRPDVSFYSMRSTNNSGRVSKLATLKGKQANALF 520

Query: 112 WSPAGRFILLAGLKEFNGQLEFFDVDELETMQTGEHF 2
           WSPAGRFI+LAGLK FNGQLEF++VDELETM T EHF
Sbjct: 521 WSPAGRFIILAGLKGFNGQLEFYNVDELETMATAEHF 557


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